Entry |
|
Symbol |
MSH4
|
Name |
(RefSeq) mutS protein homolog 4
|
KO |
K08740 | DNA mismatch repair protein MSH4 |
|
Organism |
crid Chroicocephalus ridibundus (black-headed gull)
|
Brite |
KEGG Orthology (KO) [BR:crid00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:crid03036]
134520131 (MSH4)
Chromosome and associated proteins [BR:crid03036]
Eukaryotic type
Meiosis-specific proteins
Others
134520131 (MSH4)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:complement(92267..125887)
|
AA seq |
932 aa
MLGESSEGNASGRAAASESYTGRGSSTSVQGGRVERVPRYTLGLLQTPHSSADSTGGCSS
GGEGRAPGRAPCGSGAKPPVPGRGESYFGDKSSCVENASTLNFTSSSSVRGLNSTCIGKT
PLSSSRSVCRSRTPLMGYSVTSSSAVSAHSVASVIVAVVEGRGLARGEVGMASIDLKNPE
VILSQFADNTTYAKVITKLKILTPLEIIMSNTACDVGNATKLFSLITEHFKNVTFTTVQR
KYFNETKGLEYIEQLCASEFSTVFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVR
FQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDA
ETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKAAESKITNLI
YLKHTLELVEPLKAALRSCNTPLLKAYYSSLEDTRFGIILEKITTVINDDTRYTKGCLSM
RTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSTRGFFIQMN
VDCSTLPSGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNE
IYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAMEKP
VSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTR
IGMDDDIETNASTFMKEMKEITYIMQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLL
NLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYTYMLSKGYTEEKN
YGLKAAEVSSLPSAVILDAKEITNHIAKQILHRQKSTPEMMKQRAVYHLAMRLVQTARNS
RLDPDSLRIYLKGLKKKYEASCPAPRQNDEQQ |
NT seq |
2799 nt +upstreamnt +downstreamnt
atgctgggagaaagcagcgaggggaacgcgagcgggcgggcggccgcctcagagtcctat
acgggccgcggctcttccacctcggtgcagggcgggcgagtggagcgggtgccccgctac
actctcgggctgctgcagacgccgcacagctcggccgacagcaccggcggctgctccagc
ggcggcgaaggccgtgctcccggccgggctccctgtggcagtggggcgaagccgccggtt
cctggaagaggagaatcatattttggggacaaaagttcttgtgtagaaaatgctagcaca
ttgaatttcaccagttcttcttctgtgcgaggcctcaatagcacatgtataggaaaaaca
cctctctcttccagtagatctgtttgcagaagccgtacccctcttatgggatattcagtt
acatcctcatctgcagtctctgctcacagtgttgcttcggttattgtggctgtagtagaa
ggaagaggccttgccagaggtgaagtaggaatggccagtattgacttaaaaaatcctgag
gtgatactatcacagtttgcagacaatacgacttatgccaaggttattactaaactcaag
attttaacaccactggaaataataatgtcaaacactgcttgtgatgtaggaaacgcaaca
aaattgttcagtctgataacagagcatttcaagaatgtgacttttacaactgtccaaaga
aaatacttcaatgaaacaaagggtttggaatacatagaacaattgtgtgcatctgaattc
agcaccgttttcatggaggttcaatcaaagtactactgtcttgcagctgctgcagctttg
ctaaaatatgttgaatttattcaaaattcagtttatgctcctaaatcactcaaggtgcgt
ttccagggaagcgagaaaacagctatgatagattcatcatcagcgcaaaatcttgaacta
gtaattaataacagagattctcggaatggtcacacgctttttggtgtcctaaactacact
aaaactccaggtggaagtcgaagacttagatccaatatcctggagccactagttgatgct
gaaacaattaacacgagactggactgtgttcaggagttactccaggatgaggagctcttt
tttggtcttcaagcagttatctcaaaattcctggatacagaacaactactttcagttttg
gtacaaattccaaagcaagatacagttaaagctgctgaatcaaaaataacgaatttaatc
tacctgaagcatactctagaacttgtggagcctctaaaagctgctttaagaagctgtaac
acacctctgctaaaagcttattacagttctcttgaagatacaagatttggaattatactt
gagaagattacaactgtcattaatgatgatacaaggtacacaaaaggatgtctgagtatg
aggacccagaaatgctatgctgttaagcctaacatcaatgaattccttgacatagctcgc
agaacatacacagaaattgttgatgacatagcaggtatgataacacaacttgcagaaaag
tacaacctaccaatgaaaacaagtttcagctctacacgtgggttttttatccagatgaat
gttgattgttcaacattacccagtggccaacttccttcagaatttacaaagatcactaaa
atgaaaaacacatacagcttcacttcagcagatttaataaaaatgaatgaaagatgtcag
gagtccctgagagagatatatcacatgacctacttaatagtgtgtaaactactgaatgag
atttatgaacacattcattgcctttacaagctgtctgacattgtgtcaatgctggatatg
ctgctttcatttgcccatgcctgcactctttctgattatgttcgtccagaatttacggat
actttagcaatcaagcagggatggcatcccattcttgaaaagatagctatggaaaaacct
gtgtctaacaacacgtatctgacagagggtaacaattttgtcattattacaggaccaaat
atgagtggaaaatcaacatacctaaaacagattgctctctgtcaaattatggcacagatt
ggttcttatgtcccagcagagtattgttcttttcgaattgcagagcaaatttttaccaga
ataggtatggatgatgatatagaaacaaatgcatcaacattcatgaaggaaatgaaagag
ataacatacatcatgcaaaatgctaatgacaaatcactcatcataattgacgaacttggc
agaggtaccagtgctgaagaaggtattggcatttgttatgctgcctgtgaatatctcttg
aatttaaaggcatttacattgtttgctacgcatttcctggaactgtgtcatatagatgct
ttatatcccaatgtggaaaattaccattttgaagtgcaacatgtgagaagcagtgctgga
aataaggagaaaattgcttacacttacatgctctctaaaggatatacagaggaaaagaac
tatggattaaaagctgcagaagtttcctcactgccatcagccgtaattctggatgcaaag
gaaatcacaaatcatattgcaaaacaaattttgcacaggcagaagagcactcctgagatg
atgaaacagagagccgtataccatttagcaatgagactggttcagactgccagaaattct
cgactggacccagacagtttgcgtatatatttgaaaggcttgaagaaaaagtatgaagcc
agttgtcctgcacccagacaaaacgatgagcaacagtaa |