Chroicocephalus ridibundus (black-headed gull): 134521942
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Entry
134521942 CDS
T10910
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134521942
Cell adhesion molecules [BR:
crid04515
]
Cadherins
Protocadherins
134521942
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
134521942
NCBI-ProteinID:
XP_063205153
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Position
11:1883533..1893998
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AA seq
813 aa
AA seq
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MAIARQVLCLCAFLSLPLARSEPIRYSVAEEAASGSVVANVAEDAGLSPAQLAARGARLA
SEDGRQHFRLDPATGRLVVAERLDREELCGQSATCTLPFELLLANPLQFFRVEVAVEDIN
DHAPIFPEERVTIKILERSDLGSRFPLEGARDLDVGSNSIQAYSISPENEYFSVSFASQS
EEDKYVELVLEKALDREEEGEVVFSLIAMDGGSPPRSGTTQIRIVILDVNDNSPVFTQKL
YVGQVLENAPVGSVVLRVVATDQDVGVNGDITYQFRQAVGQSNSAFMIDPTSGEIKLTKP
LDFEVAENHELSVRAVDGGGLSAICKVLVEVVDVNDNAPELVVNSFNSPLPENALPGTVV
ALFTVRDRDSGANGKISCALEDQLLFSLRLAYKNYYELVTVSMLDREEMARHILIVTAAD
AGSPPLTTTQTFTVDISDVNDNAPAFNQTSYTMYVRENNVPMVLVGAVSAADADVGPNAK
VSYFLAPSHPTEQPPCSCISVNSENGHVFVLRPLDYEQVKQIDVLVSACDAGSPPLSANV
TVHLVVVDENDNVPLVLYPSQDSGPPSSELVPVSAEEGYLITKVVAVDADSGQNSWLSYH
LLKATEPGLFVVGAQSGEVRLKRPVTERDVVKQKLVVVVRDNGQPPLSATAALNALLLND
FSDVHLPHSSLATEDESGSLTTYLIISLTIVSLLFLASMTAFIARKVCKRKELKAGHVLY
GAGNLQSSLADAATAGTLPHGYCYEISLTTGSGNSEFKFLKPILPSLPPQQCTTVGDTHD
EQVFPRGPITAADMAPENPGTLSAEQFSSLSFN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctgtgctttcctctccctgccgctcgctcgc
tccgagcccatccgctactccgtagccgaggaggcggcgagcggctccgtggtagccaac
gtggcggaggacgcggggctgtccccggcgcagctggcggctcgcggcgcccgcctggcc
tcggaggacggccggcagcactttcgcttagaccccgccaccggcaggctcgtcgtggcc
gagaggctggaccgggaggagctgtgcggccagtccgctacgtgcacgctccccttcgag
ctcctgctggcaaacccgctgcagttctttcgggtggaggtggccgtggaggacatcaat
gaccatgcccccattttcccggaggaacgagttactattaagatcctggaaaggagcgac
ctgggctcgcgtttccctctggagggtgctcgggacctggatgttggcagcaacagcatc
caggcttacagcatttctcccgagaacgagtacttcagtgtctcctttgcaagtcagagt
gaggaggacaaatacgttgaactggtcttggagaaggctctagacagagaggaggaagga
gaggtggttttcagtctcattgccatggatgggggctctcctcccaggagtgggaccaca
caaatccgcattgttattctagatgtaaatgacaactctcctgtcttcacacagaagctg
tatgttgggcaggttttggaaaatgcccctgtgggctctgttgttctcagagtggtggca
actgatcaggatgtgggagttaatggggacatcacctatcagttcaggcaagcagtggga
caaagcaactcagcattcatgatcgaccctactagtggtgaaattaaactcacgaagcct
ctggactttgaggtggcagagaatcatgagctcagtgtgcgggccgtggatggcggtggc
ctgtcagctatctgcaaggttttggtggaggtggtggacgtgaacgacaacgcacctgag
ctggtggtcaactccttcaacagccccctccccgagaacgcattgcctggaacagtggtt
gccctctttactgtcagggaccgggattctggtgcaaatgggaagatctcctgtgccctt
gaggatcagctattgttctccctgcgtctggcctataagaattactatgaactggtgact
gtgagtatgctggacagggaggagatggcacggcacatcctcattgtcacagcagcagat
gcagggtcacctcctctcacaaccacccagaccttcacggtggacatctccgatgtcaac
gacaatgcacctgccttcaaccagacatcatacacgatgtatgtgcgcgagaacaatgtc
cccatggtgcttgttggagctgtcagtgctgcagatgctgatgtggggcccaatgccaag
gtgtcatatttcctggcaccgtcccatcccacagagcagcctccctgctcctgcatctcc
gtgaactctgagaatgggcacgtgtttgtgctgcggcctttggactatgagcaggtgaag
cagattgatgtcttggtgagtgcctgtgatgcgggatctcctcctctcagtgccaacgtc
accgtccaccttgttgtggtggatgagaatgacaatgtgccactggtgctgtacccatca
caggacagcggtccaccatccagcgagctggtgcctgtatcagctgaggaggggtacctc
atcaccaaagtggtggctgtggatgcagactcgggacagaactcgtggctctcataccac
ctgctgaaggccaccgagcccgggctgtttgtggtgggtgcccaaagcggagaggtgcgg
ctgaagaggccagtgacagagagggacgttgtgaagcagaagctcgttgttgtggtgcga
gacaatgggcagccaccgctgtcagccactgcggcactgaacgcactcctgctcaatgac
ttctcagacgtgcacctacctcacagcagcctggccacggaggatgagagtggctccttg
acaacctatttaatcatttccttgaccattgtctcactcctcttcctcgcatccatgaca
gccttcatcgctcgcaaggtgtgcaagagaaaggagctgaaggcagggcacgtgctttat
ggtgctggcaacttgcagagcagcctggctgatgcagccacagcagggaccttgccccat
ggctattgctatgagatcagcctcacaacgggctctggcaacagcgagttcaagttcctg
aagcccatcctccccagcctgccaccacagcagtgcaccacggttggggacacccatgat
gaacaggttttcccccgtggccccattactgcagcagacatggcaccagagaaccccggg
accctctcagcagaacagttcagtagtctttcctttaactag
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