Chroicocephalus ridibundus (black-headed gull): 134520886
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Entry
134520886 CDS
T10910
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134520886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134520886
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134520886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nup188_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
134520886
NCBI-ProteinID:
XP_063202829
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Position
9:6153453..6163542
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AA seq
573 aa
AA seq
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MSQFSFGSGAGGGGGFTFGTPKTAATTATTGFSFSTPASSGGFSFGSASQTASSSQPTGL
FSFSTPGTAAQPASFSFGTPAPASAAATPSASVFPLGANAPKLNFGSTTVTQATGITGGF
AFGSSVPTSVPSSQAAAPSGFTFGSTGTATTTAQSGTTGGFAFSSVTTSQAGTASSTIGT
AAPQVAPTGLTFGIAPTAAATTAATLGATTQSTAPFSLGGQPAGLNFGSLPSTAATSAPV
ATLATSTSQKPALSFGTKLGVTSTAATTAAAATTTTSILGSTGPTLFASIVSSSAPTSST
TTGLSLGAPSTGTAGLGTLGFGLKVPGTTAATTSTAASTTTASGFALNIKSLTTTGAIGA
GTSTTAVTTTTTTSAPPVMTYAQLESLINKWSLELEDQEKHFLHQATQVNAWDQTLIENG
EKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLTPLEESVKEQSGTIYLQHADEE
RERTYKLAENIDAQLKRMAQDLKDITEHLNTSRGPADTSDPLQQICKILNAHMDSLQWID
QNSAVLQRKVEEVTKVCESRRKEQERNFRFAFD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttcagcttcgggtcgggtgccggcggcggcggcggcttcactttcggcacg
ccgaagacggcggccaccacggccacgaccggcttctccttctctacgcccgcctcctcg
ggcggcttcagcttcggaagcgcgtcccagacggcgtccagcagccagcccaccgggctc
ttctccttcagcacgccgggcactgctgcgcagccggccagtttcagcttcgggacgccg
gccccggcgtccgcggccgcgaccccgtcagcgagcgtgttcccgctgggggcaaatgca
ccaaagttaaacttcggcagcaccactgtgactcaggctacgggaatcacagggggcttt
gcgtttggtagctctgtcccaaccagcgtgccctcaagtcaagcagcagccccttctggc
ttcacgtttggatctactggtactgccaccaccactgctcagtctgggacaactggaggg
tttgctttttccagtgttaccactagtcaggccggaacagccagttccaccattggcact
gcagctccacaagtagctcccacagggttgacctttggaatagcgcctacagctgcggcc
accactgctgccaccttaggagcgacaacgcagtcaacagccccctttagccttgggggg
cagcctgcagggctaaactttgggtcattgccttcaacagcagccacgagtgcccctgtg
gcaacgctggctacaagtaccagccagaaacccgccctgtcctttggaaccaaacttgga
gtaacatccacagctgctacaactgccgccgccgccaccaccacaacctccattcttggt
tcaacggggcctacgttgtttgcatctatagtgagttcttcagcaccaacatcgtctacc
accacgggcctctcacttggtgccccgtccactgggacagccggtcttggaacgcttggg
tttggattaaaagtccctggaacaacagctgccacaacaagcactgcagctagcactact
actgcttctggctttgctctgaatattaagtcattaactacgactggtgccattggagct
gggacttctacaactgccgtaaccaccaccacaacaaccagtgcgcctccagtgatgact
tatgcccagctggagagtttgataaacaagtggagtctggaactggaagaccaggagaaa
cattttctccatcaagcaacgcaagttaatgcttgggatcagactctgatagagaatggg
gagaagattacttcgttacacagagaagtagagaaagtgaagcttgatcagaagagactg
gatcaggaactagacttcattctgtcacagcagaaagagcttgaagacttgctgacccct
ctggaggagtctgtgaaggaacagagcgggactatctacttgcagcatgcggatgaagaa
cgggagaggacctataaactggctgaaaacatagatgctcagttgaagcgtatggcacaa
gatctgaaagacatcactgagcacttgaatacatcaagaggcccagcagacacaagtgac
ccgcttcagcagatctgtaaaatcttgaacgcacacatggattcattgcagtggattgac
cagaattcagccgtgttgcagagaaaggtcgaagaggtgaccaaggtttgtgagagccgc
cgcaaagagcaagagcgcaattttcggtttgcatttgactga
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