Chroicocephalus ridibundus (black-headed gull): 134520471
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Entry
134520471 CDS
T10910
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134520471 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134520471 (RUNX1)
Transcription factors [BR:
crid03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
134520471 (RUNX1)
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GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
134520471
NCBI-ProteinID:
XP_063201938
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Position
1:102848884..103023925
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AA seq
472 aa
AA seq
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MASNSIFESLPSYQHFLRDTSTSRRFTPPSTTLSPGKMTEPLPLPGADHSGALPGKLRSA
DRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMA
GNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIK
ITVDGPREPRRHRQKIDEQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLN
HTTAFNPQPQSQIQDTRQVQPSPPWSYDQSYQYLGSIATPSVHPATPISPGRASGMSSLT
AELSSRLSSASDLTAFSDPRVGIDRSFSALPSISDPRMHYPGAFTYTPTPVSSGIGIGMS
AMSTATRYHTYLPPPYPGSSQAQGSPFQTSSPSYHLYYGTSAGSYQFSMISGGDRSPPRI
HPPCTNASTGSTLLNPNLPNQSEVVEAEGSHSNSPTNMATTARLEEAVWRPY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacagcatatttgagtcacttccttcttaccagcacttcttgagagatacc
agcaccagccgccgcttcacgccgccctccaccacgctgagcccggggaagatgaccgag
ccgctgccgctgcccggcgccgaccacagcggcgccttgccggggaagctgcgcagcgcc
gaccgcagcatggtggaggtcctggccgatcaccccggggagctggtgcgcaccgacagc
cccaacttcctctgctccgtgctgcccacccactggcgctgcaacaagacgctgcccatc
gccttcaaggtggtggccttgggagacgtgcccgatgggacgctggtaacggtgatggct
ggaaacgatgaaaactactctgcagaactcagaaacgccacagctgccatgaaaaaccaa
gtagcaaggttcaatgacctccgattcgtgggcagaagtggaagagggaagagcttcacg
ctgactatcactgtcttcacaaatccgccccaagtagccacataccacagagccatcaag
ataacggtggacggaccccgcgaacccagaagacatcgtcagaaaatagatgagcagaca
aagcccgggagcttgtccttttcagagcgcctgagtgaactggagcagttgcggcgtacg
gccatgagggtcagcccacaccacccagcccccacacccaacccacgagcctccttgaac
cacaccactgcttttaaccctcagcctcagagtcagattcaggacacaaggcaagtgcag
ccatctccgccgtggtcctacgaccagtcctaccagtacctgggctccatcgccaccccc
tccgtgcaccccgccacgccaatatcacccggcagggcgagcggcatgtcatccctcacc
gcagagctctcaagccggctgtcaagtgcttctgacttgactgcgttcagtgacccccgg
gtgggaatcgaccgctccttctcggcgctcccctccatctccgaccctcggatgcactac
ccgggagcgttcacctacacgccgacgcccgtcagttcagggataggaattggtatgtct
gccatgtccacagccacgagataccacacttacctcccacctccctaccctggctcgtcg
caggcccaaggcagcccgttccagaccagctcaccctcctaccacctctactacggaacc
tctgccggctcctatcagttctccatgatctcggggggagaccggtccccaccacgcatc
caccccccctgcaccaacgcctccacgggatcgacgctcctcaaccccaacctccccaac
caaagcgaggtggtcgaggcagaagggagccacagcaactcccccactaacatggccacc
acggcgaggctagaggaagcggtgtggcgaccatactga
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