Chroicocephalus ridibundus (black-headed gull): 134521861
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Entry
134521861 CDS
T10910
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
134521861 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134521861 (IRF1)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
134521861 (IRF1)
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Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
134521861
NCBI-ProteinID:
XP_063204971
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Position
11:13512355..13519482
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AA seq
387 aa
AA seq
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MGGAAAPRGGADWLGRSRARGGGESRAPPRYTRGRVPRAAEVGRRAAVSDRCAPIGSSHR
GTHGTAQPDTMPVSRMRMRPWLEMQINSNQIPGLIWINKDKMMFQIPWKHAAKHGWDMEK
DACLFRSWAIHTGRYKVGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYR
MLPPLTKDQKKERKSKSSREARNKSKRKSYEDMRTEESAERLTNTPLPDDHSGYTVHDYT
GQEVEVESTSITLDLSSCEVSGSLTDWRPPMEITMADSTNDLYQLQVSPLASSSEVTDED
EEEINSDIFKLLEPAQDWHTTSVGGKGFLTNEPGTQTMGTYSYKEQDREIDTTSGDLEFR
FFDQKSSLDFSWMETMRPSMQVIHCGL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgcggccgccccccgcggcggcgctgattggctgggccgcagtcgggcccgg
ggcggcggggaatcccgggccccgccgcgttatacccgagggcgcgtcccgcgggcggca
gaggtgggacggcgggcggcggtgtcggaccggtgcgctcccatcggctcgtctcaccgc
ggaacgcacggcacggcacagccagacaccatgccggtatcaagaatgcgcatgaggccc
tggttggaaatgcagattaattccaatcaaataccaggactgatatggattaacaaggat
aagatgatgtttcaaatcccatggaaacatgcagctaagcatggctgggacatggagaaa
gacgcctgccttttccgcagctgggccattcatacaggaagatataaagtaggtgagaaa
gaccctgatccgaaaacctggaaggcgaatttccgctgtgccatgaattccctgcctgac
atcgaagaagtgaaggataaaagcatcaacaaaggctccagtgctgtcagggtttacagg
atgctgccgcccctgacaaaggatcagaagaaagaaaggaagtcaaagtcttcaagagaa
gcaagaaacaagagcaagagaaagtcgtatgaagacatgaggacggaggagtcagcagaa
agactaaccaacactcctctgccagatgaccacagtggctacaccgtgcacgactacacg
gggcaggaagtggaagttgagagcacgtccatcaccttagacctctcctcctgcgaggtg
agcggctccctgaccgactggaggccaccgatggaaatcaccatggctgacagcaccaac
gacctctaccagctccaggtgtctcccctggcttcgtcctcagaagtcacagatgaagat
gaagaggaaattaattcagacatttttaagctgctcgaaccagcccaagactggcacacc
accagcgtgggggggaaaggcttcctcaccaacgagccgggcacgcagaccatgggcact
tacagctacaaggagcaggacagggagatcgacacgacttcaggagacctggagttcagg
ttcttcgaccagaagagcagcctagacttctcctggatggagacaatgagaccttccatg
caagtcattcactgcgggttgtaa
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