Chroicocephalus ridibundus (black-headed gull): 134520700
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Entry
134520700 CDS
T10910
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134520700 (PCDH19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134520700 (PCDH19)
Cell adhesion molecules [BR:
crid04515
]
Cadherins
Protocadherins
134520700 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Ig_Cad99C_N
Cadherin_FAT4_N
PepSY
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
134520700
NCBI-ProteinID:
XP_063202498
LinkDB
All DBs
Position
9:19264856..19324367
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AA seq
1096 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPTAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQAKDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQ
DQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCS
TKRTFATFGKEGGEPLAEERLANPKGKRTVDPAACSPKVSGAVREAGNGCEAVSPVTSPL
HLKSPLAGKPAASYGAGHCVGNREREPFGNSGPSRPTEAEPRGADSESGGQEGNPLLQER
RDKDSPGARRLKDIVL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctgggggccgccttgctgtgggccggcgccggggccctc
gtcaacctgaagtactcggtggaggaggagcagcgggccggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccggtttcgttctggacccccgtcagcccactgccttccga
gtggtctccaactcggccccccacctggtggacatcagccccgggtcggggctgctggtg
accaagcagaagatcgaccgggacctgctgtgccggcagagccccaagtgcgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctc
aatgacaatgcacccagcttccccaccgaccagatcgagctggagatctcggagacggcc
agccccggcacccgggtgccgctggagagtgcctacgacccagactcgggcagctttggt
gtgcagagctatgagatcacccccaacgacctctttgggctggagaccaagacgcggggc
gatgggtcccgctttgccgagctggtggtggagaagagcctggaccgcgagactcagtcc
cactacagctacgtgatcacggcgctagatggtggtgacccgcccaactttggcacggtg
gagctcagcatccgcgtcatcgactccaatgacaacaacccgctcttcgaggagccggcc
tacaccgtcagcgtgcctgaaaacgccccgccgggtacgccggtcatccgcctcaacgcc
tccgacccggacgagggcaccaacggccaggtcctctactccttccacagctacgtttcc
gagcgggcccgggagctcttccagatcgacccccagagtggcctcatcacggtgagcggt
gccatcgactacgaggagggtcacgtctatgagctggatgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccatcagcgtccaggatgccaacgacaac
ccgccgcttatcaacctgctctccgtcaacagcgagctggtggaggtgagcgagaacgcc
cccccagggtacgtcatcgccctggtgagggtctcggaccgtgactccggggccaacggg
cgggtgcagtgcaagctcctgggcaacgtgcctttccgcctgcaggagtacgagagcttc
tccaccatcctggtggatggcaggctggaccgggagcagagggaccagtacaacctcacc
atccaggccaaagacaatggtgtcccctccctgcaggccaccaagtcttttactgtcaag
atcaccgatgagaatgataaccatccccacttctccaagccctattaccaggtcattgtg
caggagaacaacaccccaggggcctacctcctctcagtctcggccagggaccctgacctg
ggcctcaatggcagtgtctcctaccagatcgtgccctcccaagtcagggacatgcctgta
ttcacctacgtctccatcaaccccaactctggagatatctatgctttgaggtccttcaat
catgaacagacgaaggcctttgagttcaaggtcttggcaaaagacgggggtaatccctct
ctgcagagcaatgccactgtcagggtgatcgtcctggacgtcaatgacaacacccctgtg
atcacagccccaccgctggtcaatggcactgcggaggtgtacatccccaggaacgcaggg
gtcggctacttggtgacagtggtcaaggcagacgactatgacgagggtgaaaatggcaga
ctttcctatgaaatggtggaaggagacaggggattttttgagatagaccaggtcaatgga
gagataaggaccaccagagcctttggggagaacgcaaagacagcctatgagctgatcgtg
gtggctcacgaccatggaaaaacatctctctcggcttctgccttgattttgatatacctg
tctccagccctggatgcccaggagtccataggatctgttaacctctccttgattttcatt
attgccctggggtctattgcagccattctttttgtcaccatgatcttcgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcagaatcgcagaatactcctac
gggcatcaaaagaaatcaagcaagaaaaagaagatcagcaagaatgatatccgcctggta
ccacgggacgtggaggagacggataaaatgaatgttgtgagctgctcctctctcacttca
tccctcaactacttcgattaccaccagcagaccctgccgttgggctgccgccgctctgaa
agcaccttcctcaatgtggagagccagaacaacaggaacgccggctccaaccacatttac
catcacaccttcacggggcagagcccccagcagcctgacctcatcatcaatgggatgccg
ctgccggagactgaaaattactccttcgattccaactacgtgaacagcagagctcattta
ataaaaagcagctccacgttcaaggacttggaggggaacagcctgaaggacagtggccac
gaggagagcgaccagacggacagtgagcacgacgtgcagcggggcctctactgcgacaca
gccgtcaacgacgtgctgaacaccagcgtcccctccatgggatcccagggccccgagcaa
gaccagagcgaagggttccactgcagggaggagtgccgcatcctgggccactcggaccgg
tgctggatgccccgcggcgccgtccccagccgcgccaagtcccccgagcatggcaggaac
gtcatcgccctctccatcgaggcgacggcggtggacgcggagccttacgcagactgcagc
acaaaaaggaccttcgccaccttcggcaaggaagggggcgagccgctcgccgaggagcgg
ctcgccaaccccaaaggcaaaagaacggtggacccggccgcctgcagccccaaggtgagc
ggtgccgtccgtgaggcgggcaacggctgcgaggccgtcagccccgtcacctcgcctctc
cacctgaagagccctttggccggcaagccagcggcaagctatggtgccgggcattgcgtc
ggcaaccgggaacgggagccctttgggaacagtggtccctcccggccgacagaggcagag
ccccgaggggcggacagcgagagcggggggcaggagggcaacccgctcctccaggaacgc
cgggacaaggactcgcccggcgcccggagactaaaagacatcgtcctctga
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