Chroicocephalus ridibundus (black-headed gull): 134520398
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Entry
134520398 CDS
T10910
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134520398 (ZC3H12B)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
134520398 (ZC3H12B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
134520398
NCBI-ProteinID:
XP_063201738
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All DBs
Position
9:complement(5655789..5687115)
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AA seq
837 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSTCSNIQWRE
KEVSTKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQ
IQAVLNKLGADALINDVLAELVRLGNKSESEGQSSASSTTSTLVPRGPCPKEIASPELSL
EDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSS
KGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLSVARKSEASSVPSLVSALSVPTLPPPKS
HAAGALNTRSASSPVPGSSQFMHQKSSLEHMSSVQYPPILVTNSHGTSVSYTDQYPKYES
LGDHGYYSLLSDFSNLSISSIRNTDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYN
DLYLGVADASPEDNVKIHRLPSQNRVQPFSHGYHEALNRVQSYGTEEPKQSLRKQSVSHL
GLHAQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRP
PLCREQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGIC
GEPREPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagatgctggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgaacctgagcaaccatacttcagaagcacctgtagcaatattcagtggagagaa
aaggaggtttccactaaaccacatcggccgctctgtcggtccccttgtttggatcgccca
agtttttcacagagcagtatcacacaagacttgaagctagacgaatgcaaaacaaatttg
gacaaggaataccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcag
atccaggctgtactgaataaattgggagcagacgcgctcatcaatgatgttctggcagag
cttgtgagacttggcaacaaaagtgaatcagagggacaaagcagtgccagcagtaccact
agtactctggtgccaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactt
gaagatgaagttgtggataacagtgataacctgaggccaattgtcattgatggaagcaat
gtggctatgagccatgggaataaagaaggattttcctgtcggggaattcagcttgctgtg
gattggtttctggaaaaaggacataaagatatcactgtgtttgtacctgcatggagaaaa
gaacagtctcgacccgatgcaccaattacagatcaggaaatcttgcgcaaattggagaaa
gaaaaaattcttgttttcaccccatctcgaagagttcagggaagaagagtagtttgctat
gatgatcgattcatagtaaaactggcttttgactcagatggcatcattgtatcaaatgac
aactatcgggatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcggctg
ctaatgtattcttttgtgaatgacaaatttatgcctcctgatgatcctttaggacgccat
ggtccaagccttgaaaatttcttaaggaaaaggccagttattcctgaacataagaaacaa
ccgtgtccttatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaa
cgggcaaaccagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatct
gctgtgaaaactatgagtgagggagccttggccaaatgtggcacagggccatccagctcc
aaaggagagatcagttctgaagtgaagcgcattgccccaaaacgtcagtcagatccaagc
attagatcagtagctgtggagcctgaggaaaagttatcagtagcccggaagtccgaggcc
agctctgtcccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagc
catgcagctggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacag
ttcatgcatcagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatacta
gtcaccaatagccatggcacctcagttagctatactgaccagtatcccaaatacgaatca
ctgggggaccatggctattactccttactcagtgatttctccaacttgagcataagtagt
atccgtaacacagattattacggggcggatatggaccaggggatgtattctagaaactca
agcccctgtcctgacaattgcttaagccatacaagtaatgattcttattcctcttacaat
gacttgtatctgggtgtagcagatgccagtccagaagacaatgtgaagatccacagactg
ccatcgcaaaatcgtgttcagcctttttcccatggttaccatgaagccttaaatagagtt
cagagttacggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccactta
ggcctacatgcccagcatccagttgttggagcacggtccagttgtccaggagaataccct
gtgcctcaaaatgttcatccatcaactgctcaaccaagccgtgccttggtcatgacaaga
atggacagtatttctgactcacggctttatgaaagtaaccctacgaggcagagaagaccg
cctctctgtcgagagcagcatgccagctgggatccattaccatgtgcgtcggactcgtac
acttaccactcgtatccattgagtaacaacctcatgcagccgtgttacgaacccgtaatg
gtaaggagcatgcctgagaagatggagcaactctggaggaatccctggattgggatatgt
ggtgagccgcgggaaccacacatcatcccagaacatcagtatcaaacttacaagaacctc
tgcaatattttccctccgagcattgtcctttctgtgatggaaaagaatccccacatgaca
gatgcacaacagctggcagctatgattgttgccaaattaagaacagggcgttaa
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