Chroicocephalus ridibundus (black-headed gull): 134520924
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Entry
134520924 CDS
T10910
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134520924 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134520924 (MYO5C)
04131 Membrane trafficking [BR:
crid04131
]
134520924 (MYO5C)
03029 Mitochondrial biogenesis [BR:
crid03029
]
134520924 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crid04812
]
134520924 (MYO5C)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134520924 (MYO5C)
mRNA cycle factors
P-body specific factors
134520924 (MYO5C)
Membrane trafficking [BR:
crid04131
]
Others
Actin-binding proteins
Myosins
134520924 (MYO5C)
Mitochondrial biogenesis [BR:
crid03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
134520924 (MYO5C)
Cytoskeleton proteins [BR:
crid04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
134520924 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
PRK
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
134520924
NCBI-ProteinID:
XP_063202878
LinkDB
All DBs
Position
9:36510877..36547271
Genome browser
AA seq
1736 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHMQLEDGTELNYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQCYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTRMGGSTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVGITAVGDDRSSISLEDKHLNIFCE
LLDLNCDKMAQWLCHRKIITTSETVIKPMTKTQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGRDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCEIFFQDNPVSVSPF
SSTINIKSARPVLKSPNKQLRMTVGNKFRSSLSLLMVTLNATIPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIV
LQRLIQDHNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIMIQKSIRGWLQRKKFLRIK
QAAITIQQYFRGQRTVRQAITARTLKQTWAAIIIQKYCRGYLVRRLCQLILVAAVTIQAY
TRGFLARKKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEE
QSRENHGLLERLTNLASTHMSDVDMIQKLELDLEKLTAQKRIYEEKGKKYKEDSEQKILK
LENLNKELQEQKETLEIKLQEKTEEMKEKMDDLTKQLFSDVQKEENQRMILEKNFQNQKQ
DYEKEIELLKGEIKTLKEEKTQLQHQIQQEIVIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAQSQKRELREKMSEVAKQLLESYDVEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVSELENQKLDLENRLQEQTVKLKEMSNRLHYELEGDRTQRRTN
EAQNEIDIKEKERLKVTTQEIEGLSNGLMQDEIQDEVKSKIKQETTRLTVENMDLEEKLD
MKDRIIKKLEDQIKTLTKTLEKTEAHVPTLSKEYVGMMEYKKEDEDRIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLSFWLS
NTYYFLNCLKQYSGEEEFMKSNTPRQNKNCLKHFDLSEYRQILSDLAIRIYYQFIIVMEN
NIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNG
LDSELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSN
AKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPS
FVRKVQAMLHNREDVPQLMLDTKYLFQVTFPFTPSPHALEMIQVPSSFKLGFLTRV
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacccagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctccacatg
cagttagaagatggaactgaacttaattaccctgttgatccagctgctttgccaccccta
cgaaatcctgacatacttgttggagaaaatgatctcactgcacttagttatctccatgaa
ccagctgttctacacaatcttaaagttcgttttgtggagtctaagcttatctacacctat
agtggaataattttggttgcaataaacccctataagcagttgccaatatatggagatgct
attatccatgcatatagtgggcaaaacatgggggacatggatccacatatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtctgcaagatacactatgagatactttgccact
gtgagtaagtcaagcagcaatgcacatgtggaggataaagtattggcgtccaatccaata
accgaggctgttggcaatgcaaaaaccacacggaatgataatagcagtcgatttggaaaa
tacactgaaatcagttttgatcagtgttaccaaatcattggagctaacatgagaacatac
ctgcttgagaagtccagagttgtctttcagtcagagaatgagagaaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatttaagcatctgaaattgggaagtgca
gaagaatttaactacacaagaatgggtggcagcacagtaatagaaggagttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaagggggattttcag
atggatgtttttaaaatgctggcagcaatcctgcacttaggcaatgtgggaataacagct
gttggagatgacagatcatccatcagtctggaagataaacatctcaatatattctgtgaa
cttttggatttaaactgtgacaaaatggcacaatggctttgccaccgaaagattatcact
acctcagagactgtaataaagccaatgacaaagactcaggctgttaatgcaagggatgct
ctggcaaagaagatctattctcatttatttgactttattgtggaaagaattaaccaagct
ttgcagttccctggcaaacaacatacttttattggtgttttggacatttatggctttgaa
acatttgatgtgaacagttttgaacaattttgcatcaattacgctaatgaaaaactgcag
cagcaatttaacctgcacgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttctatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagagtgcttgttacctcatggaagagacgaaaac
tggcttcaaaagctgtataataattttgtcaataaaaacgcactctttgaaaagccgagg
atgtcaaacacatctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacatgaagtattgattgaaatcttgaaagag
agcaagtttcatctgtgtgaaattttttttcaagacaatccggtgtccgtttcacctttc
agttcaactataaacatcaaatctgcaagacctgttctcaagtcacctaacaaacagctc
cggatgactgttggcaataagttccggagttctttgtctttacttatggtgacactgaat
gcaaccatccctcattatgtacgatgcataaagccaaatgatgagaagttgccttttgag
tttgattcaaaaagagtggctcagcaactgcgagcgtgtggtgttttggaaactattcgg
attagtgcacagagctacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggaactctccataaatgataagaagcagatttgcaagattgtt
ttgcagcggctaatccaggatcataaccagtatcagtttgggagaacaaaaattttcttc
agagcaggacaggttgcttacttagaaaaactgcgatcagataaactgagacatgcatgc
atcatgatccaaaagagtattcgaggctggctgcagcggaagaaattccttcgcataaag
caagcagctattacaatacagcagtatttccgggggcagcggactgtacggcaagctata
actgcaagaactctgaagcaaacatgggcagctataataattcagaaatactgtcggggt
tacctggtccgtagactttgccagctcatccttgtggctgctgtaacaattcaagcttat
acaagaggatttctagcaagaaaaaaataccggaagatgctcgaagaacacaaggctgtg
atccttcagaaatacgcccgtgcatggcttgccaggcgcagatttcagaatatccggcgg
tttgtattgaatatccagctttcctacagagttcagcagctgcagaaaaagatagaagaa
cagagtagagaaaatcatggtttgctggaacgattgaccaatctggcttcaactcatatg
agcgacgtggatatgattcaaaaactggaattagatcttgaaaagttaactgctcaaaag
agaatatatgaagagaaagggaaaaaatataaagaggacagtgaacagaaaatcttaaaa
cttgagaatctgaataaagaattacaagaacagaaagagaccttagaaataaagctccaa
gagaaaactgaggaaatgaaagagaaaatggatgacctcacgaagcaactcttcagtgat
gtacaaaaagaagaaaatcagagaatgatacttgagaaaaatttccaaaatcagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagactctgaaagaagaaaaa
acgcagctacaacatcaaattcagcaagaaattgtcattcaggatggcttgaaaatggaa
gtaggacaacttacaaaacaagcccagaaaatacctgagttgcaaaaggaaatcgaactg
ctacagacacaaaaattggatgttgaaaagcaggcccagtcacagaagcgagagctgagg
gaaaagatgtcggaagttgcaaaacagcttcttgaaagttatgatgttgaagatgtaaga
agcagactctctacggaggacttagaacacttaaatgaggatggagaactgtggtttgct
tatgagggcttgaaaaaagctacaagagtattggaaagtcatttccagtcccagaaagaa
atatatgaaaaggagattgaaggtttgaactttaaagttgaacatcttagccaagatatt
aatcatctacaaaaattatttcgagaggaaaatgacataaatgatggtattcgacttgaa
gttagcagactaacttcagaaaacctggtgatcccagatcttaaacagcaagtttctgaa
cttgaaaatcaaaaattagatcttgaaaaccgccttcaagaacaaactgtaaagttgaaa
gagatgtctaatcggctgcattatgaactagaaggggatagaacacaaagacgaacaaat
gaggcccagaatgaaatagacataaaagaaaaagagaggctgaaagtcacaacccaagaa
attgaggggctgagcaatggtttgatgcaagacgaaatccaagatgaagtaaaaagcaag
ataaagcaagaaacaactcgacttactgtggaaaacatggatcttgaagaaaaactagac
atgaaagacagaataataaaaaaattggaggatcagatcaaaactcttaccaagactctt
gaaaaaactgaagctcatgtgccaactttgtccaaagagtacgttggaatgatggagtac
aaaaaagaggacgaagacaggatcattcaaaatctgatcctcgatctaaagccacgtgga
gttgtagttaatatgatacctggccttccagctcacatcctattcatgtgtgtgaggtat
gcagattacctgaatgatgctgacatgctgaaatctttcatgaatgtaaccattgatggt
atcaaacaagttgttaaggaacattcagaagactttgagatgttgtccttctggctctcc
aatacatactattttcttaactgtttgaagcagtacagcggggaagaggaatttatgaag
agtaacactccacgtcagaataagaactgtttgaagcattttgatctctcagaatacaga
caaattcttagtgatctggctattcgtatctattaccaattcattattgtaatggagaac
aacattcagcccatgatcgtaccaggcatgctggaatatgaaagtcttcagggaatttct
ggcttgaaacctacagggttccgtaaacgttcttctagtatagacgacacagatacctac
acaatgacctctatcctgcaacagctcagctatttttatagtactatgtgccagaatggc
ttggactctgagcttctaaagcaggcagtgaagcagcttttctttctgattggagctatc
accctcaatagtctcttcctccgcaaggacatgtgctcttgtagaaaaggaatgcagata
agatgtaatatcagctacttggaagaatggcttaaggacaagaatcttcaaaacagcaat
gccaaagaaactttggagcctctgtctcaagcagcctggctccttcaggtcaaaaagatc
acagatgatgatgccaaggaaatatgtgaacactgcacatctctttctactgtgcagata
gttaagattctcaactcatatactccaatagatgattttgagaaaagagtgactccatca
tttgttcgtaaagtccaggctatgctacacaatcgggaggatgttccacagttgatgctc
gataccaaatatctctttcaagtgacgtttcctttcaccccctctccacatgccttggaa
atgatacaagtccccagcagcttcaaacttggctttctcacaagggtttaa
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integrated database retrieval system
