Chroicocephalus ridibundus (black-headed gull): 134520394
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Entry
134520394 CDS
T10910
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134520394 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134520394 (CSTF2)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
134520394 (CSTF2)
U7-dependent histone pre-mRNA processing factors
134520394 (CSTF2)
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GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
134520394
NCBI-ProteinID:
XP_063201722
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Position
9:complement(19194015..19202334)
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AA seq
595 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGIPGGGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
VGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVMEPRGLEP
RGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGG
FSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggaccgctccctgcgctccgtcttcgtg
gggaacatcccgtacgaagccaccgaggagcagctgaaggacattttctctgaggttggg
cccgtggtgagctttaggctggtgtatgacagggagacaggaaaaccaaagggctatggc
ttctgtgagtaccaagaccaggagacggccctcagtgccatgcggaacctgaatgggcga
gaattcagtgggagagccctgcgcgttgacaatgcggccagcgagaagaacaaggaggag
ctgaagagcttgggtacaggtgcacccatcatagagtcaccctatggggaccctgtcaat
cctgaagatgcccctgaatccatcagccgtgcagtagccagcctgccccctgagcagatg
tttgagctgatgaagcagatgaagctgtgtgtccagaacagcccccaggaagccaggaac
atgctgctccagaacccccagcttgcttacgccctgctgcaggcccaggtggtcatgagg
atcgttgacccggagatcgcgctgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcagccagtgccagggccagggcctgggccgggaccagggcctggg
ccagggccaaatgcccagctgaacccgcagaataccccctcgtcccagccgcagcccata
ggtgggatgcacgtaaatggtgctcctccgctgatgcagccgcccatgcagggaggagtg
ccggccccaggacagatggcagcccctgtgcagggcccgggccctggccccatggctcca
ggaggtgggatgcagccacaggttgggattccgggcggagggcctgtccccttggagcgt
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccacgggggcccttgatggatgctcga
gtcggaagagatccccgagggctggagccacgaggattggagccgcgagggctggagccc
cgggtgatggaggcgcgagccctggaggcacgaggcctggagccacgggtcctggagccg
cgggtgctggaagccagggccatggaggccagggtcatggagccccggggcctggagcct
cgagggcctggtcccaacccgcgtggccccatgcctggtgggatacagggtccagggcca
cttaacatgggagccagtggcccgcaggggccccgccaggttcctaacatggcaggggca
ggcatgcagggaggaggcattcctggggcaggggtccaaggagctggtcagcccggaggc
tttagccctggacagagccaggtcaccccccaggatcatgagaaggcagccctgatcatg
caggttctgcagctgacggcagaccagatcgccatgctgcccccggagcaacggcagagc
atcctgatcctgaaggagcaaatccagaagtccacgggggcaccctga
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