Chroicocephalus ridibundus (black-headed gull): 134520219
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Entry
134520219 CDS
T10910
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00310
Lysine degradation
crid00514
Other types of O-glycan biosynthesis
crid01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134520219 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
134520219 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
crid01003
]
134520219 (COLGALT2)
Enzymes [BR:
crid01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
134520219 (COLGALT2)
Glycosyltransferases [BR:
crid01003
]
O-Glycan biosynthesis
O-linked Gal type
134520219 (COLGALT2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
134520219
NCBI-ProteinID:
XP_063201381
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Position
8:complement(28470452..28534016)
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AA seq
626 aa
AA seq
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MAASAGPRAPHHLLLLLPLLLGGCGASLPPEPPPPPPPSPEPQPLPESALQKPTVLLAII
ARNAAHTLPHFLGCLERLQYPKSRIALWAATDHNVDNTTAILREWLKNVQNLYHDVEWRP
MEDPQSYPEEIGPKHWPSSRFTHVMKLRQAALRAAREKWSDYILFIDADNLLTNPQTLNL
MIAENKTLVAPMLESRSLYSNFWCGITPQGYYKRTLDYPLIREWKRTGCFAVPMIHSTFL
IDLRKEASTKLMFYPPHQDYTWSFDDIMVFAFSSRQAGIQMFVCNREHYGFLPMPLKSHQ
TLQEETENFVHTLIEAMIDRPPIEPSQYVSLPPKNPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIAVKIVEAVDGKALNTSQLKALSIDMLPGYRDPYSSRPLTRGEIGCFLSHYYI
WKEVLNRELEKTLVIEDDVRFEHQFKRKLMKLMDDVEQAQLDWELIYIGRKRMQVQEPEK
AVPNVMNLVEADYSYWTLGYAISLQGARKLIGAEPFSKMLPVDEFLPVMYNKHPVAKYME
YYESRDLKAFSAEPLLVYPTHYTGQPGYLSDTETSTIWDNETVSTDWDRTHSWKSRQQGK
IHSDAQNKDALPSQSSLNAPSSRDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagcgccgggccccgcgccccgcatcacctcctcctcctcctcccactactg
ctgggcggctgcggggccagcctgccccccgagccgccgccgccgcccccgccgagcccc
gagccccagcccctgcccgagtcggctctgcagaagcccaccgtgctcctggccatcatc
gcccgcaacgcggcgcacacgctgccccatttcctcggctgcctcgagaggctgcagtac
cccaagagcaggatcgccctctgggcggccactgaccacaatgttgataacaccacagcg
atccttagggagtggctgaagaacgtgcagaacctttaccacgatgtggagtggaggccg
atggaagacccccagtcttacccagaagaaattgggccaaaacattggccaagctcccga
ttcactcatgtgatgaaactccgacaggctgccctgcgcgctgcacgggagaagtggtcg
gactacatcctgtttatcgatgcagataatttactgaccaacccacaaaccctgaacctg
atgatagcggaaaacaagacgctggtggcaccgatgctggagtctcgctccctctactct
aacttctggtgcggcatcaccccccagggctattacaaaaggacgctggattaccccctg
attcgggagtggaagaggacaggctgttttgctgttccaatgattcattccacgttcctc
attgacttgaggaaagaggcctccaccaagctgatgttctacccaccccaccaggactac
acctggagctttgatgatatcatggtctttgccttctccagtcgccaagcaggaatacag
atgtttgtctgcaaccgtgaacactatggtttccttcccatgcccctgaaatcgcaccag
acgctgcaagaagaaaccgagaactttgtgcacacactgatcgaggctatgatcgatcgc
cctcccattgaaccctctcagtacgtgtctcttcctccgaagaaccctgacaagatggga
tttgatgaaattttcatgatcaacctgaagcgtcggaaagacaggcgggatcggatgttg
cggactctctatgagcaggagattgcagtcaagatcgtggaggctgtggatggaaaagca
ctgaacacgagtcagctcaaagctctcagcatcgatatgctcccgggttaccgggaccca
tattcctccaggccactaaccaggggagagatcggctgcttccttagtcattactacatc
tggaaggaggtgctgaacagagaactggagaagacgcttgttattgaggatgatgtgcgc
tttgaacaccagtttaaaaggaagctcatgaagctgatggatgatgttgaacaagcccag
ctagactgggagcttatctacattggccggaaaaggatgcaggtgcaggagcctgagaaa
gcagttcccaatgtcatgaacctggtggaagccgattactcctactggaccctggggtat
gcaatctctttgcaaggggctcggaaactcatcggagctgagcctttcagcaagatgctg
cctgtagacgaatttctgccagtcatgtacaacaagcaccctgtagcgaagtacatggag
tactacgagtccagagacttgaaagccttttcagcagaacccctgcttgtttaccccacc
cactacacagggcagccaggctacctcagcgacacagagacctccacaatctgggacaac
gagaccgtgtcaacggactgggacagaacgcactcctggaaatcccgacagcagggcaag
atccacagcgacgcccagaacaaggatgccctgccttcccagtcatctctcaacgcgccg
tcctccagggacgagctatga
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