Chroicocephalus ridibundus (black-headed gull): 134520665
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Entry
134520665 CDS
T10910
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04350
TGF-beta signaling pathway
crid04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134520665 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134520665 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134520665 (NEO1)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
DCC/UNC5 family
134520665 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Tissue_fac
fn3_2
SusE
TMEM154
TM_ErbB1
EphA2_TM
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
134520665
NCBI-ProteinID:
XP_063202424
LinkDB
All DBs
Position
9:complement(27050528..27263552)
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AA seq
1472 aa
AA seq
DB search
MAAGRARRLLSSLWIALLLGQPEPAGAAARSGSQSLLTGSLVRTFTPFYFLVEPMDVLSV
RGASVIMNCSAHCETSPKIEWKKDGTFLNLVSDDRRQLLPDGSLLINSVVHSKHNKPDEG
YYQCVATVESLGTIVSRTAKLTVAGLPRFTSQPESSSVYKGNSAIINCEVNVDLAPFVRW
EQDRQPVFLDDRVFKLPSGALIISNATEMDGGLYRCVIESGGTPKYSDEAELKILPDPEV
AQKLVLVRPPSSLTRVTGQSAVFPCVAMGFPTPSIRWTRNAEELITEGYERLLLLAGGSL
EISDVTEEDVGTYTCIADNGNETIEAQAELTVQVPPEFLKRPTNIYAHESMDIVFECEVT
GKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQAGAQL
IILDLDVAIPTLPPTSLTSATNDHLAPATTGPLPSAPRDVVATLVSTRFIRLTWRTPVSD
PQGDNLTYSIFYTKEGINRERVENTSRPGETQVTIQNLMPETVYVFRVVAQNKHGPGESS
APLKVATQPEVQLPGPAPNIRAYASSPTSVTVTWETPLAGNGEIQNYKLYYMEKGQDTEQ
DVDVGGLSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVVVRTLSDVPSAPPQNLTLEVR
NSKSIMLHWQPPPAGTHSGQITGYKIRYRKASRKSDVTESIGGTQLFQLIEGLERGTEYS
FRVAALTVNGTGPATDWVSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPPENQNI
VVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAV
TRPHSDTSEVDLFVINAPYTPVPDPSPMMPPVGVQASILSHDTIRITWADNSLPKNQKIT
DARYYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAH
GTTFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV
IEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKAESSDKMPNDQAS
GSGGKGSRPVDIGADYKPPLGGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVIVVIVAVF
CTRRTTSHQKKKRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMT
DTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPP
QPVISAHPIHSLDNPHHHFHSGSLASPTRSYLHHQVNPWPIGTSMSHSDRANSTESVRNT
PSTDTMPASLSQTCADHQDPESTPGSYLANAQEEDSAQNLPTAHVRPSHPLKSFAVPAVP
PAGSTYDPALPSTPLLTQQAPNHPVHSVKTASIGTLGRTRPPMPVVVPSAPDVQETTRML
EDSESNYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggagagcccgacggctcctcagctccctctggatcgcccttctcctcggg
cagccggagccggccggcgccgccgctcgcagcggctcacagagcctcctcacaggatcc
cttgtgagaaccttcactcctttttattttctggtggagccaatggacgttctgtcagtt
cgtggcgcttctgtcatcatgaactgttcagctcattgtgaaacttctccaaaaattgaa
tggaaaaaagacgggacttttctaaacttggtgtcagatgaccgtcgccagttgctacca
gatggatctttattaataaacagcgtggtgcattccaagcataataaacctgatgaagga
tattatcagtgtgtggcgactgtggaaagcctggggaccattgtcagcagaacagcgaag
ctcacagtagcaggccttcccaggttcaccagtcagccagaatcttcatctgtctataaa
ggaaacagtgcaatcatcaactgtgaagtcaacgttgaccttgcaccgtttgtgaggtgg
gagcaggatcgccagccagtctttctggatgatcgtgtatttaagttgccaagtggagct
ctaattattagcaatgctactgaaatggatggaggactctatcgctgcgtcattgaaagt
ggtgggacccccaaatacagtgatgaagcagagctcaagattcttccagatcccgaggtg
gcgcagaagttggtgttggtgaggccgccctcttcgcttaccagggtgacggggcaaagc
gccgttttcccctgtgttgccatgggatttccaactccatccatcaggtggacaagaaat
gcagaagagcttatcacagaaggctatgaaagactacttctgcttgcgggaggaagcctg
gagatcagtgatgtgacagaagaggacgtcgggacgtatacctgcatagccgataatgga
aacgagacgattgaagctcaggcagaacttacagttcaagttcctcctgaattcctgaag
cggcctacaaatatttatgctcatgaatctatggacattgtgtttgagtgtgaggtgact
ggaaaacctactccaactgtgaaatgggtcaagaatggagacatggtgatcccaagtgac
tacttcaaaatcgttaaagaacataatctgcaagttttgggtctggtgaaatcagatgaa
ggattctatcagtgcattgcagaaaatgatgttggaaatgcgcaggctggagcccagctg
ataatacttgacctcgatgttgccatcccaacattacctcccacttcactgaccagtgcc
actaatgaccatctagcaccagctacaacaggaccattgccttcagccccgcgggatgtc
gtggccaccctcgtctccactcgcttcatcagactgacatggcggacgcctgtttccgac
cctcaaggcgacaacctcacctattcaatcttctacaccaaggaaggtataaacagggaa
cgtgttgaaaatacaagtcgtcctggagagacacaagtgacgatccagaacctgatgcca
gaaacggtttatgtctttcgcgttgtggctcagaacaagcacggccccggcgagagctct
gcgccgctgaaggtggcaacccagcctgaggttcagcttcctggtccagcacccaatatc
cgagcgtacgccagctcacccacctccgttactgtcacctgggaaacgccgctggctggc
aatggagaaatccagaactacaagctctactacatggagaaaggccaggacactgaacag
gatgttgatgtaggaggactctcctacaccattaacggattaaagaaatacacagagtat
agtttccgagtggtagcttacaataaacacggtcctggagtctcgacgcaagatgtggtt
gtacgaacgctgtcagacgtccccagtgctccaccacagaatctaacgctggaggtacgg
aactccaagagcatcatgctgcactggcagcctcctcctgcggggacacacagcgggcaa
atcactggctacaaaattcgctaccgtaaggcgtcccgcaagagtgacgtaacggagagc
atcggtgggacccagctgtttcagctgatcgaaggtcttgaacgaggcacagaatacagc
ttccgagtagctgccctgaccgttaacgggactggacctgccaccgactgggtatcagcg
gaaacgtttgagagtgacctagatgaaacccgtgttcctgaagttccgagttccttacat
gtccgtccgcttgtcaccagcatcgtagtaagctggactccacccgagaaccagaacatc
gtggtgagaggctacgccatagggtacggcattggcagtccccacgcgcagaccatcaag
gtggactataagcagagatactacaccattgaaaacctggacccgagctcccactatgtc
ataactctgaaggcgtttaacaacgttggtgaaggaatccctctgtacgagagcgcagtc
acccgcccgcactcagacacttccgaggttgatttgtttgttattaatgctccatacact
ccagtgccagatccgtctcccatgatgccaccggtgggagttcaggcttccatcctgagc
cacgacaccatacggatcacttgggcagacaactctctgccgaagaaccagaagatcaca
gatgctcgctactacacagtccgctggaaaaccaatattcctgcaaatacgaagtacaag
actgcgaatgcgaccactttgagctatttagtgacggggttaaaacccaacaccttgtat
gaattctccgtgatggtgactaaaggtcggagatcgagtacttggagcatgacagcacat
ggaacgacttttgaattagttcctacctctcctcccaaagacgtgactgtggtgagcaaa
gagggaaaacctcggacaataattgtgaactggcagcctccctccgaagccaatggcaaa
attacaggctacatcatttactacagtacggatgtgaatgctgaaatacacgactgggtt
atcgaacccgtcgtgggaaacagactgacccatcagatacaggaattgaccctcgatacg
ccctattatttcaaaattcaggcccgcaactcgaagggcatggggcctatgtctgaggcc
gttcagttcagaaccccaaaagctgaatcctcagataaaatgcctaatgaccaagcgtca
gggtctggagggaaaggaagccgcccagtggacataggagcagattacaaaccaccgctt
ggtggcagtaacagtccccatggaagtcctacttctcccctggacagcaacatgctcctt
gtgatcatagtgtctgttggagtcatcaccattgtgatagtggtgatagtcgccgtcttc
tgcactcgtcgtacaacttcccaccaaaaaaagaaacgagctgcctgcaaatcagtgaat
gggtcccataagtacaaaggaaactccaaagatgtcaaacctcctgacctctggatccat
cacgaaagactggagctaaaacccattgataaatctccagatcccaatccgatcatgaca
gataccccaatccctcgcaactcccaagacatcaccccggttgataattccatggacagc
aatatccatcagaggcggaattcttacagagggcatgagtcagaggacagcatgtccacc
ctggcgggaagaagggggatgaggcccaagatgatgatgccttttgattctcaaccacct
cagcctgtgattagtgctcatcccatccattcactcgataaccctcaccatcatttccac
tccggcagcctcgcttctccaactcgcagctatctccatcaccaggtcaacccgtggccg
attggcacatccatgtcccattcagacagggccaattccacagaatccgttcgaaacaca
ccgagcacggacacgatgccggcttccttgtctcagacatgtgctgaccaccaggatccc
gaaagcaccccggggtcttacctggctaatgcacaagaagaggattcggctcagaacctc
ccaacggcacacgtccgtccttcccacccgctgaagagttttgcggtgccagcggttcca
ccagctggttccacgtacgaccctgcgctgccaagcacaccgctgctgactcagcaagct
cctaaccatccagttcactcggtgaagactgcgtcaattgggactttaggaagaactcgg
cctcccatgccagtggtggttcccagtgcccctgatgtgcaggagaccaccaggatgctc
gaggactcggaaagcaattacgaaccggatgagctgaccaaagagatggcccacctggaa
ggacttatgaaggaccttaatgccatcactacagcatga
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