Chroicocephalus ridibundus (black-headed gull): 134521532
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Entry
134521532 CDS
T10910
Symbol
CNTN6
Name
(RefSeq) contactin-6 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134521532 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
crid00537
]
134521532 (CNTN6)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
Contactins
134521532 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
crid00537
]
Others
134521532 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Sp38
V-set_CD47
C2-set_2
Pur_ac_phosph_N
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
134521532
NCBI-ProteinID:
XP_063204169
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All DBs
Position
10:complement(11866274..12014572)
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AA seq
1030 aa
AA seq
DB search
MVLLWKLISLLPFMSCSTGEETLHGPIFIQEPYDTTYSMDSANPEILLNCTAKGYPLPYY
RWKQNGTDIDLTMSYHYRLVGGSLAINNPHKKQDIGTYQCLATNSFGTILSRKAKLQFAY
LENFETKTRSTVSVREGQGVVLLCGPPPHYGGLSYTWIFNNNTLYVQEDSRRFVSQETGN
LYIAKVEPSDVGNYTCVVTNSEAEQSVRGPPTPLTLRSDGVMGEYEPKIEVRFPETTYAA
KGSSVKLECFALGNPVPSISWKRSDGNSLTKKIEHNKTKGVLEIPDVQQEDEGSYECVAG
NSRGRNIARGQLFVYALPEWDKKIQNAFLSLYDSLFWECKAKGKPSPSYSWLKNGQPLTS
EERIQIENGTLIIPMLNMSDSGLYQCVAENKYGTIYANAELRVIAAAPDFSKNPVKQMSV
VQVGGEVTIGCKPNASPRAVINWRKGSEVLRQNKRVILLEDGSLRLYNVTKSDAGVYTCI
ATNQFGVARNSGNLIVKERTVITIPPSNMDVTVGESIVLPCQVSHDPSVDVVFTWSFNGK
RIDFNRGIHHLERIGRESVGDLMIRNIQLHHSGKYVCMVQTSLDSRSATVDIIVRGPPGP
PEDVKVEHISSTTAVLSWKSGIDNNSPVQIYSIQTRTPFSVGWQAVATVPEVINGRTHKA
TVVDLSPWVDYEFRVVASNSVGIGEPSRPSALLKTKAAVPVVAPTNVSGGGGSRSELVIT
WEPVPEELQNGEGFGYIVMLRPLGSITWTKAVVASVEASKYVYRNESITPLSPFEVKVGV
YNNEGEGTLSSISIVYSGEDEPQIAPAGASALSVSAAEVEVSWQPIAWNRHTGRVLGYEV
LYWTDDPKESTAGKVRVNGNVTAKNITGLKANTVYFATVRAYNTAGTGPSSTPVNVTTKK
SPPSQPPANIAWKLSNSKICLNWEHVKTMENESEVLGYKILYRQNRHSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKISSLSSGAIKMSQRVNHILTSGIPLLS
SVLITLLLDD
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgctatggaaactaataagtctgctgccattcatgagctgcagcacaggggaa
gaaaccctccatggtcctatttttatccaagagccatatgataccacttactccatggac
tctgcaaatccagaaatcctactgaactgtacagctaaaggatatccactcccatactac
aggtggaagcaaaatggcacagatattgatcttaccatgagttatcactacaggttggtt
ggaggcagcttggcaatcaataacccacataaaaaacaggatattggaacataccagtgt
ttggccacaaattcatttggaacaattctgagcaggaaggcaaagcttcaatttgcatat
cttgaaaattttgaaacgaaaacaagaagcacggtgtcagtcagagaaggacaaggagtg
gttctgctctgtgggcctccaccacattatggaggcttgtcctacacgtggatcttcaac
aacaataccttatatgttcaggaagatagtcgccgctttgtttcacaagaaacgggaaat
ctgtacattgccaaagtagagccatcagatgtgggcaattatacctgcgttgtaacgaac
tctgaagcggagcaaagtgtgcgggggccacccacgcctctcaccctccgcagcgatggt
gtgatgggggagtatgaaccaaagattgaagtacgttttccagaaacaacatatgcagcg
aagggctcgtctgttaaactggaatgctttgcccttggaaatcctgtccctagtattagc
tggaagaggtctgatgggaactcattgacaaagaaaatcgaacacaacaaaaccaaaggg
gttcttgaaatcccagatgttcagcaagaagatgaaggctcttatgagtgtgttgcagga
aacagtcgcggaagaaacattgcaagaggtcaattatttgtctatgcactcccggaatgg
gataaaaaaatccaaaatgcctttctgtctctctatgacagcttattttgggaatgtaag
gcaaaaggaaaaccaagcccttcctacagttggttaaaaaatggccagccgctcacatca
gaggaaagaatccaaatagaaaatggaactcttatcatacctatgctgaatatgtcagac
tctggcctctatcagtgtgtggcagaaaacaagtacggtactatttatgccaatgcagag
ttgcgggtgatagctgcagcacctgatttttccaaaaatcctgtgaaacaaatgtctgtt
gttcaagttggaggcgaagttacaattggttgcaaaccgaacgcttctcccagagccgtt
attaactggagaaagggctcagaggttctgcgccagaacaaaagggtcatcttactagag
gatggcagtctcaggctctataacgtcaccaaatcagatgccggggtgtacacttgtata
gcgacaaaccagttcggagttgccagaaattcagggaacctgattgtgaaagaaaggact
gtaattactattccaccatctaatatggatgtaacagttggagaaagcatagtccttcca
tgccaggtgtctcatgacccctccgttgatgtggtgttcacatggtcattcaatggcaag
agaattgattttaatagaggaatacatcatcttgaaagaattggaagagaatctgttggg
gatttgatgataagaaatattcagctacatcattctgggaaatatgtgtgcatggtacaa
acatctttagacagtcgatctgcaacagtagatataattgtaagaggccccccaggtcca
ccagaagacgttaaagttgaacatatttctagcactactgctgtgttgtcctggaagtcc
ggaatagataataacagtccagttcagatctacagtattcagacgaggactcctttctca
gttggatggcaggcagttgcaacagttcctgaagtcattaatggtaggactcataaggcg
acagtggttgacttaagcccttgggttgactatgagtttcgtgtggttgccagcaacagt
gttggaattggggagccaagcagaccgtcagctctactgaaaactaaagcagcagttcct
gtcgtggcaccaacaaacgtcagcggaggaggagggagccgttctgagctggtcatcacg
tgggagccagttccagaagaactacaaaacggggaaggttttggctacatcgtgatgttg
cgtcctcttggctcaataacctggacaaaagcagtggtggcttcagtggaagcaagtaaa
tatgtttataggaacgaaagcattacacctctctctcctttcgaagtgaaagttggtgtc
tacaacaacgaaggagaaggcaccctgagctccatatccattgtctactcaggagaagac
gagccgcagatagcaccagcgggggcttcggcactgagtgtttcggcagcagaggtggag
gtctcctggcagcccatcgcatggaacaggcacacgggcagggtgctgggctacgaggtt
ttatattggactgatgatcccaaggaaagcacagctggtaaagtcagagtcaatgggaat
gtaacagccaaaaatatcacaggactaaaagctaacacagtgtattttgcaacagttcga
gcttacaacactgcagggacggggccctctagcaccccagtaaatgtcaccactaaaaaa
tcaccaccaagtcagccgccggcaaacatcgcctggaaactgtcaaattccaaaatctgc
ttgaactgggaacacgtgaagacaatggagaatgaatcagaggtgctaggctacaaaatt
ttgtacagacaaaacaggcacagcaaaacacacattctggagacaaacaacacttcagct
gagcttctggtaccatttgaagaagattatctgatagaaataagaacagtcagtgacggt
ggggatggcagcagcagtgaggaaattaggattccaaaaatatcaagtttaagctctgga
gcaataaaaatgtcccagagggtaaaccatatattgacatctgggatcccgctattgagt
tctgttcttattacccttctccttgatgattaa
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