Chroicocephalus ridibundus (black-headed gull): 134520073
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Entry
134520073 CDS
T10910
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
Brite
Enzymes [BR:
crid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
134520073 (PARN)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134520073 (PARN)
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GFIT
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NCBI-GeneID:
134520073
NCBI-ProteinID:
XP_063201089
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Position
8:45920080..45980246
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AA seq
577 aa
AA seq
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MDFLLFQFGLCTFKYDQTEEKYIMKSFNFYIFPKPFNRSSPDIKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERHLREQYDEKRSQANGAGSLAYTSPNATKCPVTIPEDQKKFI
EKVVEQIEDLLKNEENESLELEPCTGFQRKLIYQTLSWKYPKGIHVETLESDKKERYIVI
SKVNEEERKRREQQKQAKEQEELNDAVGFSRVVHAITNSGKLVIGHNMLLDVMHTIHQFC
CPLPDDLSEFKEVTSCVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEVPFSPPKVE
SAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKNHVSARSELIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTSA
FVSLSQPEQVQIAVNTSRYAESYRIQTYAEYVEKKHEEKQAKRKCTEDSWKEMERKRLKT
QCTPYVSPSRYYCVNSFTGTTTVGKRSMSPIQEETGSDDMEEGDSQDSEYDQTDSCADSL
PDGKKRARKFKKIKTEQVPAGTLTSSSTGIFEVPETW
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggactttttgctctttcagtttggcctttgcacttttaaatatgatcaaacagaagaa
aagtatataatgaagtcatttaatttctatatttttccaaaaccctttaacagaagttca
ccagatatcaagtttgtctgtcagagttcaagtatagattttttagcaaaccaaggattt
gattttaataaagtttttcgcaatggaattccgtatttaaatcaggaagaagaaagacat
ctaagggaacagtatgacgaaaaacgttctcaggccaatggtgcaggatctctagcatac
acttctcctaatgccacaaagtgtcctgtgacaattcctgaagatcagaaaaaattcatt
gagaaagtagtggaacagatagaagacttattaaagaatgaagaaaatgaaagtttggaa
ctggagccatgtacaggatttcagaggaaattaatttatcagaccttgagctggaagtat
ccaaaaggtatccatgttgaaactctggagtcggataagaaggagagatatattgttatt
agtaaggtaaatgaagaagaacgaaaaagaagagaacagcagaaacaagcaaaagaacag
gaagaattgaatgatgcagtaggattttccagagtcgttcatgccatcactaattctggc
aagcttgttattgggcacaatatgctactggatgttatgcataccatacaccagttctgt
tgtcccctacctgatgacctaagtgagttcaaggaagtaacatcatgtgtctttcctcgg
ctattggatactaaactgatggcaagcacacaaccttttaaggagatcattaataataca
tcccttgcagaactggaaaagcgtttaaaagaggttccattcagccctcctaaagttgaa
agtgcagaagggtttccaagttatgatacagcttctgaacaacttcatgaagcaggatat
gatgcctacattactggactgtgcttcatctccatggctaatttcctgggttcattcctc
agtcctccgaaaaaccatgtgtctgctagatcagaactcattgaacctttttttaacaag
ctatttcttatgagagtaatggacataccgtatctcaatttggaaggaccagacttgcag
ccaaaacgagatcatgttcttcatgttacttttccaaaagagtggaagactagtgacctt
taccagcttttcagtgcctttggtaacattcaggtttcgtggattgatgatacatcagca
tttgtatcactgagccagccagaacaagtacaaatagctgtaaacaccagcaggtatgct
gaaagttataggatccagacatatgcagaatatgttgagaaaaaacatgaagaaaaacaa
gcaaagagaaaatgtacagaagatagttggaaggagatggagagaaagcggttaaaaact
caatgcacaccttacgtttccccgagtcgatactactgtgttaacagttttacaggtacc
actacagtgggaaagagaagcatgagtcctattcaggaagaaactggttctgatgatatg
gaagagggagacagccaagattcagaatatgatcagacagactcctgcgcagactccctt
ccagatggtaagaagagagccagaaagttcaaaaagatcaagacagaacaagttccagca
ggaactctcacaagtagttccactggaatttttgaagtccctgaaacatggtag
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