Chroicocephalus ridibundus (black-headed gull): 134520417
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Entry
134520417 CDS
T10910
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134520417 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134520417 (SIN3A)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
134520417 (SIN3A)
REST complex
134520417 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
134520417 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
134520417
NCBI-ProteinID:
XP_063201787
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All DBs
Position
9:26093761..26128164
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFQHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHTAPVQPHGSQVVQSHAHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQAQHQSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHIETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENNNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcacccgtgtatgcgtcgcagcagaggcgtatc
accagcagcactgaagcttttcaacaccagcaccgtgtgcttgccccagcacctccagta
tatgaggcggtttcggagactatgcagtctgccacgggcatccagtactccgtaactccc
agctaccaggtgtcagccgtgccccagagctcgggcagccatgggccagccatcgcggct
gtccacagcggccaccaccacactgcgccagtgcagccccatgggagccaggtggtgcag
agccacgctcaccccactccgccggccgtgcccgtgcagggacagcagcagttccagagg
ctcaaggtggaggatgcattgtcttatcttgaccaggtgaagctgcagtttggtagccag
ccacaggtctacaatgacttcttggatattatgaaagaatttaaatctcaaagtattgac
actccaggagtgatcagccgtgtatcgcagctcttcaagggccacccagacttgatcatg
ggtttcaacaccttcttgccgcctggttacaagatagaggtgcagacgaatgatatggtg
aacgtgacaacaccagggcaggttcaccagatccccactcacggcttgcagccccagccg
cagccccaggcacagcatcagtcgcagccttcagcgcaatcaaccccaacaccagcacag
ccagcaccacagccaccgccggccaaaatcagtaagccatcacagttgcaggcacatact
cctgccagccagcaaactcccccgattccaccatatgcatcgccacgctcaccgccggtt
caacctcatacgcctgtgacaatctctctgggaaccacaccatccctgcagaacaatcag
cccgtcgaatttaatcatgctatcaactatgtcaacaagataaagaatcggttccaggga
cagccagacatctacaaagccttcctggagatcctccatacatatcagaaagagcagcgt
aatgccaaggaggcaggaggtaactacacgccagctttgacggagcaggaggtgtacgcg
caggtggctcgcctcttcaagaaccaggaggatctgctctcggagtttgggcagttcctg
cccgatgccaacagctctgtgctgttaagtaagacaactgcagagaaagtggaatcggta
agaaatgatcacggtggcacggtgaagaagccacagctcaacaacaaacagcaaagaccc
aaccagaatggctgtcagatccgacggcactcaggaactggagcaacccctccggtgaag
aagaaaccaaagctgcttggtttaaaagaccagtctttggcggaagccagcaaacatggt
gtggggacagaatctctcttctttgagaaggtccgcaaagctctgcgtagcacagaagcg
tatgaaaacttccttcgctgcctggttattttcaaccaggaggtgatctcccgggctgag
ctcgtgcagctcgtttctccattcctggggaaattcccagaattgttcacttggtttaaa
aactttctggggtataaagagtctgttcatatcgagacgtatccaaaggaacgggccacc
gaggggattgccatggagatagactatgcctcttgtaaaagactgggctccagctatcga
gccttacccaagagctaccagcaacccaagtgcacggggcggactccactgtgtaaagag
gttttgaatgacacctgggtctccttcccatcctggtccgaagactccacatttgtgagc
tccaagaagacacaatatgaagagcacatctacaggtgtgaggatgagcgtttcgagctg
gatgttgtcttggagaccaacctggcaacgatccgcgtccttgaggcaatccaaaagaaa
ctctcgcgcttgtctgccgaggagcaggccaaattccggctggacaacactctgggtggc
acttcggaggtgatccaccgcaaggctctccagaggatatatgctgacaaagcagccgac
atcattgatggacttcgaaagaacccatctgtggctgttcccattgtactgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagagaggatttaataaagtctggcgagag
cagaatgagaagtattacctgaaatccttggaccaccagggcatcaacttcaagcagaat
gataccaaggtcctgaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagagcaggcttcagaagacaatgctggagtccccacaggcccacacctatcacta
gcctatgaagacaagcagatcctggaagacgctgcctctctcatcatccaccatgtgaag
cggcagacgggaatccagaaagaggacaagtacaaaatcaagcagatcatgtatcacttc
attccagacctgctgtttgctcagcgaggtgaactctcggatgtggaagaggaggaagag
gaggaaatggatgtggatgaagcaactggggctgcaaaaaagcacaatggtgttgggggc
agtcctcctaaaaccaagctgatgttcaacaacacgacggcccagaagctgcggggcatg
gatgaggtctacaatctcttctacgtgaacagcaactggtacatattcatgcggctgcat
cagatcctgtgcttgcggctgctgaggatctgcacccaggccgagcggcagatcgaagag
gagacacgggaaagggagtgggagagggaagtgctgggcataaagcgagacaagagcgac
agtcctgccatccagctgcgactgaaggagcctatggacattgatgttgaggattattac
ccagccttcctggacatggtgcgcaatctcctggatgggaacatggactcatcgcagtac
gaggactccttgcgcgaaatgttcaccattcacgcctatatcgcctttaccatggacaag
ctgatccagagcattgttcgacagctccagcacatcgtgagcgatgagatctgcgtgcag
gtaacagacctctacctgtcggagaacaacaatggagcaacaggaggtcttctcgcttcc
cagtcttctcgtacgcttctggaggccgcctaccagcgcaaagctgagcagctcatgtca
gaggagaactgtttcaagctgatgttcattcagagcagaggtcaagttcagttaaccatt
gaactgctggacacagaagaggagaactcggatgaccctgtagaagcagagcgctggtca
gactacgtggagcggtacgtcaactccgattctacctcccctgagctccgggagcacctg
gcccagaaaccggtcttcctgccgaggaatctgcgacggatccgtaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtccatggagaacgtg
gagagcctggacaagctggagtgtaaattcaaactgaactcctacaagatggtgtatgtg
atcaaatcggaggattacatgtacaggaggacagctctgctgcgagcccagcagtcccat
gaaagagtgagcaagcggctgcaccagcggttccaggcctgggtggacaaatggaccaag
gagcatgtgccccgcgaaatggcagccgagacaaacaagtggctaatgggtgaagggttg
gagggcttggtgccctgcaccaccacctgtgacacagagacattgcactttgtcagcatt
aacaagtaccgcgtcaaatatggcacgatattcaagacaccgtaa
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