Chroicocephalus ridibundus (black-headed gull): 134520294
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Entry
134520294 CDS
T10910
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134520294 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134520294 (ATRX)
03036 Chromosome and associated proteins [BR:
crid03036
]
134520294 (ATRX)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
134520294 (ATRX)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
134520294 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134520294
NCBI-ProteinID:
XP_063201475
LinkDB
All DBs
Position
9:14910827..14995416
Genome browser
AA seq
2424 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNKTIGKSREPKSSLASMENN
REEGSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQILDETVNEDISNENSENDVDMKSL
PKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIK
VDSEKSKIYDHTVKFSPKRNNSNCNGEEKKLDDSYSGSLTYSYKALMVPKDLLKKTKKLV
ETTANLNSSFVSFLKNATENVEINPTVQLCQLKAFKSVLSDMKKAHLALEEGLNLEIQAL
NVKNKEKNTKEKKTDVRSEKNEVKKDEGKEHVALKEDDTVKTQKKAVSERPESEPMDQSV
PTMEQTDKKCTSGEDKRSGRNEEPQYKPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQ
ITSDETDNGNPGTDHETLNSNTKLNTLMKDPKGGTKLKSSAKGTKELIVKLTPVSLSRST
VKAGDQEGNLEKGSKDADVVPRAEKCDSVKQNHNAGSELPTENETVSLAEESDLRRSPRV
KTTPLRRQADISPLTSNSEEDSNDTCNEKCKKKSSRQTRRKNDKRNSSNSIVDGPSPNKL
SKSKKPYVLDNSSDSEEMPAVLKEVAMMSRSSSDIDSNSEAPTNDQKTLNFLKNSPVKDE
NGKRKRKSSSSGSDLDAKRGKSAKNSTTAKKKRQNYSDSSNYDSELEKEIKILSKIESAK
RAKKKCSRKDDSYDSSEEEQRKKVSSKRKKDLRKQREKSSEDDDAEKPSPEKETNHSSKD
KKIGKGSAAKERTNRDLKEKTVKGKHNESSDVEKSSLEKEENCPKGEKLTEVKKGKDLKK
KKVQEDSSSESTEKSAKKEHDFDSSKDRFKNKKGSENKTKKSEKPKKKSYKEEQEDSSSD
VEKLPPEKGSSNSSENDKTKNEPVLQEKQRRNLRERVSKRVQLDLPSDAEKSPLKEESFS
KDAVRSQKQTETKEKKKISHKKKMSKKEQNDSLSSSDEESYEDSKKKIKRGSTKESKKGN
LKKKVVSTSSSSSDKEENYEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGETK
SRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDDESDEGKKKTGKQNENT
GDDEENEKEDNSESDSEEEESKKPRYRHRLLRHKLTVSDGESGEEKKVKPKEKKEGKRRS
RRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEVEENQRSYKQKKKRRRIKV
QEDSSSENNNKSNSEDEDNDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIA
EREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGV
QFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCPL
NTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQHWQDEGGVMIIGYEMYRN
LAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTG
TPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILY
EMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGSGNEGGRGKA
GAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDEFIASDSDETSMSLSSDDCA
KKKKSKGKKVKKGCSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEELVNNPPSVTKSDEGK
ATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISL
DLIEDFLELANREKTDKDKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNV
RGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLAQ
GTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDT
PMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMR
FNMPTGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAARIQ
PLEDIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRI
LMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGMQ
PPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccgtgagtgaaagcaagttgaatacactagtgcagaaacttcatgac
ttcttggctcactcatcggaagaatctgaggacgcaaactctcctccagcattatctaaa
aacaaaactataggtaagagtagagaacctaaaagtagtctggcttcaatggagaacaat
agagaagagggcagtagttcttcagaaagaaccaaatccttaggatcgtcacgttcaaaa
aggaaacctacagttgtaacaaaatatgttggatcagatgatgaacaaatcttagatgaa
actgtaaatgaagatatttcaaatgaaaactcagaaaatgatgttgatatgaaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaag
cgtggagaggaaggactacatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcaaaaggattcgatctatagacatcctacactgaaagttcttatttgtaagact
tgttacaagtattacatgagcgatgacattagccgtgattcagatgggatggatgaacag
tgtaggtggtgtgctgaaggtggaaacttgatttgctgtgacttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggtcgaaaggagctatcgactatactggatgaa
aataaccagtggcactgctatatttgccatccagagcctttgttggacttggtcactgca
tgtgacagtgtctttgaaaatttagaacagttactacaacaaaacaaaaaaaagataaaa
gttgacagtgaaaaaagtaaaatatatgaccatacagtcaagttttctccaaagagaaat
aattcaaattgtaatggtgaagaaaaaaaactagatgattcatattcaggttcactaaca
tattcttataaagccctaatggtgccaaaagacttgcttaagaaaacaaaaaagctggtt
gaaactacagcgaatctgaattctagctttgtaagctttttgaaaaatgctacagaaaat
gtagaaataaacccaactgtgcaactttgtcagttaaaagcttttaaatctgtgttgagt
gacatgaaaaaagctcatctagcactagaagaaggtctgaacctggagattcaagctttg
aacgttaaaaacaaagagaaaaataccaaagagaaaaaaactgatgttagatcagaaaaa
aatgaggtgaaaaaagatgaaggaaaggaacatgtggcattaaaagaggatgacactgta
aagacacagaaaaaagctgtatcagaacggcctgagagcgagcccatggatcagagtgtt
ccaacaatggagcaaacagataagaagtgtacttctggtgaagataaaaggtctggcaga
aacgaagagcctcagtataaacctaatagtacagaggctttagacatggatatagtgtcc
attccctcatctgttcctgaagatatttttgagactctagaatctgctatggagattcag
attacatcagatgagacagacaatggaaatccaggaacagatcacgagactttaaattcc
aatacaaaattgaacactcttatgaaagatcccaaaggtggtactaagttaaagtcatcg
gctaaaggaacaaaagagttgattgtaaaattgactcctgtttccctttcacggtcaaca
gttaaagctggagatcaagaaggcaatctagagaagggaagtaaggatgctgatgtagta
cctagagcagaaaaatgtgattctgtaaaacaaaatcataatgctggcagtgaacttccc
acggagaacgaaactgtctcacttgcagaggagtctgatctcaggagatcaccacgtgtg
aagaccacacctctaaggcgccaagcagacatcagtcctttaacatcaaattcagaagaa
gacagcaatgacacatgtaatgaaaaatgtaagaagaaatcatcaagacagacaaggagg
aagaatgataaaagaaattcatctaacagtattgttgatggtcctagccctaataaactt
tctaaatcaaaaaagccatatgtattagataatagctcagattctgaagaaatgccggct
gttcttaaagaagtagctatgatgagtcgcagttcttcagatattgatagtaatagtgaa
gcaccaacaaatgatcagaagactttaaattttctaaagaattcaccagtaaaggatgaa
aatggaaaacgaaaaaggaaaagttccagttctggctcagatttagatgctaaaagaggc
aaatcagctaaaaattccactactgctaaaaagaaacgacaaaactattcagattcttca
aactatgattctgagttagaaaaagaaataaaaattctgagtaaaattgagtctgcaaaa
agagcgaagaaaaaatgctcacgaaaagatgatagttatgattcttctgaagaagagcag
aggaaaaaagtaagcagtaagagaaagaaagatttgaggaaacaaagagagaaatcttct
gaagatgatgatgctgaaaagccttccccagagaaggagactaatcattcttctaaagat
aaaaaaattggtaaggggtcagctgctaaggaaaggacaaacagagacttaaaagaaaaa
actgtaaagggaaagcacaatgagtcttctgatgttgagaagtcttcactggagaaagag
gagaattgtcctaaaggtgaaaagctaactgaagttaagaagggcaaggatttgaaaaag
aaaaaggtacaggaagattcttcgtcagagagtactgagaaatctgcaaagaaagagcat
gattttgattcttcaaaagacagattcaagaataaaaaaggatcagaaaacaaaacaaag
aaatctgaaaaaccgaaaaagaaaagttacaaggaagaacaagaagattcctcttctgat
gttgaaaagttacctccagagaaaggaagtagcaattcttctgaaaatgacaaaactaaa
aatgaaccagtgcttcaagaaaagcaaaggaggaatttgagagagagagtatctaaaaga
gtacagcttgatttaccctctgatgctgagaaatctcccctaaaagaggagagtttttct
aaagatgctgtgcggagtcaaaaacaaactgaaactaaagaaaagaaaaaaataagtcac
aaaaagaaaatgtccaagaaagaacagaacgactcattgtcctcttctgatgaggagtct
tatgaagacagtaagaagaagattaaaagaggatcaacgaaagaaagtaagaagggtaac
ttaaaaaagaaggtggtttccacttcctcttcctcatctgataaggaagaaaattatgaa
cagaattcaacaggtgatggaagcagcgatgagcagaaaattatgccggtgaccgaaaac
ttaatgctgtctgctggtacaggattttgtcagtcatcaggagatgagggagagactaaa
tcaagggctgttccaatggaggaggaggaagatgatgatgatgacgatcctgagaataga
attgccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgca
tcttcagatgatgaatcggatgaaggaaaaaagaaaactggaaagcaaaatgaaaacacg
ggagatgatgaagaaaatgaaaaggaagataattctgaatcggattcagaggaagaagaa
tcaaagaagcctagatacaggcacagactgctgaggcacaagctgacagtgagtgacgga
gaatctggtgaagaaaaaaaggtgaaaccaaaagagaaaaaagaaggcaagcgcagaagt
agaaggaaagtgagcagcgatgattcaaatgactctgagtttcatgaatctgcagttagt
gaagaagtcagtgaatctgaagatgaccagcgtccaagaacaagatctgccaagaaagcc
gaggtggaagaaaaccagcgcagttacaaacagaaaaagaaacgaaggcgtataaaggtt
caagaggattcttcaagtgagaacaacaataagagtaattctgaggacgaggacaatgat
gattcaaaatctcctggaaaaggcaggaagaaaataaggaagattattaaagatgataag
cttagaacagaaacacaaaatgcacttaaagaagaagaagaaagaagaaaacgtatagca
gaaagagaacgggagagagagaaattgagagaggtgatagagatagaagatgcttcacct
ctgaagtgccccattacaactaagctggttttagatgaagatgaggaaaccaaagaacca
ttagtgcaggttcacaggagtatcgttaccagactgaaaccacaccaagtagatggtgtt
cagttcatgtgggattgctgttgtgaatctgtaaaaaaaacaaagacatctcctggttct
ggatgcattcttgctcactgtatgggtctggggaaaacgttacaggtagtaagttttctt
cacacagtcttgctgtgtgacaagctggattttcggacagctctggtggtgtgtccgctg
aacactgccttgaactggttgaatgagtttgaaaaatggcaagaaggtttagaagatgat
gaaaaactagaggtctgtgaactagcaactgtgaaacgccctcaagagagaagctatatg
ctccagcattggcaagatgaaggaggtgtgatgataataggatatgagatgtaccgtaat
cttgcacagggcaggaatgtgaagagcagaaaacttaaagaaatatttaataaagcttta
gtcgatccaggtcctgacttcgttgtttgtgatgaaggacacatattaaaaaatgaagca
tctgctgtttctaaggcaatgaattctattcgatccaggagaagaataattcttacagga
acaccactgcaaaataatcttatagaatatcactgcatggttaacttcattaaggagaat
ttgcttggttcaattaaggaattccgaaatcgatttataaatccaattcagaacggtcag
tgcgcagactctactctggtagatgtcagagtaatgaagaagcgcgcacatattctctat
gagatgctagctggatgtgttcagaggaaagattacacagcattaacaaagttcctccca
ccaaaatacgagtatgttctagaagttcgaatgacacctattcagtgcaagctctaccaa
tactacttggatcatttgacaggtgtaggtagtggcaatgaaggtggaagaggcaaagct
ggagctaaactattccaggatttccagatgttgagcagaatctggactcacccttggtgt
ttgcagctggactatattagcaaagaaaataagggctattttgatgaagacagtctggat
gagttcatagcttcggattccgatgaaacttcaatgagcttaagttctgatgattgtgca
aagaaaaaaaaatccaaggggaaaaaagtgaagaaagggtgtagctcaagtggaagtggc
agtgataacgatgttgaagtcattaaagtctggaattcaagatctcgtggaggtggagaa
ggaaatgcagaagaacttgtaaacaaccctccatctgttacaaaatcagatgaaggtaaa
gctacatcttcttccaatcctggtagcccagcgccagattggtacaaagattttgtcact
gatgcagatgctgaagtgttggaacattctgggaaaatggtgcttctctttgaaattctt
cgaatggcagaggagcttggagacaaagtcctagtgtttagccagtccctaatatctctg
gatttgatagaagattttctggagctggccaacagggagaaaactgacaaagacaagcct
cctatttataaaggtgaaggaaaatggtttagaaacattgattactatcgcttagatggt
tcaactacagctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaatgtg
agaggccgcttgtttattatatccactaaagcaggttccctcggaattaatctcgtggct
gctaatagagtaatcatctttgatgcttcttggaacccatcgtatgacatacagagtatt
ttcagggtttaccgctttgggcagaacaaacctgtgtttgtgtacaggtttttggctcag
ggaacgatggaagataagatctatgatcgtcaggtaacaaagcagtcactgtctttccgg
gttgtcgaccaacagcaagttgaacgtcattttactatgaatgaacttaccgagttgtac
acttttgagccagatttgttggatgatcctaattcagaaaagaaaaagaagagagataca
ccaatgttgccaaaagatacaattctagcagaattgcttcaaattaataaagagtatata
gttggatatcacgaacatgattcactcctggaccataaggaggaagaagaactcactgaa
gaagaaaggaaggcagcatgggcagaatatgaagcagaaaagaagggcttgactatgcgt
ttcaacatgccaactgggaccaatatgcttcccacaaatttcaactctcaaacaccatat
attcctttcaatttgggcgctctgtcagcaatgagtaatcaacagctggaggaccttatt
aatcaaggaagagagaaagttgtggaagcaaccaacagtgtaactgcagcaagaattcag
ccccttgaagacatcatttcaaccatatggaaagaaaacgtgacactcacggagagccaa
gtacaggccctggcactaagcaggcaggcgagccaggagcttgatgtcaagcgccgagaa
gccatctataatgatgtccttactaaacaacagatgttaatcagttgtgttcagaggata
ctgatgaacagaagactacagcagcagtacaatcagcagcaacagcagcagatgtcgtac
cagcaagcagcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaatcct
tccaactaccaacagatagatatgagaggaatgtatcagtcagtgtctggtggtatgcag
ccaccgccgttacaacgagcaccacccccaatgagaggcaaaaatccagggccttcccaa
gggaaatcaatgtga
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integrated database retrieval system
