Chroicocephalus ridibundus (black-headed gull): 134520706
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Entry
134520706 CDS
T10910
Symbol
CHRNA5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134520706 (CHRNA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134520706 (CHRNA5)
Ion channels [BR:
crid04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134520706 (CHRNA5)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
134520706
NCBI-ProteinID:
XP_063202508
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Position
9:complement(30310374..30330369)
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AA seq
472 aa
AA seq
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MAELGAWSRCGRPFLLLTCLFAPFLAQPRAGSAARAPYAGISEPSFIAKSEDRLFKYLFD
DYQRWVRPVERLNDTIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYA
GITSIRVPSDSIWIPDIVLYDNADGRFEGTSTKTVVKYDGTIAWTPPANYKSSCTIDVTF
FPFDLQNCSMKFGSWTYDGSQVDIILEDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCW
YPFVTYSFIIRRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFL
LVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIF
LHKLPKLLCMRSHVDRYFAQREETGNTNGSESSRNTLEAALDSIRYITRHVVKENEVREV
VEDWKYIAQVLDRMFLWAFLLVSIIGSLVLFIPVIHKWASIIVPTHIGSANA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctcggagcctggtcgcgctgcggccgccccttcctcctcctcacctgcctc
ttcgcgccctttctcgcccagcccagagccggctccgccgcccgcgccccgtacgcgggt
atatctgaaccttcttttattgctaaaagtgaagatcgattatttaaatatttatttgac
gactatcaaagatgggttcgtccagtggaacgcttgaatgacacaataaaaataaagttt
ggccttgcgatctctcagctagtagatgtggatgagaagaatcaattgatgacgacgaat
gtctggttgaaacaggaatggatagacgtaaaattaaggtggaatcctgaagactatgct
ggaataacatctattcgtgtcccatcagattctatttggattccagatattgtattgtat
gacaatgcagatggacgttttgagggaacatctacaaaaactgtggtaaaatatgatggc
accattgcttggactccaccggcaaactacaaaagttcttgtactattgatgtaaccttc
ttcccctttgacctccaaaattgctctatgaaattcggttcttggacttacgatggctca
caggttgatataattcttgaagattatgatgttgacaaaagagacttttttgataatgga
gaatgggaaattgtgactgcaacagggagcaaaggaaataggactgatggatgctgctgg
tatccttttgttacgtattcatttataattagacgtttgccacttttttacacattgttt
ctcattattccttgtattgggctttcgtttctaactgtccttgtcttctatcttccttca
aatgaaggtgaaaaaatttcactttgcacttcagtactggtatctttgactgtttttctt
ctagttattgaagagattattccatcgtcttctaaagttatcccacttataggagagtac
ttggtgtttactatgatatttgtgacgttgtccattgtgataactgtctttgctatcaat
attcatcatcgctcttcatctacacacaacgctatggcaccttgggttcgcaagatattt
cttcacaaacttcccaagctgctctgcatgagaagtcatgtagatagatactttgctcag
agggaggaaacaggaaatacgaatggatcagaatcatctaggaacaccttggaagcagct
ctagattctattcgatatattacaaggcatgttgtgaaggagaatgaagttcgtgaggtt
gttgaagactggaaatatattgctcaggtgcttgatcgaatgttcttatgggcttttctt
ctggtttcaataattggatcacttgtgttatttattcctgttattcataaatgggcaagt
ataatagtacctacacatataggcagtgcaaatgcataa
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