Chroicocephalus ridibundus (black-headed gull): 134521612
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Entry
134521612 CDS
T10910
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134521612 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134521612 (MBD4)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134521612 (MBD4)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
134521612 (MBD4)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134521612 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
134521612
NCBI-ProteinID:
XP_063204306
LinkDB
All DBs
Position
10:9143412..9148428
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AA seq
516 aa
AA seq
DB search
MAAPGGGEAAAGMAAAEWGQGGGGPGRRAGRSGGCVLSPEGSKRRSKSACVEYFRKTGEM
MLKADFDVPARCQRSTRSRVKRCSTKARTVSENEDCHSQVQGLGMQNGEEDRIQNIQTGN
EHLEDVTPTPESKDLIMKGINPKDCLKTRKKGAGGKGAQNKKTGKSSEKRNRDSTQNKRQ
RRACNKQETEGVQNKKFCGQRDVCVADSRGVADQNADPAGLGRTLLRVSRLRSGTELRSA
AARSQRQLESRAGGKCVETSSDDASSAKSEEKTNGLKVGKEVDQGNSGNRDFKSDTEMDA
NVLQPCDKKSFTAVKMPPEESIPQTQVDRRKTSPYFSSKYSKEGKSILYCPVNFPVLPLC
PAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKK
YPSPEITRTADWKEMSELLRPLGLYELRAKTIIRFSDEYLSKRWKYPIELHGIGKYGNDS
YRIFCVNEWKEVQPQDHKLNVYHAWLWENRERLSID
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgggcggcggggaagcggcggcggggatggcggcggccgagtggggccag
ggcggcggcgggccgggccgcagggcggggaggagtggcgggtgcgtcctcagtcctgaa
ggaagtaagagaagatcgaaaagtgcatgtgtggagtattttcggaaaactggggagatg
atgctaaaagcagattttgatgtcccagctcgttgccagaggagtacccgttcgagggtg
aaaagatgcagtacaaaagcgagaactgtttcagagaacgaggattgtcacagtcaggtg
caaggcctcggtatgcaaaatggtgaagaggacagaattcaaaacattcagactggaaat
gaacacctggaagacgttacacccactccggaaagcaaagatttgatcatgaaaggcata
aacccgaaggactgtttgaaaaccaggaaaaagggggcaggtgggaagggtgctcagaat
aagaaaactggaaagagctcagaaaagaggaatcgagacagtacccaaaacaaaagacag
agaagagcgtgtaacaaacaggaaactgagggcgttcaaaacaagaaattctgtggacag
agagacgtgtgtgtcgctgatagtcggggtgtagctgatcagaatgcagaccctgcgggc
ctgggaagaactctgttaagggtttccaggttgcggtcaggcacagagctgaggtcagcg
gcagctcgctcgcaaaggcagctggagagcagagcaggggggaagtgtgtggagacaagt
tctgatgatgcgtcttctgcaaaatctgaggagaaaaccaatggattgaaagtagggaaa
gaggtggatcaagggaattcaggtaaccgtgattttaaatctgacactgaaatggatgct
aacgtcctgcagccgtgtgacaagaaaagcttcacagcagttaaaatgccaccagaagag
tctatcccacaaacacaagtggataggaggaaaacgagtccatatttttcaagtaaatac
agtaaagaaggtaaatccatcctttactgcccagtaaattttcctgtgttgcctctgtgt
ccagctcccagcccacccagaaggaaggccttcagaaaatggactccaccgcgttctcct
tttaatctggtccaagaaacacttttccatgatccgtggaaacttcttattgcaaccata
tttctcaataaaacttcaggtaaaatggcaattcctgtgctctgggagttccttaagaag
tatccttctcctgaaataaccaggactgcagactggaaagaaatgtcagagctgctcaga
cctcttggcctctacgaactcagagcaaaaacgatcatcaggttctcagatgagtacctg
agcaagcggtggaagtaccccatcgagctgcacggcatcggcaagtacgggaacgactcc
tacaggatcttctgcgtcaacgaatggaaggaggtgcagccgcaggaccacaagttaaac
gtgtaccacgcgtggctctgggagaaccgggagaggctgagcatcgactga
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