Chroicocephalus ridibundus (black-headed gull): 134520405
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Entry
134520405 CDS
T10910
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134520405 (AFF2)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134520405 (AFF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
134520405
NCBI-ProteinID:
XP_063201750
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Position
9:8513628..8930074
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AA seq
1268 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFPEPRNRMIP
SHQISGHSSTSMPPPSSLSSNSTLLHSHQSSRKSRTDWSRGGHNSSGAQPSQSSSQQSRT
KHGSSHDQPQSRYEDLYNCQSEQHKSGGTEEANSVAASSHSRRHTHSKSAAGEHTYKENS
HSKSPTELEFVGHGPGSPLPSTSLLSANNGLSTQNFPPGLHCKNSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPIEIESGYGNQSFGTLLEGKVNTPSSKNKVPKLNIPPVTEVTLPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPAGKVAT
KSVPQKSMLEDDLKLSSDEDDNEQAAEKTKLRNIPVNSLTVPAAHATGLAHSSGGSGSSS
ESESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINNQ
NEPHNETSSQAQSNQQAEGPNKGKLNSSLPPTDSKDRAILSPIREKAKPRVAQKTPEAKS
SKQKSPAHNEPTSQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPKV
RTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESLQ
AKVLPACTGSGNGVKVKDSGSNILSVSSLTSNGSNTSIDQTSNDLEEQLFSPIPIVQNEL
LSPLREYEELKSLWVKIDLSLLSRIPGQEPFETTSVKSESREANVKHRRPSRESPTPAAE
KPSTKSKRKHKQTESLDTFVESKKQRLEDPSASCLLPPCISPIPNHRLTSTKESSGSSVK
KVAKKREEKLFPPPLSPLLDEPVHRRHSSDNSSFSQETNITNTSQTSSSSSSVSKHRKNE
NKSSSNPKGICEEESLNTPTANSLLDTSHLETDIWSAMPTLSNGNSEPRRPKITFDDVLH
NADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSET
VELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFK
NSSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGSSAGTTGSSLAGTITIPQRIHHMA
ASHVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQHSSMTNLVRYVRQGLHW
LHIEAHLL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggagtgcacttaagcggaaagaatgggagagaagaaaccaggaagtccagcaagat
gaagatctctttgcttcaggttttaacctctttggggaaccctacaagacaaataaaggc
gatgcccttgcaaaccgtgtccagaacacattgggaaattatgatgagatgaaggacctg
ttgaccaaccattccaaccagagccaccttgtaggaatcccaaagaattctgtcccacag
acacccattgacaaaaatgaacagaactttttcccagagccaagaaacaggatgatccca
tctcatcagatcagtggccactcatcgacatcaatgcctccaccttcttcattgtcatct
aattctactttgctacacagtcaccagagcagcaggaagtcaaggacagactggtcacgt
ggtggtcacaactctagtggggcccagccaagccaatccagtagtcagcagagtcggaca
aaacatggctcttctcatgaccagccacagagcaggtatgaagacctctataattgtcag
agtgagcagcataaaagtggaggaactgaggaagcaaattctgtggcagcatcttcacat
tcaaggaggcatactcattcaaagtcagcagctggagaacatacttacaaagaaaatagt
cattcgaagtcacccacagagcttgagtttgtaggtcatggtcctggatctccacttcct
tccacatctttgctatctgcgaacaatggtctttcaacccagaatttcccaccaggactt
cactgcaaaaacagcatggtccagcaaaagcctacagcgtatgtcaggcctatggacggt
caggaccaggtacccaatgactcacctgaactgaaacctccgatagaaattgagagtgga
tatggaaatcagtcctttggaacactgctggaaggaaaagtgaacacacctagttcgaag
aacaaagtaccaaagctcaacattcctcctgttactgaagttacccttcccaatgactcc
agctgtgtggaagaaatattgcgggagatgacccattcctggcctcctcctcttactgct
attcacactcctggcaaggctgagcagaccaagttttctatcccaagcaaggactcccaa
catctgacctcaggatacaatgtacaaaagtggagtgatccagcagggaaagttgcaaca
aagtcagtgccacaaaagtcaatgcttgaggatgatctgaaactcagcagtgatgaagat
gacaatgaacaggctgctgaaaagacaaaattgagaaacattcctgtaaacagcctgacg
gtgccagcggcacacgcaaccggcttggcccattccagcggcggctccgggagttccagc
gagtccgagagcagctctgagtccgactccgacagcgagagcagctccagtgacagcgag
tgcaacgaggagtcgcgcagtgccacgccggagcctgaacctccctcaacaaacaaatgg
cagctggataaatggctaaataaagtgaacccccacaacaagaccatcatcaacaatcaa
aatgagcctcacaacgagaccagctcccaggcccagagcaaccagcaggccgaagggcca
aacaaagggaagctcaacagcagcctgcccccgaccgattccaaagacagggcaatcctt
agtcccatccgagagaaagccaaaccgcgggttgcccagaaaaccccagaggcaaaaagc
tccaagcagaagtcaccagctcataatgagccaacttcacaaaggactactgggaaaaag
caacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaaccaaat
aataccagcaacactcccaaagaaaaagacacacaggaaccccccgagcagccaaaggtt
cgaactaaagcagcagttgggaagaccgctccaaggaaagaaccgcgaactagcacaggt
ctcacttcggagaagaaaaagtacagaggccccagcaaaattgttcctaagtcccgggaa
ttcattgaaacggattcatctacttctgactcaaatacagaccaggaggagagcttgcag
gcaaaggtattgccagcttgcactggctctggcaatggcgtcaaagtgaaggactctggc
agtaacatcctcagcgtaagtagtttaactagcaatggcagcaacacatccattgaccag
accagcaatgacttggaggagcagctcttttctcctatcccaatcgtacaaaatgaactt
ctgtccccactgagagaatatgaagaactcaaatctctgtgggtgaaaatagaccttagt
ttactctctaggatacctggacaagagccttttgagaccacgtctgtgaaaagtgaatca
agagaggcaaatgtgaaacacagacgaccatctcgagagtcccctaccccagcagctgaa
aaaccatccacaaagtccaaaaggaaacacaagcagacagaaagcctggatacctttgtt
gaaagcaagaagcagcgcctggaggacccttcagcttcatgcctgctcccaccttgtatc
tctccgataccgaatcacagattaaccagcactaaagagagcagcggtagctcagtgaag
aaggtggcaaagaaaagagaagagaagctgttccctcctccgttatcccccctcttggac
gagcctgtgcaccggcggcacagcagtgacaacagctccttcagccaagagaccaacatc
acaaacacctctcagaccagcagctcttcctcctctgtttctaaacacagaaagaatgaa
aataaatcctcttctaaccccaaaggcatctgtgaggaagaatctctcaatacaccaacg
gccaacagtcttcttgacaccagccatctagaaacagacatctggtctgcaatgccaacg
ctttccaatgggaattctgagcccagaagacccaaaataacatttgatgatgtgcttcac
aatgcggattattacatgcaagaggctaagaagctgaagcataaagcagatgcattgctg
gagaagtttggcaaagcagtgaattatgctgatgctgccctctccttcatcgagtgcggg
aacgctatggagcgagatccattagaagctaaatctccgtacaccatgtactcagagact
gtggaactcatcaggtatgcaatgagactcaagaatttcacaggctcttctgccacagaa
ggggacaagaaattagcagttttatgctaccgatgcttatcacttctctacttgagaatg
tttaaactaaagaaggaccatgctatgaagtactccagatctctgatggaatattttaag
aactcttcaaaagcctcgcaggccccctcaccttggggcggcaatggaaagagcacagaa
acaccatcgcccatgtccctgagcccgtcccctgtcagctctgctggaagcagcgcaggt
accaccggctcctccttggcgggaaccatcaccatccctcagcgcatccaccacatggct
gccagccacgtcaacatcaccaacaacgtcctgcggagctacgagcactgggacatggct
gacaagctgactaaggagaacaaagaattctttgttgacctggactcagtgatgggaccc
ttaacacaacacagcagtatgaccaatctggttcgttatgttcgccaaggactccactgg
ctccacattgaggctcatttgttgtag
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