Chroicocephalus ridibundus (black-headed gull): 134520673
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Entry
134520673 CDS
T10910
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134520673 (DENND4A)
Membrane trafficking [BR:
crid04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134520673 (DENND4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
134520673
NCBI-ProteinID:
XP_063202444
LinkDB
All DBs
Position
9:complement(47388243..47443523)
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AA seq
1887 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVINKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
TTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQRSQLGLAAAVEGK
SDTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPS
PQRPRILVQLSPHDSLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDP
PPDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLSNLYQQLAELQQRPREDALM
ELAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFE
LQGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGET
RLIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLDLFERPEGFLTAPNN
KLSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYV
KVCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAG
IDPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKQPASTSHTAI
PGGLSDFGNNTSFKEEARQGKTCLQDIQEQKEDKRESDSSSLSEVESTKGSGDCLPKLNY
QNSSNEKATSSIVRLNGTVDSTVAEASTESSVGLLFTSSFEGASEAEVIKSKSLRKRHKS
AVEPAVREISWESRNRNLSGDGLVGLMINRINQEANPGEIVEKLGADAKILSSALQKSMR
PKTLNIRNSSLESKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDLDAEPETSTAVKP
SSEKSRRLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEDEDDDDDRSVSTPSARR
DLAEEIVMYMNNMSSPLSSRAPSIELQKPWDDRNANKKSPTVIQPCRRSSLPPNSPRPLS
LTKSKSYHAKNEERPRDRLWSSPAYSPHSPAKEQPQDATSTLTLVSSPSFNLDTLLTPKF
DVLKSSMFSAGKGVAEKASKWYSKFTMYAASSKDQNSDRASVSSLGALDSESTSLTDEDV
CNDFESASPQENTASEIKGIGLSRTSLESSASHDGSAKHFDQCGSLSKFPLPDKSELISS
CSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLP
FLSIEIRDLRRPGRYFLKSSPSTENMQFPSLFSNQSGKSCNTAATVGLTTSLMSVQEDLN
SNSKSKQHDNICARSIQIPSGRRQNTSGSECTSHPVARSISTFGPLEEDEKENQKISHII
PTGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFV
DHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWDNM
KLHQDPRQPLYILWNAQSQNRTLLFETQKYPMVHLLQKDDDSFNQELLRSMVKSIKMNDV
YGPMSQILERLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKLAYDRLTANQ
VKNTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggctcgtgttgctgactactttgttgtcgcaggattaacagatatt
tcaaaaccactagaggaagaaatccacttcaatgatgcttgccataaaatcgctaaacca
aaagaacctattacagatgtaacagtaattaataaatccctgggggaggaagttccccag
ggatataaatgcatagatgttactccctcgggactgtctgcagatctcaataatggcagt
cttgtgggaccacaaatatatctttgttatcgccgaggaagggataagcccccacttact
gatctgggggttttatatgatgggaaagaaagagtaaagcaaggctgtgaaataattcaa
actactccatatggtcggcctgctaatattagtggcagtgcctcatcacaaagagtgtac
atcacttaccgaagagcatccgaaaacatgacacaaaacacgttggctgttacggatata
tgtataatcataccaagtaaaggagaaacccctccacatacattctgcaaggtcgacaag
aatcttaataatagtatgtggggctcagcagtatatttatgttataaaaagtctgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagatatcctgaagaagattat
gaatcattcccattaccagaatccgtgcctcttttttgtctacctatgggtgcaacgatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaactgtatcctgaa
gagaatctcacagagaaacaaagatctcaactgggattagcagctgctgttgagggaaag
tcagacacatgcagaacagttcaaacaaataaatgcatctgtctcctctctcactggcct
ttctttgatgctttcaagaagtttcttacctttctctatcgttactccatttctggtcca
catgtcctacccattgagaaacacatttcccatttcatgcataaagttccttttccatcc
cctcagaggccaagaattctagttcagttatcgccacatgacagcctgattcttagccaa
cctgtgtcatcaccccttccactgagcgggggcaagttttctacactacttcagaattta
ggacctgaaaatgcagtaactctacttgtatttgctgtgacagagcataaaattctcatc
cattcattgcgaccttctgtccttactagtgtgacagaggcattagtctctatgatattt
cccttccactggccttgcccatatattcctctctgtcccttggcactggcagatgtgtta
agtgcaccatgcccattcatagtgggaattgattcaagatactttgacctctatgaccct
ccaccagatgttagctgtgttgacctagataccaatacaatttctcaaactggagataag
aaagctatcgcatggaagatcttaccaaagaaaccctgtaaaaatctgatgaacacttta
agtaatttatatcagcaactagcagaattgcaacagagaccaagagaagatgcgttaatg
gagttggcaatgaatgactatgactttaattctgggaagaaattgcatctgctagatttg
gagatccaggaagcattcctgtgtttcatggcctccatactaaaaggttacagatcttat
ctcaggccaataacagaggcaccctctgaaacagccacagatgcaagttctctctttgaa
ctacaaggtttcctcaaaagtcgagatcgttcgcatcagaagttttacacactgatgacc
aaaactcaaatgttcattcgcttcattgaagaatgttcttttgtcagtgacaaggatgca
agccttgcattttttgatgactgcgtagataaagtagatatggacaaaactggggaaaca
cgactaatagagctggatgagtcatacaagagtgagcatacagttttcataacaccaccc
gagatccctcatctgccaaatggtgaggagcatcctctacaatacagctataatggattt
ccagtattaaaactagatctgtttgagcgacctgaaggatttctcacagcaccaaataat
aaactgtcctcgaaagccagtagtcccaacagtccgtcaccaatgttcagaagaactaag
caggaaattaaatctgcgcataaaattgctaagaagtactcatccataccccagatgtgg
tccaggtgtttgttacgtcactgctatggtctttggtttatctgccttcctgcctatgtg
aaagtgtgccattcaaaagtcagggctctgagaaccgcatatgatgtgctacagaaaatg
cataccaaaaaaatagatccacccgatgaggtatgctaccgagtactcatgcaactgtgt
ggacagtatggtcagcctgtgctagcagtgagagtgctttttgaaatgcagaaagctggt
attgaccctaatgccattacttatggctactacaataaggctgttttggaaagtacctgg
ccttcaagcaatcgaggtggctatttcctatggatgaaaatacgaaatgttgttttagga
atagcacagtttaaaaaagcattgaaaaagcaaccagcaagcacttcgcatacagccatt
cctgggggactttcagacttcggcaataacacatcattcaaagaagaagccaggcaaggg
aaaacttgccttcaagatatacaagaacaaaaagaggacaagagagagagtgactccagt
tctctgtctgaagtggagagcacaaaagggagcggtgactgcctacctaaactaaattat
cagaactcaagtaatgagaaagccacttcgagcatagtgcggctcaacggtacagttgac
agtaccgtagcagaagctagcacggagagttctgtaggattgctgtttacatcatctttt
gagggtgccagtgaagcggaagttataaaaagtaaatccttaagaaagagacataaaagc
gcagtagaacctgccgtaagggagatatcatgggaaagcaggaaccgtaatctgagtggc
gatggcttagtgggactcatgataaatagaataaatcaggaagcaaaccctggagaaatt
gttgaaaaactaggagctgatgccaaaatcctatcgagcgcattgcagaaaagcatgagg
ccaaaaactcttaatatcagaaattcctctttagaatctaagagagaaagcctggagaaa
gaatctagtgatgaagatgcagcttttgattgcagttttacagataaaacagagtctcct
gttatttttgatctggaagacttggatgcggaacctgaaacatctacagcagtgaaaccc
tccagtgaaaaatctagaaggctgcaaagaaagagcagctttccagtaaagccagttgaa
aagacagatgttgaaactggatttgatccattgtctctgctggttgccgagacagaacag
cagaaagaggatgaggacgatgatgatgatagaagtgtctctactccgtctgcaagacga
gatttagctgaagaaatagtcatgtacatgaacaatatgagcagccctttgtcaagtcgt
gccccaagcattgagttgcaaaaaccctgggatgacagaaatgctaataaaaagagccca
acagtaatccaaccttgtaggaggtccagccttcctccaaactccccaaggccattgagt
cttaccaaatccaagagttatcacgcaaaaaatgaagaaaggccaagagacaggctttgg
tcctccccagcttattccccacacagtccagcaaaggaacagccacaggatgcaactagc
acattaacacttgtgtcttcaccgtcattcaacttggatactctgctaacacctaaattt
gatgttctaaaaagcagcatgttttctgctggaaagggggttgcagagaaagctagcaaa
tggtactcaaaatttacaatgtatgctgcatcctcaaaggatcaaaattcagaccgagca
agtgtttcatctcttggagctctggactcagaatctacttctctaactgatgaagatgtc
tgcaatgattttgaaagtgcttctcctcaggagaatactgcatcagaaattaagggaatt
ggcctcagcaggacaagcctagaaagctcagcttcccacgatggctcagcaaaacatttt
gaccagtgtggttctctttccaagttccctttacctgacaaatcagagttgatatcttct
tgcagtacaagtagtaccagtgtgtttcagaactacgctatggaggtcctcatctcaagc
tgttcacgatgtcgaacttgtgactgtttagttcatgatgaagaaatcatggcaggttgg
acagcagacgattcaaatctcaataccacatgtccattctgtggaaatttatttctgcct
tttttaagcatagaaatccgagatcttcggcgacctggacgttatttcctgaagtccagc
ccttctacagaaaacatgcagtttccatcacttttttcaaatcagagcgggaagtcctgt
aacaccgcagctacggtcggccttactacgtctctaatgtccgttcaagaggatttaaat
tcaaatagcaaatctaagcagcatgacaatatttgtgccagaagtatccagatcccctca
ggaagaagacaaaatacctctgggtcagaatgtacaagtcaccctgtagcaaggagtatc
agtacttttggtccattggaagaagacgagaaggaaaaccagaagatcagccatatcatt
cctactggtagcctacctgctactttgcaaggaccaacagattccttgggcctggaatgg
cgcttacctagtcctgatcctataacagttccttatctcagtcctctggtggtgtggaaa
gagcttgagagcttacttgaaaacgaaggggatcatgcaataacagtggccgactttgta
gatcatcatcctattgtgttctggaatttggtgtggtatttcagacgcttggacttgccc
agcaacttaccaggattaatcctttcttctgagcactgtaataaaaactccaagattcca
cgaaattgtatgtcagaggacagtaaatatgttcttattcagatgctgtgggacaatatg
aaattgcatcaggatccaaggcagcctctgtatattttgtggaatgctcagagtcaaaat
cgcactcttttgtttgagacccagaagtacccaatggttcatttattgcaaaaagatgat
gactcttttaatcaggagctcttgagaagtatggtgaaaagcattaagatgaatgatgtg
tacggaccaatgagtcaaatattggagagactgaacaaatggccacatattaaaagacag
cggagcctttacagagaaatactgtttctttcgcttgttgccctaggaagagataacatt
gatatagatgcttttgacagagagtacaaactggcctatgatcgtctcaccgccaatcaa
gtgaaaaatactcataattgtgatagaccaccaagcactggagtgatggaatgcagaaag
atttttggagaaccgtatctttaa
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