Chroicocephalus ridibundus (black-headed gull): 134520131
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Entry
134520131 CDS
T10910
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134520131 (MSH4)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134520131 (MSH4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_30
ATPase_2
AAA_28
AAA_18
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
134520131
NCBI-ProteinID:
XP_063201196
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Position
8:complement(92267..125887)
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AA seq
932 aa
AA seq
DB search
MLGESSEGNASGRAAASESYTGRGSSTSVQGGRVERVPRYTLGLLQTPHSSADSTGGCSS
GGEGRAPGRAPCGSGAKPPVPGRGESYFGDKSSCVENASTLNFTSSSSVRGLNSTCIGKT
PLSSSRSVCRSRTPLMGYSVTSSSAVSAHSVASVIVAVVEGRGLARGEVGMASIDLKNPE
VILSQFADNTTYAKVITKLKILTPLEIIMSNTACDVGNATKLFSLITEHFKNVTFTTVQR
KYFNETKGLEYIEQLCASEFSTVFMEVQSKYYCLAAAAALLKYVEFIQNSVYAPKSLKVR
FQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILEPLVDA
ETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKAAESKITNLI
YLKHTLELVEPLKAALRSCNTPLLKAYYSSLEDTRFGIILEKITTVINDDTRYTKGCLSM
RTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSTRGFFIQMN
VDCSTLPSGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNE
IYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAMEKP
VSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTR
IGMDDDIETNASTFMKEMKEITYIMQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLL
NLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYTYMLSKGYTEEKN
YGLKAAEVSSLPSAVILDAKEITNHIAKQILHRQKSTPEMMKQRAVYHLAMRLVQTARNS
RLDPDSLRIYLKGLKKKYEASCPAPRQNDEQQ
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgctgggagaaagcagcgaggggaacgcgagcgggcgggcggccgcctcagagtcctat
acgggccgcggctcttccacctcggtgcagggcgggcgagtggagcgggtgccccgctac
actctcgggctgctgcagacgccgcacagctcggccgacagcaccggcggctgctccagc
ggcggcgaaggccgtgctcccggccgggctccctgtggcagtggggcgaagccgccggtt
cctggaagaggagaatcatattttggggacaaaagttcttgtgtagaaaatgctagcaca
ttgaatttcaccagttcttcttctgtgcgaggcctcaatagcacatgtataggaaaaaca
cctctctcttccagtagatctgtttgcagaagccgtacccctcttatgggatattcagtt
acatcctcatctgcagtctctgctcacagtgttgcttcggttattgtggctgtagtagaa
ggaagaggccttgccagaggtgaagtaggaatggccagtattgacttaaaaaatcctgag
gtgatactatcacagtttgcagacaatacgacttatgccaaggttattactaaactcaag
attttaacaccactggaaataataatgtcaaacactgcttgtgatgtaggaaacgcaaca
aaattgttcagtctgataacagagcatttcaagaatgtgacttttacaactgtccaaaga
aaatacttcaatgaaacaaagggtttggaatacatagaacaattgtgtgcatctgaattc
agcaccgttttcatggaggttcaatcaaagtactactgtcttgcagctgctgcagctttg
ctaaaatatgttgaatttattcaaaattcagtttatgctcctaaatcactcaaggtgcgt
ttccagggaagcgagaaaacagctatgatagattcatcatcagcgcaaaatcttgaacta
gtaattaataacagagattctcggaatggtcacacgctttttggtgtcctaaactacact
aaaactccaggtggaagtcgaagacttagatccaatatcctggagccactagttgatgct
gaaacaattaacacgagactggactgtgttcaggagttactccaggatgaggagctcttt
tttggtcttcaagcagttatctcaaaattcctggatacagaacaactactttcagttttg
gtacaaattccaaagcaagatacagttaaagctgctgaatcaaaaataacgaatttaatc
tacctgaagcatactctagaacttgtggagcctctaaaagctgctttaagaagctgtaac
acacctctgctaaaagcttattacagttctcttgaagatacaagatttggaattatactt
gagaagattacaactgtcattaatgatgatacaaggtacacaaaaggatgtctgagtatg
aggacccagaaatgctatgctgttaagcctaacatcaatgaattccttgacatagctcgc
agaacatacacagaaattgttgatgacatagcaggtatgataacacaacttgcagaaaag
tacaacctaccaatgaaaacaagtttcagctctacacgtgggttttttatccagatgaat
gttgattgttcaacattacccagtggccaacttccttcagaatttacaaagatcactaaa
atgaaaaacacatacagcttcacttcagcagatttaataaaaatgaatgaaagatgtcag
gagtccctgagagagatatatcacatgacctacttaatagtgtgtaaactactgaatgag
atttatgaacacattcattgcctttacaagctgtctgacattgtgtcaatgctggatatg
ctgctttcatttgcccatgcctgcactctttctgattatgttcgtccagaatttacggat
actttagcaatcaagcagggatggcatcccattcttgaaaagatagctatggaaaaacct
gtgtctaacaacacgtatctgacagagggtaacaattttgtcattattacaggaccaaat
atgagtggaaaatcaacatacctaaaacagattgctctctgtcaaattatggcacagatt
ggttcttatgtcccagcagagtattgttcttttcgaattgcagagcaaatttttaccaga
ataggtatggatgatgatatagaaacaaatgcatcaacattcatgaaggaaatgaaagag
ataacatacatcatgcaaaatgctaatgacaaatcactcatcataattgacgaacttggc
agaggtaccagtgctgaagaaggtattggcatttgttatgctgcctgtgaatatctcttg
aatttaaaggcatttacattgtttgctacgcatttcctggaactgtgtcatatagatgct
ttatatcccaatgtggaaaattaccattttgaagtgcaacatgtgagaagcagtgctgga
aataaggagaaaattgcttacacttacatgctctctaaaggatatacagaggaaaagaac
tatggattaaaagctgcagaagtttcctcactgccatcagccgtaattctggatgcaaag
gaaatcacaaatcatattgcaaaacaaattttgcacaggcagaagagcactcctgagatg
atgaaacagagagccgtataccatttagcaatgagactggttcagactgccagaaattct
cgactggacccagacagtttgcgtatatatttgaaaggcttgaagaaaaagtatgaagcc
agttgtcctgcacccagacaaaacgatgagcaacagtaa
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