Chroicocephalus ridibundus (black-headed gull): 134520979
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Entry
134520979 CDS
T10910
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134520979 (SOX1)
Transcription factors [BR:
crid03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134520979 (SOX1)
SSDB
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Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134520979
NCBI-ProteinID:
XP_063203064
LinkDB
All DBs
Position
1
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AA seq
376 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGGGGGNKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASG
GYAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGGHPHHPHPHHPHHPHNPQP
MHRYDMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALG
ALGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHY
QSASTGVNGTVPLTHI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggcggcggcggcggcggcggcggtggcggc
ggcggggggaacaaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtg
tggtcgcggggccagcggcggaagatggcccaggagaacccgaaaatgcacaactcggag
atcagcaagcgcctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttc
atcgacgaggcgaagcggctgcgagcgctgcacatgaaggagcacccggattataaatac
cggccccggcggaagaccaagacgctgctcaagaaggacaagtactcgctggccgggggg
ctgctgagcgccggctcggccgggggaggcccggccggcgtcggcgtgggcatgggcgtc
ggcgtcagccccggcggcgtcgggcagcggctggagagccccggcggcacggccagcggc
ggctacgcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggcggcg
gcggcggcggcggcgatgatgcaggaggcgcagctcgcctacagccagcacccgggcagc
ggggggcacccgcaccacccgcacccccaccacccgcaccacccgcacaacccgcagccc
atgcaccgctacgacatgggcgccctgcagtacagccccatctccaactcgcagggctac
atgagcgcctcgccctcgggctacggcgccctgccctacggctcccagccccaccagaac
tcggcggcggcggcggcggcggcagcggcggcggcggccgcctcctcgggggcgctgggc
gccctgggctcgctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcactcg
cgggccccgtgccccggggacctgcgggagatgatcagcatgtacttaccggccggggaa
ggcggggatccggcggccgccgccgcccagagccggctccactccctgccccagcactac
cagagcgccagcacgggggtgaacggcaccgtccccttgacgcatatctga
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