Chroicocephalus ridibundus (black-headed gull): 134520055
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Entry
134520055 CDS
T10910
Symbol
PHGDH
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00260
Glycine, serine and threonine metabolism
crid00270
Cysteine and methionine metabolism
crid01100
Metabolic pathways
crid01200
Carbon metabolism
crid01230
Biosynthesis of amino acids
Module
crid_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134520055 (PHGDH)
00270 Cysteine and methionine metabolism
134520055 (PHGDH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crid04147
]
134520055 (PHGDH)
Enzymes [BR:
crid01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
134520055 (PHGDH)
1.1.1.399 2-oxoglutarate reductase
134520055 (PHGDH)
Exosome [BR:
crid04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134520055 (PHGDH)
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Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
134520055
NCBI-ProteinID:
XP_063201058
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Position
8:complement(31547075..31550943)
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AA seq
529 aa
AA seq
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MALGKLQKVLISDSLDPCCREILQAGGLRVQEKPGLSKEELLREIRDCDGLIVRSATKVT
ADVLEAAERLQVVGRAGTGVDNVDVEAATRKGVLVMNTPAGNSLSAAELTCGMILSLARQ
IPQAAASMKEGKWDRKKYMGMELNGKTLGVLGLGRIGREVATRMQAFGMKTIGYDPIITP
EVSATFGVEQLPLEQIWPRCDFITVHTPLLPSTTGLLNDSTFAKCRRGVQVVNCARGGIV
DEGALLRALQSGQCGGAALDVFTQEPPKDRELVNHPNVISCPHLGASTREAQSRCGKEIA
MQIVDMATGKGLAGVVNGQALSKAFAPQTKPWIALARALGTVLRTVGKKAQGSVQVCTLG
TPLQEAGSYLAPAVAAGMLAGGAQKEVTLVNAQLLAQEAGLKVTTTHSDVAPEPDGGTGL
LQVALQGTPYRATGTVQGSAPVLRELNGATFKQPAPLAGPVLIYRAKASEPSALPTLAGM
LGKVGVQLQSYHSSAIVAGEQWSLVGLSAPLSDLGELKPRVTEVFQLHL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggaagctgcagaaggtgctgatcagcgacagcctggacccctgctgccgg
gagatcctgcaggccggcgggctgcgggtgcaggagaagcccgggctgagcaaggaggag
ctgctgcgggagatccgggactgcgatgggctcatcgtccgctcggccaccaaagtcacg
gccgacgtgctggaggcggcggagaggctgcaggtggtgggcagagcgggcaccggcgtg
gacaacgtcgatgtggaggcagccaccaggaaaggtgtcctggtcatgaacacgcccgct
gggaacagcctcagtgccgccgagctcacctgtgggatgatcctgtccttggccaggcaa
atcccgcaggcagctgcctccatgaaggagggcaagtgggaccgtaagaagtacatgggc
atggagctgaacgggaagacgctgggcgtgctggggctggggcgcatcggcagggaggtg
gccacccgcatgcaggcttttggcatgaagaccataggctacgaccccatcatcaccccc
gaagtctcggccacctttggcgtggagcagctgccactggagcagatctggccccgctgc
gacttcatcacggtgcacacaccgctgctgccctccaccacggggctcctgaacgacagc
accttcgccaagtgccgccgcggcgtgcaggtggtgaactgtgcccgcggcggcatcgtg
gacgagggcgcgctgctgcgggcactgcagtcggggcagtgtggcggggctgccctcgat
gtctttacgcaggagcccccgaaggaccgtgagctggtgaaccaccccaacgtcatctcc
tgcccgcatctgggcgccagcacgcgggaggcgcagagccgctgcggcaaggagattgcc
atgcagatcgtggacatggccacagggaaggggctggctggcgtagtcaacgggcaggct
ctcagcaaggctttcgcgccccagaccaagccctggatagccctggccagggccctgggc
acggtgctgcgcacagtgggcaagaaagcacagggcagcgtgcaggtctgcaccctgggg
acacccctgcaggaagccggaagctacctggcgcccgccgtggccgcgggcatgctggct
ggcggggcgcagaaggaggtgaccctggtgaacgcccagctgctggcccaggaggctggg
ctgaaggtcacgaccacccacagcgacgtggcccccgagcccgatggcggcaccggcttg
ctgcaggtggccctgcagggcaccccgtaccgggcgacggggacggtgcagggcagtgcc
ccggtcctgcgggagctcaatggggccaccttcaagcagccggccccgctggccggcccc
gtcctcatctacagagccaaagcctccgagcccagcgcgctgcccacgcttgctgggatg
ctggggaaggtgggggtccagctccagtcctaccacagctctgccatcgtggcgggggag
cagtggagcctggtggggctctcggcccccctgtccgaccttggcgagctgaagccgcgc
gtcacggaggtcttccagctccacctgtag
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