| Entry |
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| Symbol |
TNRC6A
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| Name |
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
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| KO |
| K18412 | trinucleotide repeat-containing gene 6 protein |
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| Organism |
crid Chroicocephalus ridibundus (black-headed gull)
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| Brite |
KEGG Orthology (KO) [BR:crid00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:crid03019]
134520182 (TNRC6A)
03036 Chromosome and associated proteins [BR:crid03036]
134520182 (TNRC6A)
Messenger RNA biogenesis [BR:crid03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134520182 (TNRC6A)
Chromosome and associated proteins [BR:crid03036]
Eukaryotic type
Gene silencing
piRNA pathway
134520182 (TNRC6A)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(49903368..49989509)
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| AA seq |
1978 aa
MELSVYLNPAPVLFFALCCITVDMETNTTFCSRELEAKATKEVERKLSRAFLPHLCGTER
RDLVQEEEEQLMEERKKRKEDKKKKEAAQKKAIEQKIKVPEQTKTSVSQPQPVTSNGTST
VTSTNNNAKRATANSQQQQTLPRYPPREVPPRFRHQEQKQLLKRGQQLPVIAANLGSTPK
VLNGQSGSSTVTNKQPVTNGEVPNSSKKQPGMPPIRDLVSHSPNQSDLNHSGLGSHYENS
HWGPVSSNSDSSTNWDKVIVDGSDKEAWPSITGSDPELTSECMDTDSASSSGSERNLVIM
ASGSTGGENDGIRNGIGHGSQNKFVVGSNSNNVGNGSINGPWGLSHGTIISTCQVSVDAP
DSKSESSNNRMNAWGTINSSSNGGLNPSTLNSNGNHGAWPVLENNGHALKGSVGSGNPGT
NIQCSTIGQISNSQSINSKVGGSAHGSWGSLQENCDSEVNGTRKVSFSGQPQNLNTEMNG
PNNTTNFMTSSLPNSAGSVQINELPNNTGHGAWRVSTMNHSQIQASPVTNGTSISHLSNG
EAKNGGSYGTSWGAYGSNYSGDKCSGPNSQANGDTVNATLMQPGINGPGSTNFQINGNKG
GGVWEAGTVNSQNMPWGNGNGASAGGSRRGWGNPAQNTGTNISNGEWSKLPSNQHSNESV
NGNSRKFTNGWKSTEEDDLNSQSSAASQITEQNSAWAKTGTGDSEGSSESTGCHEDRVTT
EGQNRERRKVDQHALLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDN
GTEAWGGSVTQTSSSGGCVDRPSPNNNDTSSVSGWGDPKSATRWGDSKGSNSQGGWEDDS
AATVMVKSNQSWGSGKEEKSSWNDAQKIKQGWVDGQKASQGWAVSASDSWGENSRSNHWG
EAKKSSSGGSDSDRSVSGWNEPGKSNSVTWGGNNTNPNNSSGWDEPAKSNQNQGWGDPPK
SNQPQGWGDSSKPVNSPEWNKQDVGSWGAPSATSKPPGSGWLGGPMPAPAKEEEPTGWEE
PSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNSSSSSDQQAQVHQQLLSSSAM
SSKESSSGSGWGEPSTPATTVDNGTSAWGKPMDTGTSWGEPISDAAGTSGWGNASLGQQA
SNKPGPKSMQDSWCGDDMPLTGSRQTSWEEEEDVEIGMWNSSSSQEANPSLNWPPYMKKM
PTKGIMKGGNKQDEAWINPFIKQFTNLSFSRESPEETIQSNKMDMSGGLLQDKRMEMDKH
GLNVGDYNRVVGKGPGSRPQISKESSMDRGPYFDKDGIVADESQNMQFMSNQNMKLPPSN
NALPNQALGSLAGLGMQNLNSVRQNGNPSMFGVGNIAAQPRSMQQPPAQTLNSSQPNPRA
QVPPPLLSPQVPVSLLKYAPNNGGLSPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQ
KAQNQRSMPSGGRQQQEQQGRSLSMQQQMMQQSRQLDPNLLMKQQTPPSQQQSLHQPTMK
SFLENVIPHATPELQKGPSPINAFSSFPIGMNSNLNVNMDMSSIKEPQSRLRKWTTVDSI
SVNTSLDQNSSKHGAISSGFRLEDSPFVPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSS
SVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLN
TTLPSTSAWSSIRASNYNVSLSSTAQSTSVARNSDSKSTWSPGSVTNTSLAHELWKVPLP
PKSITAPSRPPPGLTGQKPPLSTWDNSLRLGGGWGNSDARYTPGSSWGESSSGRITNWLV
LKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNT
TILAEFASEEEISRFFAQGQSLTPSPGWQSLGSSQNRLGSIDGSHSFSNRNDLNHWNGAG
LSGTSSGDLHGTSLWGSPNYSTSLWGTPSSNDTRGISSPSPINAFLSVDHLGGGGESM |
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| NT seq |
5937 nt +upstreamnt +downstreamnt
atggagctcagtgtgtatcttaaccccgctccagttttattttttgctttgtgctgcatt
actgttgacatggaaaccaacaccactttctgttccagagaattggaagctaaagctacc
aaagaagtcgaaagaaaactaagcagggctttcctgcctcatttatgtggaactgagaga
agggatttagtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagaa
gacaagaagaagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgcca
gaacaaacaaagacaagtgtaagccagcctcagcctgtcacctctaacggcacttccaca
gtaaccagcactaataataatgccaagcgggccacagccaacagtcagcagcagcagacc
ttgcctcgataccctcctcgtgaagtaccaccgcgatttcgacaccaggaacagaaacag
cttctgaaacgaggtcagcagttaccagttatagctgcaaacctgggatctactcctaaa
gtattaaacggccagtcaggaagcagcactgtcacaaataaacagccagtgaccaacgga
gaagtgccgaacagcagcaaaaaacagccaggcatgcctcccattcgggacttggtgagc
cactcccctaaccagtcagatctgaaccacagtggtctaggatcccattatgaaaattct
cactggggaccagtctcttcaaatagtgactccagcacaaactgggataaagttattgta
gacggctctgacaaagaagcatggccatcaatcactggcagtgacccagagttgacatca
gaatgtatggacactgactctgcctctagctctgggtcagagagaaacctcgttataatg
gcttcagggagcacaggtggtgaaaatgatggcattcgaaatggcattggacatggttct
caaaataagtttgtggttggtagcaacagcaataatgtgggcaatggaagtattaatggg
ccgtggggtttatcccatggaaccataataagcacatgtcaagtttctgtggatgctcct
gacagcaaatctgaaagtagcaacaatagaatgaatgcttggggcaccataaactcttca
tcaaatggagggttaaatccaagcactttgaattcaaatggcaaccatggtgcctggcct
gtattggagaacaatggacatgccctgaaagggtctgtagggagtggtaatcctggcaca
aatattcagtgcagtaccataggtcagatatctaatagtcagagtattaactctaaagtg
ggtggttcagcccatggttcctggggaagccttcaggaaaattgtgattctgaagtaaat
ggtacaaggaaggtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatgga
ccaaataacactactaactttatgacctctagtttaccaaactctgctggttcagtgcag
attaacgaactgcctaataatacagggcatggggcctggcgtgtgagcacaatgaatcat
tctcagattcaggcctctccagttacaaatggcacttccatttctcatcttagcaatggt
gaggcgaaaaatggtggatcttatggtacttcatggggtgcctatggttctaattactct
ggagacaaatgttcaggcccaaacagccaagctaatggtgacactgtgaatgcaactcta
atgcagccaggcattaacgggcctggcagcactaactttcaaatcaacgggaataaagga
ggaggggtgtgggaggcagggacagtcaactcccagaacatgccatggggaaatggaaat
ggtgcaagtgctggcgggagtagaagaggatggggcaaccctgcacaaaacactggcact
aacatttcaaatggagaatggagtaaactgcctagtaatcagcattccaatgaaagcgtg
aatggaaacagcaggaagtttacaaatggatggaaatctactgaggaggatgaccttaac
agccagagttccgctgcttctcagataaccgagcagaacagcgcgtgggccaaaacaggt
acgggggacagcgaaggtagttcggagagcactggatgccatgaagacagagtaactaca
gaaggacagaatcgagagcgaaggaaagttgaccagcacgcattactccaaagtatagtg
aacagaactgacttagatccacgtgtcctttccaactctggttggggacagactccaatc
aaacagaacactgcctgggatactgaaacatcaccgaggggtgaaagaaaaactgacaat
gggacagaggcctggggaggctctgtgacacagacttccagctcaggggggtgtgtggat
agacctagccctaataataatgatacctcatctgtatcagggtggggagatccaaagtct
gctacaaggtggggagactccaaagggtcaaacagccaaggggggtgggaagacgattct
gctgctacagtaatggtcaagagcaatcaatcatggggaagtggcaaagaagaaaagtca
tcttggaatgacgcacagaagatcaaacagggatgggtagatggacaaaaggccagccag
ggttgggcagtttctgccagtgatagctggggcgaaaattccagaagtaaccattggggt
gaggctaagaaatccagttcgggaggtagcgacagtgacagatcagtatctggttggaat
gagccaggtaaatcaaattctgttacttggggaggtaataatacaaacccaaataattct
tcgggatgggatgagcctgcaaagtctaatcagaaccagggctggggagaccctcctaaa
tccaatcagcctcaaggttggggggattcgtcaaagccagtcaactctccagaatggaac
aaacaagacgttggctcttggggagcaccatctgccacaagcaaacccccggggtcgggc
tggctgggtggaccaatgccggcaccagcaaaggaggaagaacccactggctgggaggag
ccatcccctgaatcaatacgccgtaaaatggaaattgatgatggaacttctgcttggggt
gatccaagcaaatacaactacaaaaatgtgaatatgtggaataaaaatgtcccaaacagt
agcagcagttcagaccagcaagcacaggtacatcagcagctactgtcttcaagtgccatg
tctagcaaggagagcagttcgggttctggttggggagagccttctactccagccactact
gtagataatggaacttcagcgtggggtaaacccatggataccggtactagctggggagaa
cccatcagcgatgcagcaggcacctctggctggggaaacgcttctcttggtcaacaggct
tcaaataaacctgggcctaaatctatgcaagatagttggtgcggagatgatatgccattg
acgggcagtcgtcagaccagctgggaggaagaggaggatgtagagattggaatgtggaac
agcagttcttcacaagaagctaacccatctttaaattggccaccatatatgaaaaaaatg
cccacaaagggaataatgaaaggtggaaataagcaagatgaagcatggatcaatccattc
attaagcaattcacaaatctcagtttttcaagagaatcaccagaagaaaccatacagagc
aataagatggacatgtctggagggttattgcaagataagcggatggagatggataagcat
ggcctcaatgttggagattacaatcgtgtggttggaaaaggccctggttctcgtcctcag
atttccaaagagtcttccatggatcgcggtccttactttgataaggatggcattgtagca
gacgagtcccaaaacatgcagtttatgtccaatcaaaacatgaagcttcccccttcaaat
aatgcactacctaaccaagcccttggctccctagcagggctgggtatgcaaaacttgaat
tctgttagacagaatggcaatcccagtatgtttggtgttggtaatatagcagcacagccc
aggagcatgcagcagcctccagcacaaactcttaattcatctcagcctaatccacgtgct
caagtgcctcctccattactatcccctcaggttccagtatcattactgaagtatgcacca
aacaacggtggcctgagcccactctttggcccacaacaggtagccatgttgaatcaactg
tcccagttaaaccagctttctcagatctcccagttacagcggttgttggctcagcagcaa
aaagcgcagaatcaaagaagcatgccttctggtggtcgtcaacagcaggagcagcagggt
cgatctcttagtatgcagcaacagatgatgcaacagtcccgtcagcttgatccaaacctg
ttaatgaagcagcaaactccgccctctcaacagcagtcactccatcaacccaccatgaaa
tctttcctcgagaatgtcataccccatgctactcctgagctacaaaaagggccatcacca
ataaatgcattcagcagcttccctataggaatgaactcaaacttgaatgtaaacatggat
atgagcagtattaaagagccacaatctcgattgaggaaatggactacagtagacagcatt
tctgtgaacacatcgttagatcaaaactccagcaaacatggtgctatttcaagtggtttt
aggctggaagattctccatttgttccatatgactttatgaacagcagtaattcaccagcc
agtcctcctggatctattggggatggctggccccgtgccaaatcgcctaatggctctagc
agtgttaactggccaccagagtttcgtcctggtgagccatggaaaggttatccaaacatc
gaccctgaaactgacccttacgtcactcctggcagtgtcataaacaatctttcaattaat
actgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatctttgaac
accacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaatgtttcc
ctcagcagtacagcacaaagcacttcagtagccagaaacagtgattccaaatcaacgtgg
tctcctggatcagtcactaacacctctctggctcatgagctgtggaaggtccctttgcca
cctaaaagcatcactgctccgtcccgcccacctccagggctaacaggccagaaaccaccg
ttgtccacttgggataattcccttcgtttgggtggaggatggggaaattctgatgccaga
tatacccctggttcaagctggggtgagagcagctcagggagaataacaaattggcttgtt
ctaaaaaaccttacacctcagattgatggctcaaccctgcgtactctgtgcatgcagcac
ggtccactaataacattccaccttaacctcccacatggtaatgctttggtccgttacagt
tcaaaagaagaggtagtgaaggcacaaaaatctctgcacatgtgtgtattagggaacact
actattcttgctgagtttgccagtgaagaggagattagtcgcttctttgcacaaggccag
tctctgactccgtctcctggctggcaatctctgggatccagccagaaccgactcggatcc
attgacggttcccattcgttctcaaaccgtaatgatctaaatcactggaatggtgctggg
ctgtcgggaactagcagtggagaccttcatggcacttcactttgggggagccccaactat
tccacgagcctgtggggcaccccgagcagcaatgacaccaggggaattagcagcccgtcc
cccatcaacgctttcctttctgttgaccacctaggtggaggtggagagtccatgtaa |
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