Chroicocephalus ridibundus (black-headed gull): 134521441
Help
Entry
134521441 CDS
T10910
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134521441 (TRAIP)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134521441 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T3SSipB
Crescentin
EXOC6_Sec15_N
DUF5305
OVT1
HIP1_clath_bdg
DUF713
Laminin_II
HMMR_N
Motif
Other DBs
NCBI-GeneID:
134521441
NCBI-ProteinID:
XP_063204000
LinkDB
All DBs
Position
10:complement(5560542..5584092)
Genome browser
AA seq
639 aa
AA seq
DB search
MEPVLPGHPSGPLGVFAGQSVPPMLSQSVPRRRPPPGLPRDTGQPTSRPHAPWVWGEEYH
AGPPGTCVHVWDRREGRQDRGGAPAGGAPGTPSSTQGPGGGHVAGGEGAQGPPAWGMPHG
PPRVVSGGSQMPTPSSPVPASLPRSCMPAGPALPAAAAGAPRAPRTPHAVSLANKDPAED
KLRQHQRRLPCLSVGPRVPASCLARRRLTQWFDTAPSRTCPQCRIQVGKRHIINKLFFDV
ALEEQTAPDAETLQNELDKVKAQLSMKEKEKRECQAVVDGLRDTLDVRNATIESLQKVLG
ETEMLCSSLKKQMKFLEQQQEDNRSSKEEARRLRNKLRSMERIELLLQSQRPEVEEMIRE
MGVGQAAVEQLAIYCVSLKKEYENLKEARKISSEMTEKLKKELFSVNNKLQKTVSELEKT
NEELKSTQKDLKNADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPTPVELRHPKL
HCPVHSDEINLDATFDVDTPEHQPCRSLFNPTKRQKLDKKPPPVVNLAKKVLKETVENWA
DDLEADALKGLLPTYIRNSVLAKKPSSGSLLGPHKNTGTVRMGYDGLGGRTKFIQPTNLS
EIRPLAVRSKKKNVSRPASAAPSASSSSSSQARLDSFLQ
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgtcctccccggtcacccctccggccccctcggtgtctttgccggtcagtct
gtcccccccatgctctctcagtctgtcccccgccgtcgtccccctccagggttgcccaga
gatacggggcagcccacctcccggccacatgccccgtgggtttggggggaggaatatcat
gcggggccccccgggacatgcgtgcatgtgtgggaccgcagggagggccgtcaggacaga
gggggggccccagcaggcggagcgccgggcaccccctcttcaacccagggccctgggggg
ggacacgttgcagggggtgagggagcacagggtccccccgcctgggggatgccacatggc
cccccacgagtcgtgtctggaggatcccaaatgcccactccttcctccccggtcccggct
tcccttcctcgcagctgcatgcctgcagggccggctctgcctgcggctgccgccggtgcc
ccgcgtgccccccgcaccccccacgctgtatctctggcaaataaagaccccgctgaggac
aaactgagacagcaccagcgccgcctgccctgtctctctgttgggcccagggtgccagca
tcctgcctcgcgcgccggcgtctcacccagtggtttgacacagcaccaagccgcacctgc
ccgcagtgcagaatccaggtcggcaaaagacacatcatcaataagttgttttttgatgtt
gccttggaggagcagacggcaccagatgcagagactttgcagaatgaactggacaaggtg
aaggctcagctctccatgaaagagaaagaaaagcgggaatgccaggctgttgtggatggg
ctgagggacacactggatgtgcgcaatgccacaatagaatcgctccagaaggtgctggga
gagacagagatgctgtgctcctctctcaagaagcagatgaaattcctggagcagcagcag
gaggataacagaagttcaaaggaagaggcccgccgtctgcgaaacaagctgagaagcatg
gagcggattgagctgttgcttcagagccagcgccccgaagtggaggagatgatcagagag
atgggagttgggcaggcagcagtggaacagcttgcgatctactgtgtctcgctgaaaaag
gaatatgaaaacttgaaggaggctcggaagatctctagtgagatgacagagaagctgaag
aaggagctgttttctgtcaataacaagctgcagaaaacggtttcagagttggagaagaca
aacgaggagttaaaaagcacccagaaggatctgaagaatgcggacaaggagatattgagt
ttgaagaagaagatagacatcctgcaggatactctgaaggtcccatctgtaaccagagag
acactcagtcgacttgtctttgaaagccccactcctgtggaactgcggcacccgaagctc
cactgcccagtccacagtgatgagatcaatctggatgccacttttgatgtggacacccct
gagcatcagccctgcagatcgctcttcaaccctacaaaaaggcagaagctggataaaaag
ccgcctcctgtggtaaatctggcaaagaaagttttgaaggaaacagtggagaactgggca
gatgatctggaggctgatgctcttaaaggactcctgccaacatacatcaggaactctgtt
ctcgccaagaagccatcttcgggtagcttgctgggtccccacaagaacacgggcactgtg
aggatggggtatgatggcttgggcggcagaacaaagttcatacagcctacaaacctgtca
gaaatccgtccgttagcagtgaggagcaagaagaagaatgtctccaggccagcgtctgca
gctccctccgcatcttcctccagcagcagccaagccagactcgacagtttcctgcagtga
DBGET
integrated database retrieval system
