Chroicocephalus ridibundus (black-headed gull): 134521785
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Entry
134521785 CDS
T10910
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134521785 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crid03400
]
134521785 (UIMC1)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
134521785 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
134521785
NCBI-ProteinID:
XP_063204775
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Position
11:complement(21706253..21745399)
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AA seq
808 aa
AA seq
DB search
MPRKKKPTEGLESRGQDGEEEEEEKRNPGNGKKKRSFVDAFIVISDSDGEQESKEESGLQ
KKRTKQQLDRTKFAAKRKIAQMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAES
LSSCQPSDSSDATPQLSAEALGARSQSQPAEKEGSEILGGLARCPDTPRSECSSHSQSAR
ADGNGQMDVARSPLVVLRRLSQEIVESSLVSSIIVSPGKGQPVTRSSEEPSSPAKSDSSS
ILPSTLREDFISLSPTFGRVTSSSWQLTPRRLFTTPSSSSEATGHEPKEQSLPCTGHSAG
EASAGSSPTLWKSWTRRSGGGAGTKHTSQPARAAKGCVSTEQAEQNEVPDSTPELCVLNA
VEEKHKQEEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQLLHKKEF
GNPVVPSSSLSQNELGKGEPISRENGVADDTEDGDPDKQKASESVTWLLSSKRREAESPG
HSMEEEKNSTSDDEPTTSYCQAPQVLPAEDVREDGEPMQIAQSISVLTPLGSKRSPDIAT
ENSAEEEISVCPETQLSPLEAIEAEREELRLGSGDAPMQGGGDEGAGRTASESSPAAADR
VSCPLCDRGFPATEIELHAMYCNGIVGEEAAEDSPVLTRRQREARSKAASSDGGPTSLDT
DKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRSAKDVGRQERGLLRMLELSES
KSAGADAGGPIAGLGDQQSPPALSAGAGGAAADSPSCLRHLPFNISPAKPGVSFSQATDG
VVDLEPHAALRLGSQRQTKGCRRRKRKV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagaagaagcccacagagggcctggaatctcgaggtcaggatggggaggaa
gaggaggaagagaagaggaacccaggcaacggcaagaagaagcgcagttttgtggacgcg
tttattgttatatctgacagcgatggagagcaggagtcgaaggaagagagtggattgcaa
aagaagagaacaaaacagcagctggatagaacgaagtttgctgctaaaagaaaaattgca
cagatgactgaagaggaacagtttgcgctggccctgaaaatgagtgagcaagaagccaga
caagtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagc
cttagtagctgtcagccctcggactcctctgatgcaacccctcagctgtctgcagaagcg
ctgggcgcgcgaagccaaagccagcccgctgagaaagaaggctctgagatcctgggaggt
ctggcgcgttgccctgacacccctcgctccgagtgcagctcccactcacagagcgccaga
gctgatgggaatggacagatggatgtcgcccggagccccctggtagtgttgaggaggtta
agccaggaaattgttgaaagctcactagtatccagcataatcgtgtctccggggaagggc
cagcctgtgacaaggtcaagcgaagagccttcctcaccagcaaaaagtgattctagttcc
atcttacccagcactctcagagaggacttcatctctttgagtcccacctttggcagggtg
acttcaagctcctggcaactgacacctcggagactgttcacgaccccttccagctcttct
gaagcaacaggccatgaaccaaaagagcagtccctgccctgcactggccattctgcggga
gaagccagtgccgggagctcacccacgctctggaagagctggaccaggaggagtggtgga
ggagcaggtaccaaacacacctcgcagcctgcgcgtgctgccaaaggctgtgtttccaca
gagcaagcggagcagaacgaggtgcctgacagtacccctgagctttgcgtgctgaacgcg
gtggaggagaagcacaagcaggaggaggcgagagacacagtgcactattactggggcatc
cccttctgccccaaaggggtggaccccaaccagtacaccaaagtcatcttgtgtcagctg
gaggtttaccagaagagcctgaagcaggctcagaggcagctattgcataagaaggagttt
ggtaacccagtggtgcccagttcttccttgagccaaaacgagcttgggaaaggagagccg
ataagcagggagaatggggttgctgatgatacagaagatggagacccagacaagcagaag
gcgtctgagagcgtgacctggctcctctcttcaaagaggagggaggcagagagtccaggg
cacagcatggaagaagagaagaactccacttctgatgatgaaccgactaccagctactgc
caggccccccaggtgctgcccgcagaggacgtgcgtgaagacggggaacccatgcaaatt
gcacagagcatctccgtgttgaccccacttggcagcaaaaggagcccagatattgccaca
gaaaactctgctgaagaagagatctctgtctgcccagagacccagctgagtccgctggaa
gctattgaggcggagagagaagagctccgcttgggcagcggcgacgcgcctatgcagggt
ggtggagatgaaggtgctggcaggactgcgtctgagagcagtcccgcagctgctgaccgt
gtgtcgtgcccgctgtgtgaccgaggctttccagcgacggagatcgagctgcatgccatg
tactgcaacggcatcgtgggagaggaggctgccgaggacagtccagtgctcacccggcgc
cagagagaggcaagaagtaaagctgccagcagtgacggtggcccaacgtccttagacact
gacaagtgtgagaagtgctacctctgtaagtcactggtgccactgctgcagtatcagagg
catgtggacagctgccttcaggctgctaggcaagctcagggaaccaggaggctgcgaagc
gccaaggacgttggaaggcaggagaggggactcctcaggatgctggagctctcggagagc
aagtctgcaggtgctgatgcggggggacccatcgctggactaggagaccaacagtccccc
cctgcgctctcagccggagccgggggggcggcggcagacagccccagctgccttcggcac
cttcctttcaacatctcccctgcgaaacccggcgtctccttctcgcaagccacggacggt
gtggtggacttggagccccacgcggctcttcgcctgggcagccagcggcagaccaaaggc
tgccgacggagaaagcgcaaggtctga
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