Chroicocephalus ridibundus (black-headed gull): 134521840
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Entry
134521840 CDS
T10910
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134521840 (RNF130)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134521840 (RNF130)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134521840 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
SP24
zf-ANAPC11
PspB
zf-RING_16
Prok-RING_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
134521840
NCBI-ProteinID:
XP_063204926
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All DBs
Position
11:complement(17945665..18001445)
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AA seq
425 aa
AA seq
DB search
MSWRWARQHRNGGSSVLLLLLPLLLLWHGRVGADNASQAYYTALINVTVLSPERGGPTLL
RIDRGRYGQDSPKVEVKGLLVAPVPINGVADRLGCDPRTRFQVPPNTKQWIALLQRGNCT
FREKILRAASHNATAVVIYNNISSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNIS
VLMAIAVGSRVPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRL
GDAAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKACVDPW
LSEHCTCPMCKLNILKALGIVPNVPCTDNVAFDMERLSRGQPAGRRSALGDFANDSSLSL
EPLRTSGMSQLPQDGELTPRSGEINIAVTKEWFIIASFGLLSALTLCYMIIKATASLNAN
EAEWY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcggtgggctcgccagcaccggaacggcggctcctccgtcctgctgctgctg
ctgccgctgctgctgctgtggcacggccgggtcggcgccgataacgccagccaggcgtac
tacaccgccctcatcaacgtgacggtgctgagccccgagcggggcggccccacgctgctg
cgcatcgaccgcgggcgctatgggcaggactcccccaaggtggaggtgaaggggctgctg
gtggctcccgtccccatcaacggagttgcagatcgtctgggctgtgaccctcgaacacgt
ttccaagttccaccgaacaccaagcagtggatcgctttgctgcagcgaggaaactgtacc
tttagagagaaaatactgcgagcagcttcacataatgccacagccgtggtcatttacaac
aatatatccagtgaagaacctgtcacgatgactcatcaaggaactggagacattgttgct
gtcatgattacagaatcaaaggttaaggagatcctgaattacttggaaaagaatatctct
gtcctgatggcaatagcagtggggtcccgtgttcctccaaaaaacttcagtcggggctct
ctagtctttgtgtcaatatcattcattgttttgatgataatttcttcagcatggttaata
ttttacttcatccagaagatcaggtacacaagtgcacgtgacaggaatcagcgtcgtctt
ggagatgctgccaagaaagccattggtaaattgacaaccaggacagtaaagaagggtgat
aaggaaacagacccagactttgatcattgtgctgtctgcattgagagttacaagcagaat
gatgttgttcgcattttaccatgcaagcatgttttccacaaagcctgtgtggatccatgg
cttagtgagcactgtacgtgtccaatgtgtaaactgaacattttgaaggcactgggaatt
gtgccaaatgtgccatgtacagataacgtagcctttgacatggaaaggctcagcagaggc
cagccagccggccggcggtcagcacttggcgattttgccaatgacagctctctcagcctg
gagcccctgcgcacctccgggatgtcacagctgccccaggacggagagctaacgccaagg
tcaggagagatcaacattgctgtgacaaaagaatggtttattattgccagttttggcctc
ctcagtgcccttacactctgctacatgatcatcaaagccacagctagcttgaatgctaat
gaagcagaatggtattga
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