Chroicocephalus ridibundus (black-headed gull): 134522050
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Entry
134522050 CDS
T10910
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04530
Tight junction
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Gene cluster
GFIT
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NCBI-GeneID:
134522050
NCBI-ProteinID:
XP_063205373
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Position
11:18396001..18410392
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AA seq
1045 aa
AA seq
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MLKATLQQRCLQTQPHCPAPGRALQNPCVCGTAQGDAEGDNGCWQERGSRGGQRCHPQDA
PASKTEEEGQRGLLGGKASGSCRQEPGGLNRDALVATLDGSSLASAAEPAAPPKCPSSAP
ELPPAAASPTSDPSQEWKVVKIQRVLIDPAGEPRKAGLSRSASLSEKELKEAKARSRRIA
AQLTTAPGPSSKGVLLFNRRKQRVDGLTGAGHGGGLPLSPAPQPRQAAMEEGEGQGTKPE
SGTLGEELRANASPCREPPAEAQQVPLSVYLKENMASAATNGVQEQAAGGMESGAGGLGD
AGAPAGPSTVALALPQSPEEGKNGEVPGEVPCAPVGTATGTTPLASQQQNGARGRQYYEV
HLTLAKPKPVQNRTARPFGTQASPTSSQPTEGPPATELPPPPTYAETLSSPPPLTRVRSP
PAYSALYPPREQKMLPGPPLGCGVSGPNPLPKTGILEESAARRAGKKSMFTFVEKPKLGP
NPDLLDLVQSADSRKKQKEQGEPGAEDEPFALGAEAANFVPNSTARGGQHLPPADDAPAW
SSCLKSPTIQPKPKPQPSHNLSEARGKGAELFARRQSRMEKFIIEAPSQPELLRSPSPTM
SLPPSWKYDANACLSPMVSRRPSKSPSRPSKTPPASLYGGNLVENEVSQKEIEISKHQPY
QLQSSLFILSPSKGPGKSMPREMPPPRPSLPDAYPYPQQTSCPTSPLPPSPVWHPTAVPS
ASQTTSSPFPGATGALPLTHSSRAGPGAPTEALLASPCRLLPPRAKGGFQAPRPSYSTRN
AGIEPQERRPSLPASPTWTPRLVRRPGSLDGWASPASVPELDEGPPMSPPWSERSLSPLR
QDADPRASRQMQARLARNIINAARRKSSSPKAVGLEGSRPFTPIPAGPPSLPQSPRPVRS
EGSRALAPQAASSVLGSLGSPSPTHKSPLRSPRADGPQFCASPGMSRAAWAEGRRLLLPP
GASSCPIPGLSPSPRSPLPSPVVGGRSPAKRCTSRSPTDSDVSLDSEDSGAKSPGIHSFN
LCPRGWTGSLRLKPGGLPSGAPCTS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggcaacactgcagcagcgctgcctgcaaacccagccccactgccccgcgccc
ggccgggctctgcaaaacccctgtgtctgcgggacggcccagggggacgccgagggggac
aacggctgctggcaggagagggggagcagaggggggcagaggtgtcacccccaggatgct
cctgcctccaagacagaagaggagggacagaggggactgctgggagggaaggcaagcggg
agctgtcggcaggagcccggggggctcaacagggatgctctggttgccacattggatggc
agtagcctggcctcggcggctgagcccgcagcgcccccaaaatgccccagctctgcccca
gagctgccccccgcagcagccagccccacatccgaccccagccaggagtggaaagtggtg
aagatccaacgggtcctcatcgaccctgccggcgagccgaggaaagcgggtctctcccgc
agcgccagcctctccgagaaggagctgaaggaggcgaaggcgcggagccggaggatcgcg
gcgcagctcaccacggcgcctggccccagctccaagggcgtcctgctcttcaaccgccgc
aagcagcgcgtcgacgggctcactggggccgggcatggcggggggctgccgctgagccct
gcaccccagcctcggcaagcagccatggaggagggcgaggggcaggggacgaagccggag
tccggcactctgggagaggagctgcgggcaaacgcctccccgtgccgggaaccacctgct
gaggcccagcaggtcccgctgagcgtctacctgaaggagaacatggcatcggccgccacc
aacggcgtgcaggagcaggctgccggcgggatggagagcggggcgggggggctcggggat
gcgggagcccctgcggggccgagcacggtggctctcgctctgccgcagagccccgaggag
gggaagaacggcgaggtgcccggcgaggtgccctgtgcgccagtgggcacggccacgggg
acgacacccctggccagccagcagcagaacggggcgcggggccggcagtactatgaggtc
catctcaccctggccaagcccaagccggtgcagaaccggacggccagacccttcggcacc
caggcatcccccaccagcagccagcccacggagggacccccagccaccgagctgccccca
ccacccacctacgcggagaccctgagcagccccccgccgctcacccgtgtccgctcgccc
cccgcctactcggccctgtacccgccccgggagcagaagatgctgccgggtccccccctg
ggttgcggggtgagcggaccgaaccccctgcccaaaacagggatcctggaggagtcggcc
gcccggagagccggcaaaaagtccatgttcaccttcgtcgagaaaccgaagctgggcccc
aaccccgatctgctggacctggtgcagagcgcggacagcaggaagaagcagaaggagcag
ggggagcccggtgccgaggatgagcccttcgcccttggggctgaagccgccaactttgtc
cccaacagcacagccaggggcgggcagcacctcccgccggccgacgatgctccggcgtgg
tcctcctgcctcaagtcccccaccatccagcccaagccgaagccacagcccagccacaac
ctcagcgaagcgagagggaagggggccgagctctttgcccgccggcagtccaggatggag
aagttcatcatcgaggctccctcccagcccgagctgctgcggtccccatcacccaccatg
tccctgcctccctcctggaagtacgatgccaatgcttgcctgtcacccatggtctccaga
cgcccttccaagagtccctccaggccctccaaaacccccccggcatctctgtatggcggc
aacctggtagagaatgaggtctcccagaaggagatagagatctccaagcaccagccctac
cagctccagtcttcgctcttcatcctctccccatccaaggggccagggaagtccatgccc
cgggagatgcctccacccagaccctcccttcctgatgcctacccctacccccagcaaacc
tcctgcccgacctctccgttgcctccttccccagtatggcatcccaccgccgtgcccagc
gccagccagaccacctccagccccttccctggtgccaccggggctctgcccctgactcac
agcagccgtgccggtcccggagccccgaccgaggcgctgctggcctccccgtgccgcctg
ctgccgccccgagcgaaggggggcttccaggcaccccggccctcctactccaccaggaac
gccggcatcgagccgcaggaaaggcggccgtccctccccgcctcacccacctggaccccc
cggctggtgcggcgcccgggcagcctggacggctgggccagcccggcctcggtgcccgag
ctggatgagggaccccccatgtcccctccgtggagcgagaggtccctgtcgccgctgcgg
caggacgccgacccacgggccagccggcagatgcaagcgcggctcgccaggaacatcatc
aacgctgctcggagaaagagctcctctcccaaagccgtggggctggagggctcccggccc
ttcacccccatccccgccggcccccccagcctgccccagtccccccggccggtgcggtcg
gagggatccagagccctggcaccgcaggctgccagcagcgtgctggggagcctgggcagc
ccctcgcccacccacaaaagccccctgcgatcgccccgggcagacggtccccagttttgt
gcctcccccgggatgtcccgagccgcctgggcagagggtcgccggctgctgctgccaccc
ggcgcgtcctcctgccccatccccgggctgtcccccagccccaggagccccctgccatcc
cccgtggtgggcgggcggtccccagccaagcgctgcacctcccggtccccgacagactcg
gacgtctccctcgactccgaagactcgggggccaagagcccgggcatccacagcttcaac
ctctgcccccggggctggaccggcagcctgcggttgaaaccgggggggctgccctcgggg
gccccctgcacctcctaa
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