Chroicocephalus ridibundus (black-headed gull): 134522146
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Entry
134522146 CDS
T10910
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134522146 (SOX30)
Transcription factors [BR:
crid03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134522146 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
134522146
NCBI-ProteinID:
XP_063205530
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Position
11:complement(20576351..20584890)
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AA seq
661 aa
AA seq
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MERGARAAPLRSGAPRETPPGLRRPPPPPTPQGEAEVPLRVVRVKMEKPEPGEGNVPRCR
GDSRESGGDFRRFPAPWWGKEESHVTIEKEGEQEGGGRESPKEVKVPEKRGNGKEPWRGA
DVKAEPPDEAFEACRVKEEKGVAPVGSLCGPAHASPGDHKTQQNGGLGILPEDLKIPVVF
HPLPPGTRIQIQGPLPSELIHVTKVPVKQVPLKMQSLLEPSVKIETKNVPLTVLPSDSGM
PDTPFSKDKNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWSKLTEEQKQ
PYYDEAQKIKQRHREEFPGWVYQPRPGKRKRFPLPVSAVYSGTSQSIITTSPAGICPFQS
PAYSVVIPNVKNSIGHPVCEAPSAIRLPASSIQHAGPVTLFQTTSARTPSVAVPAPTLPL
RPIISPQHFAEPAQAEALDGLNCPLKRRTPVFIESRNPSNITTTNSRFSVSTSEPPKEYP
GVSIFPRGVPLPQATPFLHSRLYESPPIGQPASLFGVPPRFPFYHPYFVPGPHYFPSSTC
PFSRPPFGCGNFSSSVSQCLGCYEDRYQRQEVMFSALDGNYPFKEYSEEHIREDHRSCES
LEVVSCYSSCNEERYLSPLPQLDVGELEEVLSATPSTPSSIHLINVIDSDEEDEVKLLRE
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcgccagggcggcaccgctccgctccggggctccccgggagaccccaccg
ggcctccgccgccccccgccgccgcccaccccgcagggggaggccgaggtgcccctcagg
gtggtgcgcgtcaaaatggagaaacccgagccgggggagggaaacgtccccagatgccgc
ggggacagcagagagtcggggggtgatttcaggcgcttcccagctccatggtgggggaaa
gaagagtcccacgtcaccatcgagaaagaaggggagcaggaagggggtggcagagaaagc
cccaaggaggtgaaggtgccggagaagagggggaacgggaaggagccctggagaggagct
gatgtcaaagcggagccgcctgatgaggcctttgaggcctgcagggtgaaggaggaaaag
ggtgttgcccctgtgggctccctgtgtgggcctgctcatgccagcccaggtgaccacaag
acgcagcagaatggggggcttgggatccttcctgaagatctgaagatcccagttgtgttt
caccccttacctcctgggacccgcatacagatccaaggccctctgccgtcagagctgatc
catgtgactaaagtgccagtgaaacaagtgccgcttaaaatgcagtctttactggagcct
tcagtaaagattgaaactaaaaatgttcccctcacagtactgccctccgattcaggtatg
ccagatactccatttagcaaggacaaaaatggccatgtaaagcgtccaatgaacgcattt
atggtgtgggctaggattcatcggcccgccctagcgaaagctaacccagctgccaataat
gcagaaatcagtgttcagcttggactggagtggagcaaactgaccgaagagcagaaacag
ccctattatgatgaagcccagaaaataaaacaaaggcacagagaggaatttcctggttgg
gtttatcaaccacgaccaggcaaaaggaagcgtttcccactgcctgtctctgctgtatat
tccggcacttctcagagtatcatcactacaagtccagctggcatttgtcccttccagtca
cctgcttactctgttgtcatccccaatgttaagaacagtattggacatccagtctgtgaa
gctccttctgccatccgtctgccggcttcttccattcaacatgctggtccagttactctt
ttccagactaccagtgcaagaaccccatcagtggctgttccagctccaaccctgcccttg
cgccctataatttcaccacagcactttgctgaacctgctcaggcagaagctcttgatggg
ctcaattgccctctgaagagacgtacaccagttttcattgagagcagaaatccaagtaac
ataaccaccactaacagcagattttctgtctctactagtgagcccccaaaggagtaccca
ggggtttctatttttcctagaggtgtacctcttccccaagctaccccttttcttcactca
cgtctctatgagtctcctcccattggtcagccagccagtctgtttggagtacctcctcgg
tttccattttaccacccttattttgtacctggacctcactatttcccttcaagcacatgc
ccattcagccgacctccatttggctgcgggaatttctccagctcagtgtctcaatgcctt
ggctgttatgaagacaggtaccaaagacaggaggtgatgttttcagctctggacggaaac
tatcctttcaaggaatactcagaagaacatatacgtgaggaccaccgcagctgtgagagc
cttgaagtagtgtcctgttacagcagctgcaacgaggagcggtatttaagccccctaccg
cagctggacgttggagagttggaggaggttttgtcagccaccccatctactccctccagc
atccacctaatcaacgtaattgacagcgacgaggaagacgaagtaaagttgttgcgagaa
ttgtaa
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