Chroicocephalus ridibundus (black-headed gull): 134521332
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Entry
134521332 CDS
T10910
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04510
Focal adhesion
crid04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134521332
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134521332
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_I
EzrA
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
134521332
NCBI-ProteinID:
XP_063203673
LinkDB
All DBs
Position
10:complement(19440624..19456363)
Genome browser
AA seq
1874 aa
AA seq
DB search
MDLLALALLLAGVPAAGGWQEPDLSHGCARGSCYPATGNLLVGRAPSLSATSTCGLDGPQ
EYCIVSHVQDSEKCFTCDSRDPSLLESHRIENVIYLSGPHGQRTWWQSENGVEHVSIRLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGRSWKVYRYFAYNCSKLFPGVPVQPSGLVD
EVLCDQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPSIQDLLRVTNLRVNLTKLHTLGDN
LLDTRREVLHKYYYAVDELVLRGSCFCHGHAAHCAPAPGVPTSSIPGMIHGRCVCEHHTQ
GLNCERCEDFYHDLPWRPAEGSSTNACRRCDCNEHSQRCHFDMAVYLATGNTSGAVCDGC
QHNTMGRRCHLCKPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQ
CRCKENVAGPRCDRCRHGAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFV
AGRSCSECVPEFWGLSYDVGGCRPCACDFGGAYNNRCSMEDGACPCRPHLMGRQCDQVQP
GFFCAPLDYYTYEAEQATGHGHDHPQLPVSLLGGSLRPQPRLVHGCHHAPCSMHGCHPVL
HVAVPVHGHPSLQGAIRAEVPQDCLEYDTGEPGGRKGRPRHQRSPPRPPQPRAPSRRNRQ
QPPKPDVEEVVRDGVGRMVTWTGSGFARVRDGAGLTFRVDNVPYPMDYELLLRYEPESTE
DWEAVVSVGSRVLPTSPRCGNLLPSEQMYRESLPHSQRYVLLSRPFCFEPSTPYEVTMRL
QRAGVTQRHPGAFILIDSLVLLPRVSELPGFHGAEAAAAARQEELERYRCLEAFRMAPPS
PLAQACARLVCSVSALLHGGALPCQCDPQGSRSSECQVQGGQCECKPHVLGRRCDHCAPG
SYGFGPLGCSPCACSPEGSVSQLCDAVSGQCRCQHGAVGRQCDQCQPGHWGFPACRPCQC
NGHAEECDPRTGSCLHCRDHTAGRHCERCQDGYYGDPVLGSGQQCRPCPCPGYPGTRHYH
GSACHADEETHHIVCLCAPGYAGPRCDRCSPGYFGMPEMEGGACRPCQCNNNIDASDPGA
CDPRTGHCLRCLYHTAGPHCAHCQPGYYGNALQRSCRRCSCDPRGTLVSHCTAGACACDR
GTGACACRPNVVGKSCDRCAPHFWSLGELGGCEPCGCHPTRALHPACDAVTGQCQCRPGF
GGRICSQCQEHHWGDPERECRACECEPLGAESPQCEQASGQCRCRPGFGGLRCDRCQRGY
QEAFPRCSPCHPCFGRWDPALGSLQDGLRRLGEQARALREGGSMPTLSPRRLRALEEALG
RVEQLLGEGGSPSGPLLNGLPGRLDGTRTELDDFWKQVQELEQHLDQLAQADVRHCDRLA
GLSHELGGLNRTASQLQILLGTVAAAGFSESYRSILGSAEDSRQAEAVANGTAGELSEAR
VTRRAAERVLRQQGDAFRRGTAAARKSLREAQKRVMGLSITRINEKICGAPGDRGCEEAP
CGGALCRNGTGTRHCGGTGCAGALPVSARALSSARNTSQQLEEALGQLGVVAQKTQEVQE
LARGARSRAEEALGRSQAARSRAEKATSQLRDFIRRIKAFLAEEGADPGSIELVARQVLN
ISLPSSPGRIQELLREMRESIGQLEGVDAVLNSTAQGLAAARGLLAQGQDARERAEGVRD
ELVGTQRALDAARVQATAAGSALRSAKDAIRAAESRAKEAERRLQALEGKESRAQRRLRE
LARHVTTLQERGQDVRRLAQQAKEGAQRATAASGTLSQDLAQVTQRYVVLKGRVSGLAGV
SGGALQRVTRLTAEARDLLDKANSSKRKLEELEQHFGANERVMAAKATRLQALEQRVWGL
LEEIRERANAYATC
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggacctcctggcacttgctctcctcctggcgggggtgccagcagcagggggctggcag
gagcctgacctgagccacggctgcgcccgcggcagctgctacccggccaccgggaacctg
ctggtggggcgagcccccagcctgagtgccacctccacctgcgggctggacgggccccag
gagtactgcatcgtcagccacgtccaggactcggagaaatgcttcacctgcgactcgcgg
gacccatccctgctcgagagccaccgcatcgagaacgtcatctacctgagcggcccccat
ggccagcggacgtggtggcagtcggagaacggcgtggagcatgtcagcatccgcctggac
ctggagggagagttccacttcacccacctcatcatgaagtttaagacattccgccccgcg
gccatgctggtggagcgctcagccgacttcgggcgcagctggaaggtctaccgctacttc
gcctacaactgctccaagctcttccccggtgtccccgtccagccctcggggctggtggat
gaggtgctgtgtgaccagcgctactccgagatcgagccctccagccacggggaggtcatc
ttcaaggtgctggacccctccatccctgtggcggatccctacagcccatccatccaggac
ctgctgcgcgtcaccaacctgcgggtgaacctcaccaagctgcacacgctgggcgacaac
ctgctggacacgcggcgggaggtgctgcacaagtactactacgctgtggatgagctggtg
ctgcgcgggagctgcttctgccacggccacgccgcccactgcgccccggcacccggtgtc
ccgacatcctccatccccggcatgatccatgggcgctgcgtctgcgagcaccacacgcag
gggctgaactgcgagcgctgcgaggacttctaccacgacctgccctggcgcccggccgag
ggctccagcaccaacgcctgccgccgctgcgactgcaacgagcactcgcagcggtgccac
ttcgacatggccgtctacctggccacggggaacaccagcggggctgtgtgcgacggctgc
cagcacaacaccatgggtcgccgctgccacctctgcaagcccttctactaccggcacccc
cgctccgacatccgctcccccaccgcctgtgccccgtgtgactgtgacccggcgggctcg
ctggacggaggcgcctgcgatgggcacacagacgtggcgctgggcatgattgcggggcag
tgccgctgcaaggagaacgtggccggtcctcgctgtgaccgctgccggcacggcgcctac
ggcctcagccatggcgacccgcagggctgccagccatgcaggtgtgacccacggggcacg
gtggcgggcagctccccctgcgaccctatcagcggggactgctactgcaaacgcttcgtg
gccgggcgctcctgcagcgagtgcgtgcctgagttctggggcctgagctacgacgtgggg
ggctgccggccctgtgcctgtgactttgggggagcctacaacaaccggtgctccatggag
gacggggcttgtccctgccgtccccacctcatggggcggcagtgcgaccaggtgcagccc
ggcttcttctgcgcccccctcgactactacacctacgaggccgagcaggccactggccac
ggccatgaccacccccagctcccggtgagtctcctgggggggtccctgcgcccccagccc
aggcttgtgcatggctgtcaccatgcaccgtgctccatgcatggctgtcaccctgtcctg
catgtggctgtccctgtgcatggccacccatccctgcagggtgccatccgggcagaggtg
ccccaggactgcctggagtacgacacaggggagccaggggggcggaaggggcgcccacgg
caccagcgcagccccccacgtcccccccagccccgtgccccctcgcgccgtaaccgccag
cagccccccaagccggatgtggaggaggtggtgcgggacggcgttgggcgcatggtgaca
tggacgggctcggggttcgcccgggtgcgggacggggctggcctgaccttccgcgtggac
aacgtgccctaccccatggactacgagctgctgctacgctacgagcccgagtcgaccgag
gattgggaggctgtggtcagcgtcggctcccgggtgctccccaccagccctcgctgcggg
aacctgctgccctccgagcagatgtaccgtgagagcctgccccacagccagaggtacgtg
ctgctgtcccggcccttctgcttcgagcccagcaccccctacgaggtgaccatgcggctt
caacgggccggcgtcacccagcgccaccctggtgccttcatcctcattgactcgctggtg
ctcctgccgcgggtgtcggagctgcctggcttccatggggctgaggcggcggcggcagcg
cgccaagaggagctggagcggtaccggtgcctggaggcgtttcgcatggcccccccgtcc
cccctggcccaggcttgtgcccgcctggtctgcagcgtctcagccctgctgcatggcggg
gcgctgccctgccagtgcgacccgcagggctcccgcagcagcgagtgccaggtgcaggga
gggcagtgcgagtgcaagccccacgtcctcggccggcgctgcgaccactgcgccccaggc
agctacggcttcggacccctgggctgcagcccctgcgcctgctccccggagggctcggtg
tcacagctgtgcgatgcggtgagtgggcagtgccggtgccagcacggcgctgtgggccgg
cagtgtgaccagtgccagcctggccactggggcttccccgcctgccggccctgccagtgc
aacgggcacgccgaggagtgcgacccccggacgggcagctgcctgcactgccgcgaccac
accgccggccggcactgcgagcggtgccaggacggttactatggggacccagtgctgggc
tcggggcagcagtgccggccctgcccctgccccggctaccctggcacacggcactaccac
gggagcgcctgccacgccgacgaggagacccaccacatcgtctgcctctgtgcgcccgga
tacgccgggccccgctgcgaccgctgctcccccggctatttcgggatgccagagatggag
gggggcgcgtgccggccctgccagtgcaacaacaacatcgacgccagcgacccgggggcc
tgcgacccccgcacggggcactgcctgcgctgcctgtaccacaccgccgggccccactgc
gcccactgccagcctggctactacggcaatgccctgcagcgcagctgccggcgctgcagc
tgcgacccacgggggaccctggtctcccactgcaccgccggcgcctgcgcctgtgaccgt
ggcacgggcgcctgtgcctgccggcccaacgtggtgggcaagagctgcgaccgctgcgca
ccccacttctggagcctgggggagctggggggctgcgagccctgtggctgccaccccacg
cgtgccctgcaccccgcctgcgatgcggtgacggggcagtgccagtgtcgacccggcttc
gggggccgcatctgctcccagtgccaggagcatcactggggagaccccgagcgggagtgc
cgagcctgcgagtgcgagccgctgggcgctgagagcccgcagtgcgagcaggccagcggg
cagtgccggtgccggccgggcttcggggggctgcgctgtgaccgctgccagcggggctac
caggaggccttcccccgctgctcgccctgccacccctgcttcgggcgctgggacccggcc
ctgggcagcctgcaggacgggctgcggcgcctgggggagcaggcacgggcgctgcgggaa
ggggggtccatgcccacactcagcccccgccgcctgcgggcactggaggaggccctgggg
cgcgtggagcagcttctgggcgaggggggcagccccagtggccccctcctcaatgggctg
cctgggcggctggatggcaccaggacggagctggatgacttctggaagcaggtccaagag
ctggagcaacatctggatcagctggcacaggcagatgtgcggcactgcgaccggctggct
gggctgagccacgagctggggggtctcaaccgaaccgcctcccagctccaaatcctcctc
ggcaccgtggcagcggccggattcagcgagtcttaccgcagcatcctgggatccgcggag
gactcgcggcaggcggaggcggtggccaatggcacggccggtgagctgagcgaggcacgg
gtgacgcggcgggcggccgagcgggtgctacggcagcagggcgacgctttccgccgtggc
accgccgcggcgcggaaatccttgcgggaggcgcagaaacgggtgatgggactcagcatc
accaggatcaatgagaagatttgtggggctcctggggaccggggctgcgaggaagcgcct
tgtggaggagccttgtgccggaacggcacagggacacgacattgcggtggcacggggtgt
gcgggggcactgcccgtctcggctcgagccctgagcagcgcccgtaacacctcacagcag
ctggaggaggcattgggtcagctgggtgttgtggcacagaagacgcaggaggtgcaggag
ctggcgcggggggcgcgcagccgggcggaggaggcgctggggcgctcgcaggccgcccgc
agccgcgcggagaaggcgacgtcccagctgcgggacttcatccgacgcatcaaggccttc
ctggcagaggagggagccgacccgggcagcatcgagctggtggcccggcaggtcctgaac
atctccctgcccagcagccccggccgcatccaggagctgctgcgggagatgcgggagagc
attggccagctggagggagtggatgctgtgctgaacagcacggcgcaggggctggccgca
gcacgggggctgctggcacagggacaagatgccagggagcgagcggagggcgtgagggat
gagctggtggggacgcagcgggcactggatgcagcgcgggtgcaggcgacggcagcaggg
agcgccctgcggagtgccaaggatgccatccgggcagctgagagcagagccaaggaggcg
gagcgcaggctgcaggcgctggaggggaaggagtctcgggcacagcggcggctgcgggag
ctggcacggcacgtcaccaccctgcaggagcggggccaggatgtccgccgtttggcccag
caagccaaggagggggcgcagcgtgccactgccgcctcagggacgctcagccaggacctg
gcgcaggtgacgcagcgctacgtggtgctgaagggccgggtgagcgggctggccggggtg
tccggcggtgccctgcagcgtgtgacacggctgacggcggaggcccgggacctgctggac
aaggccaacagcagcaagaggaagctggaagagctggagcagcacttcggggccaacgag
cgggtgatggcggcgaaggcaacgcgactgcaggcgttggagcagcgtgtctgggggctg
ctggaagagatccgggagagggccaacgcttacgccacctgctag
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