Chroicocephalus ridibundus (black-headed gull): 134519798
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Entry
134519798 CDS
T10910
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crid03032
]
134519798 (PIF1)
03029 Mitochondrial biogenesis [BR:
crid03029
]
134519798 (PIF1)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134519798 (PIF1)
DNA replication proteins [BR:
crid03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
134519798 (PIF1)
Mitochondrial biogenesis [BR:
crid03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
134519798 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
Viral_helicase1
Herpes_Helicase
AAA_16
ABC_tran
AAA_7
Mg_chelatase
AAA
PhoH
Motif
Other DBs
NCBI-GeneID:
134519798
NCBI-ProteinID:
XP_063200504
LinkDB
All DBs
Position
8:13149017..13155725
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AA seq
607 aa
AA seq
DB search
MEAAELRCTVAVEQPLPGGQAPRRRVMRGAMVLLGRNELRQPVLRVVGGGGSAAAAALSF
VLAGDTVRLFTRFAGDGRAAVRVGPGGAQVLLSDCPPDALRRFLRLLRLKVVAGSRGAQR
VPRLLDRPPPAFALISPLQERDLLRGPGHLRGAEGRGERPEEVPRAERRPPVRLSAEQEV
VLGAVRSGKSIFFTGCAGTGKSFLLKKIVGSLPPKSTYATASTGVAACHIGGTTLHAFAG
IGSGKASLEQCIQLAERPGVRQHWLACQHLIIDEISMVDGKFFDRLEAVARAVRKRDEPF
GGIQLIICGDFLQLPPVCKANEETKFCFQSKSWRKCIHINMELTEVRRQTDKTFVSLLSA
VRLGRCTEEVTRLLMQTTTNRSERDGILATRLCTHKDDVEITNERRLQQLPGDVHTFEAL
DSDPMLVKLIDAQCPVGGRIELKLGAQVMLAKNLDVSQGLVNGARGVVAGFESEEKGLPK
VRFLCGVTQVIKMEKWVFKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVF
ESGQAYVALSRARSLAGLRVLDFDPKVVRADPSVLQFYRQLRRHQLLTQDSLHTHSGADE
KENWECS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggagctgcgctgcacggtggccgtggagcagccgctgccgggaggacag
gccccgcggcgccgcgtaatgcggggcgcgatggtgctgctgggccgcaacgagctgcgg
cagccagtgctgcgggtggtcggcggcggcggatcggcggcggcggcggcgctgagcttc
gtgctggccggtgacactgtgcggctcttcacgcggttcgctggcgacgggcgggcggcg
gtgcgggtgggtccgggaggcgcccaggtcttgctctccgactgccccccagacgccctg
cgccgcttcctccgcctcctgcggctcaaggtggtcgctgggtcgcgaggagcgcagcgc
gtcccccgcctgctggaccggccgccgccggccttcgccctcatcagcccgctgcaggag
cgagacctgctgcgcggccccggccacctccgcggcgccgaggggcggggggagcgccca
gaggaggtgccccgcgcagagagacggcccccggtgaggctctcggcggagcaggaggtg
gtgctgggcgccgtgaggagcgggaagagcatcttcttcaccggctgtgcagggaccggg
aagtcattcttgctgaagaagatcgtggggtccctccctccgaagagcacctatgctaca
gctagcacaggagtggcggcatgccatatcggtggtaccactctccacgcctttgcaggg
atcggctctgggaaggcatcgctggaacagtgcattcagctggcggagaggcctggggtg
cgccagcactggctggcctgccagcacttaattattgatgagatctcaatggtggacggc
aagttctttgataggctggaggcagtggcgagggctgtcagaaaacgggatgagcctttt
ggaggaattcagctaatcatctgtggggacttcttgcagctacccccagtctgcaaggct
aatgaagaaaccaagttctgcttccagtcaaaaagctggaggaaatgcatccacataaac
atggagctgactgaagtgcggagacagaccgacaagacctttgtctcactcctgagtgca
gtccgtttgggcaggtgcacagaggaggttaccaggctgctgatgcagaccactactaac
aggtctgagcgtgatgggatcctggctacgcggctctgcacccataaagatgatgtagaa
ataactaatgagagacgcttgcaacagctaccaggagacgtgcacacttttgaggctctg
gacagtgacccaatgctagtgaagttaattgatgctcagtgtcctgtgggtggtagaatt
gagctaaagcttggagctcaggtgatgctagctaagaatctggatgtgtctcaagggctg
gtgaatggggcacgaggagttgttgcaggatttgaaagtgaagagaaggggctgcctaag
gttagatttctctgtggggtcacacaggtcatcaaaatggagaaatgggtcttcaaagga
ccatcaggagttcacctgagtcgtcaacagttgcctttaaaattggcatgggccatttcc
attcacaagagtcagggcatgtctttagattgcgtggaaatctccctgtctcgtgtcttt
gaaagtgggcaggcttacgtagccctttcccgagcccgtagccttgcaggtctccgtgtt
ctggattttgacccgaaagtagtgagagctgatccttctgtgttgcagttctataggcag
ctgagacgtcaccagcttctaacccaggattccctacacacacattcaggtgctgatgag
aaggagaactgggaatgcagctga
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