Chroicocephalus ridibundus (black-headed gull): 134520161
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Entry
134520161 CDS
T10910
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04510
Focal adhesion
crid04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134520161 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134520161 (LAMC1)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
134520161
NCBI-ProteinID:
XP_063201250
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Position
8:28159917..28226870
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AA seq
1602 aa
AA seq
DB search
MGGGGERLARALWLAALWLWLPGRCGGAMDECTEERSGRPQRCMPEFVNAAFNATVLATH
TCGTPAEEYCVQTGVTGVTQSCHLCDAAQPHLRHGAAFLTDYNSPADATWWQSRTMLAGV
QHPTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCESTYH
KVNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTAT
DIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNC
KHNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRSTGHGGHC
TGCSDNTDGAHCERCRDSFYRLGSEEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGEKC
DRCQPGFHSLSEAGCRPCSCDPAGSTGECNVETGRCTCKDNVEGFHCERCKPGFFHLDSS
NMRGCTPCFCFGHSSVCTNAVGYSIYSITSSFQFGEDEWRAEQRDGSEVLLQWSAETQDI
SVISDSYFPIYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVP
LIAQGNPYPSENAVTYTFRLHEATDYPWRPALTAFEFQKLLHNLTSIKIRGTYSERSAGH
LDDVTITSARPGPGVPVAWVESCSCPVGYEGQFCERCSSGYRRETPSLGPYSPCVPCACN
GHSETCEPETGMCNCRDNTAGSHCEKCSDGYYGDATAGTASDCQPCPCPGSSSCAIVPRT
KEVVCTSCQAGTTGKRCELCDDAYFGDPLGENGAVRPCRLCQCNDNIDPNAVGNCDRQTG
ECLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCRACHCNPYGTVNQQTSCNQVTGQCEC
LSHVMGRDCSACEPGFFNLQSGRGCERCNCHALGSTNGQCDIRTGQCECQPGVAGQRCDR
CEVNHFGFGSEGCKPCDCDPEGSRSLQCQENGRCECKEGFVGNRCDQCEENYFYNRSWPG
CQECPPCYRLVKDKVAEQRERLQELENLIANLGTGEDTVTDQAFEERLKQAERDVMELLQ
EAQNSKDVDQGLMDRLKNINSTLTSQLNRLRNIQGTVQETENLAEQARVRVEDTEDLISL
ASNMLEKAKMAADNVSITPPESSGDPNNMTLLAEEARKLAERHKKEADEIVRIAKAANDT
STEAYQLLLKTLAGENQTAKDIDELNQKYNQARNISRDLEKQASKVLAEAEEAGNKALQI
YANLTSLPTVDSTGLENEANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEK
GKTEQQTADQLLARADAAKALAEEAARKGNGTLQEANTILSNLKDFDKRVNDNKTAAEEA
LKKIPAITQTIAEANNKTRQAELALGNAAADAREAKAKADDAEKIAGSVQKSAAATKAEA
DKTFADVTGLAREVDDVMKQLQDAEKELKRKQDDAEQDMMMAGMASQAAQEAEDNARKAK
NSVNSLLAIINNLLDQLGQLETVDLNELNEIEGTLNSAKDQMKEKDLDQKVSFLEREARK
QDDAIQAYNRDIEEILKDISNLEDIKKTLPSGCFNTPSIEKP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcggcgagcgcctggcgcgggcgctgtggctggcggcgctgtggttgtgg
ttgcccgggcggtgcggcggcgccatggacgagtgcacggaggagcggagcggccgcccg
cagcgctgcatgcccgagttcgtcaacgccgccttcaacgccacggtgctggccacccac
acgtgcgggacgccggccgaggagtactgcgtgcagaccggcgtcaccggcgtcacccag
tcctgccacctctgcgacgccgcccagccccacctgcgccacggcgccgccttcctcacc
gactacaacagcccggccgacgccacctggtggcagagccgcaccatgctggccggcgtg
cagcaccccaccgccgtcaacctcaccctccacctgggaaaggcctttgacatcacgtac
gtgcgtctgaagtttcacaccagtcggccggagagctttgcaatctacaaacgcaccagg
gaagacggcccatgggtgccctaccagtattacagcggctcctgtgagagcacatatcac
aaagtcaaccggggctttattcggactggggaggatgagcagcaagctctctgcacagat
gagttcagtgacatctcccctctcactgggggcaacgtggcgttctcaacactggagggg
cgtcccagtgcctacaactttgacaacagccctgtgctacaggagtgggtgacggctaca
gatattagagtgaccctcaatcgtctgaacacctttggagatgaagttttcaacgatcca
aaagttctcaagtcttactactatgcgatttctgattttgctgtgggtggtagatgcaaa
tgtaacgggcacgcaagcgagtgtgtgaagaatgagcttgggaagctggtctgcaactgc
aaacacaacaccttcggggtcgactgtgaaaagtgccttcctttcttcaatgaccgtcca
tggaggagagcgacagcagagagcgccaatgaatgcttgccttgtgactgcaacgggagg
tcgcaggagtgctacttcgaccctgagctgtaccgctccactggccacgggggccactgc
acgggctgctcggataacaccgacggtgcccactgcgagaggtgcagggacagcttctat
cgcctgggcagcgaggagggatgcctgccctgcagctgcaaccctgtcggctccctcagc
acgcagtgcgacagctacggccagtgcagctgcaaacccggcgtgatgggtgagaagtgt
gaccgctgccagccgggtttccactccctctctgaagctgggtgcaggccctgttcttgt
gatccggctggcagcacaggggaatgcaatgtcgagacaggacggtgtacatgcaaggac
aacgttgaaggcttccactgcgagagatgtaaacctggttttttccatctggattcctcc
aatatgaggggctgtaccccctgcttctgctttggtcactcctcagtctgcaccaatgcc
gtcggctacagtatctatagtatcacctccagcttccagtttggagaggacgagtggcgt
gctgagcagcgtgatggctctgaagtcttacttcagtggagtgcagagacccaggatatc
tctgttatctcggacagctacttccccatctattttgttgcgccacgcaagttcttgggc
aaccaggttttgagttacgggcaaaacttgaccttctccttccgtgtggacagacgggac
acgcgcctctctgcggaggacctggtgctggaaggggctgggctgagagtgtcggtgcca
ctcattgcccagggcaacccctaccccagcgagaatgcagtgacctacaccttcaggctt
catgaggctacagattacccatggaggcctgctcttacggcatttgagttccagaagctt
ctccacaacttgacttccatcaagatccgcgggacgtatagcgagagaagtgctggccac
ctggatgatgttaccatcacaagcgctcgccctggaccaggtgtgcccgtggcctgggtg
gagagctgctcctgtcccgtgggatacgaggggcagttctgtgagcgctgctcatctgga
taccggcgagagacgccgagccttgggccctacagcccctgcgtgccttgtgcttgcaac
gggcacagcgagacatgtgagcccgagacaggcatgtgcaactgcagggataatacggcg
gggtctcactgtgagaagtgcagcgacgggtattatggggatgcgacagcgggcacggcc
tcagactgccagccctgcccgtgcccaggcagctcgagctgtgccatcgtgccccgcacg
aaagaggttgtgtgcaccagctgccaggctggcactacaggtaagaggtgcgagctttgt
gacgatgcctatttcggagacccactgggcgaaaacggtgctgtgaggccttgccgcctc
tgccagtgcaacgacaacatcgatcccaacgccgtgggcaactgcgaccgccagacgggc
gagtgcctcaagtgcatctacaacactgccggcttctactgcgaccgctgcaaagatggc
ttcttcgggaaccccctggcccccgatccggccgacaagtgcagggcttgtcactgcaat
ccctacggcactgtgaatcagcagacgagttgcaatcaagtgactgggcagtgcgagtgc
ctgtctcacgtcatgggaagggactgcagcgcctgtgagcctggcttcttcaacctccag
agcggacgcggctgtgagaggtgcaactgccatgcgctgggctccaccaacggccagtgt
gacatccgaactgggcagtgcgagtgccagcctggcgtcgctggacaacgttgcgacaga
tgcgaggtcaaccacttcggctttggctccgaaggctgtaaaccctgcgactgtgatccc
gagggttcgcgctccctgcagtgccaggagaacggtcgctgtgagtgcaaggaaggcttc
gtagggaaccgctgcgaccagtgtgaagagaactatttctacaaccgctcatggccgggc
tgccaagaatgtccgccctgttacagattggtgaaagacaaggtggcagaacaacgagag
aggttgcaggagctggaaaatcttatagcaaatctgggtacgggagaagacaccgtaacc
gatcaagcctttgaagagaggttgaagcaggcagaaagagatgttatggaattgctccag
gaagcacaaaacagcaaagacgtagatcagggcctcatggatcgcctcaaaaacatcaac
agcacactaacgagtcaactcaacaggctgaggaacatccagggcacggtgcaggagaca
gagaacctggcggagcaagcccgggtgcgggtggaggacaccgaggacctgatcagctta
gcttccaatatgcttgagaaagcaaagatggcagctgacaatgtgtccattacacctccg
gagtcaagcggggaccctaacaacatgactctattggcagaagaggcccgtaagctggct
gaaagacacaaaaaagaagctgatgagattgttcgcatagccaaggcagcaaatgatact
tccacagaagcatatcaactgctgctgaagaccctggcgggagaaaaccaaaccgcaaag
gacattgatgagctcaaccagaagtataatcaagcaaggaacatttctcgagacctagag
aaacaggccagcaaggtgcttgcggaggcagaggaagctggaaacaaagccctgcagatc
tacgctaatctcaccagtctgcctacagtggattccacagggctagagaatgaagcaaat
aagatcaagaaggaagcggaggagctagatcagctaattgccaggaagctgaaagattac
gaggacttgagagaagacatgaaaggaaaggagctagaagtaaagaacctcttggagaaa
gggaagacagagcagcagactgcagaccagctcctggctcgagcggatgcagcaaaagcc
ctggctgaagaagctgctcggaagggcaatggcacactacaggaggctaataccattctc
agcaacctgaaagattttgataagcgggtgaatgataacaagacagcagcggaggaggcg
ctgaaaaagattcctgctattacacagaccattgctgaagccaacaataagacgcgccag
gcggagctggcgctgggcaatgctgctgccgatgcccgtgaagccaaggctaaagcagat
gatgctgagaaaattgctggttctgtccagaagagtgcagctgctaccaaagccgaagct
gacaagacttttgctgatgtgacggggctggcccgagaagtggatgacgtgatgaagcag
ctgcaggatgcagaaaaagagctgaagcggaagcaggatgatgctgagcaggatatgatg
atggcaggcatggcctcacaggctgcccaggaggcagaagacaacgcaagaaaagcgaag
aactctgtgaacagcttgcttgccatcattaacaacctgctggatcaattagggcaactg
gagacagtggacttgaacgaactgaatgagatcgagggtaccctgaacagtgccaaagac
cagatgaaagagaaagacctggaccagaaggtgtctttcctcgagagagaagccaggaag
caagatgatgcgatacaggcctacaacagggacattgaagagatcctgaaggacattagc
aacctggaggacatcaagaagaccttgccctctggctgtttcaacaccccgtccattgag
aaaccctaa
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