| Entry |
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| Symbol |
TRMT13
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| Name |
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
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| KO |
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| Organism |
crid Chroicocephalus ridibundus (black-headed gull)
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| Brite |
KEGG Orthology (KO) [BR:crid00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:crid03016]
134520223 (TRMT13)
Enzymes [BR:crid01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
134520223 (TRMT13)
Transfer RNA biogenesis [BR:crid03016]
Eukaryotic type
tRNA modification factors
Methyltransferases
134520223 (TRMT13)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:21761220..21767469
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| AA seq |
491 aa
MEPQAATAGAAGTEMAAPEPQLEPDRGSPVPGRCAYFVERKKRFCKMTPGPGRRFCGEHG
QHEGENDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPVYFVQDINAGLKDGAEIPE
RQVPVSSLSKEGLENLITKLKKASNGAGLELRLKEQILSHQALQEALSDPKNGESAFKHL
KQQASILGNMEKLHLLGPGRCFVEFGAGRGKLSHWVDVALQNVENVQFLLVERATTRFKV
DGKHKRRDSIFERLQVDIQHLCLKKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYT
ACCDGESEEPATKRFRTDKTEVASSNSADNECNKDDCKPVAGIVIALCCHHKCDWTHYVG
REFFKSVGLGPLEFHYFQRMSSWATCGMRETTTRASTSQESEDETNDTEEHEQTFSKTEG
GSDILQGILTVEERKEIGCLCKRLIDHGRIEYLQQRGYKAALQYYTESAVSLENVLLTAV
PSPSLIPEPTM |
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| NT seq |
1476 nt +upstreamnt +downstreamnt
atggagccgcaggcggcgaccgcaggggctgctgggacggaaatggcggcgccggagccg
cagctggaaccggaccgtggctccccggtaccggggcgatgtgcctacttcgtagagagg
aagaagcgcttctgcaagatgaccccgggtcctgggcggcgcttttgcggagagcacggg
cagcacgagggagaaaatgacagaaaaagaattccatgccctcttgatccaaaacacact
gtatacgaagaccaactacaaaagcatttaaaaaaatgtaattcaagagagaagccaaag
ccagtctactttgttcaagatattaatgcaggtttaaaagatggggcagaaataccagaa
agacaagtacctgtctcttctctatccaaagaagggctggagaatttaattaccaagttg
aaaaaagcaagtaatggtgcaggcctagagcttcgccttaaggaacaaatactgtcccac
caggctttacaagaagccttaagtgacccaaagaacggggaatctgctttcaagcacttg
aaacaacaggcttcaattttaggtaacatggaaaaattacatttacttggtccaggaaga
tgttttgttgaatttggagctgggcgaggaaagctgtctcattgggttgatgttgcctta
cagaacgttgaaaacgttcagtttttgcttgtggaaagggcaactacaagattcaaggtg
gatggaaaacataaaagaagagattctatatttgaaaggcttcaagttgatattcaacac
ttatgtttaaagaaagtacctattttggagaagaaaaaactaccagtggtaggaattggg
aagcatttgtgtggagctgcaacagatcttgctttgagatgcttggttgaaagttataca
gcttgctgtgacggagaaagtgaagagcctgcaacaaaacgctttaggactgataagaca
gaggtggcttctagcaattctgctgataatgaatgcaataaagatgactgtaagcctgta
gctggaattgttattgcactgtgttgccatcacaagtgtgactggacacattatgtaggc
agagaattctttaaatcagtaggacttggaccattagaatttcattattttcagagaatg
agtagttgggccacttgtggcatgcgagaaaccacaaccagagcctctacaagtcaagaa
agtgaagatgaaactaacgacacagaagaacatgagcaaacattcagcaagacagaaggt
ggttctgatattttgcaagggatacttactgttgaagaacgaaaggagataggttgcctc
tgtaaacggctgattgatcatggacggattgaatatttacaacaacgaggctacaaggca
gcactacagtattatacagagtctgctgtgtccttggagaatgtcctgttgacagctgtc
ccaagtccatctttgataccagagccaactatgtga |
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