Chroicocephalus ridibundus (black-headed gull): 134522204
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Entry
134522204 CDS
T10910
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
Cell adhesion molecules [BR:
crid04515
]
Cadherins
Protocadherins
134522204
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134522204
NCBI-ProteinID:
XP_063205662
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Position
11:1812298..1821063
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AA seq
1009 aa
AA seq
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MPSHTLAAVLLELQGAAVRLPRLSAGSGQRASGKETGQLPALPVRSESSVGPAGFPALLR
CASHASTVCARARVPVRGGSAGSGRRRAQSRRGPQGGAPGQGGAERLRAGRRPSPTRRYT
AQPSRAEPSRATAASGGERCPVPAAAGPGRPRSVPPSGVGEREAARPPPRRAAAGRRSPR
RSARAIRETEAVRRPEMAIARQVLCLCAFLSLPLARSEPIRYSVAEEAASGSVVANVAED
AGLSPAQLAARGARLASEDGRQHFRLDPATGRLVVAERLDREELCGQSATCTLPFELLLA
NPLQFFRVEVAVEDINDHSPVFPEERVTINILERSDLGSRFPLEGARDLDVGSNSIQAYS
ISPENEYFSVSFGSRRNGDKYVELVLEKALDREEEGDVDLSLIAMDGGSPPRSGTTQIHI
IVLDVNDNAPVFKEEGYIAQILENAPVGSVVLKVTAIDRDEGVNGDITYQFRQAVGQSNS
AFTIDPTSGEIKLTKPLDFEVAENHELSVRAMDGGGLSAICKVLVEVVDVNDNAPELVVN
SFNSPLPENALPGTVVALFTVRDRDSGANGKISCALEDQLLFSLRLAYKNYYELVTVNAL
DREEMARHILIVTAADAGSPPLTTTQTFTVDISDVNDNAPAFNQTSYTMYVRENNVPMVL
VGAVSAADVDVGPNAKVSYFLAPSHPTEQPPCSCISVNSENGHVFVLRPLDYEQVKQIDV
LVSASDAGSPPLSANVTVHLVVVDENDNVPLVLYPSQDSGPPSSELVPVSAEAGYLITKV
VAVDADSGQNSWLSYHLLKATEPGLFVVGAQSGEVRLKRPGTERDAVKQKLVIVVRDNGK
PPLSATAALNALLLNDFSEVRLPHSSLATEDESDSLTTYLIISLTFVSLLFLASMTAFIT
RKVCKRKELKAGHVLYGAGNLQSDLADAATAGTLPHGYCYEISLTTGSGNSEFKFLKPIL
PSLPPQQCTRGGGTDDEQDFPRGPITAEHFAPDNRGTVSAEQFNNLSFT
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccacactctcgccgccgtgttgctggaactgcagggagcggccgtccggctg
ccaagactgtctgccggctctgggcaacgggcatcggggaaagagacggggcagctgccg
gcgctgcccgtgcgctcggagtcaagcgtcggacccgcaggattcccggcgctcctgcgc
tgcgcttcccacgccagcaccgtgtgcgcgcgggcccgtgtgccggtgcgaggcggcagc
gcgggcagcgggcggcggcgggcgcagtcccgccgcgggccgcagggtggtgctcccggc
caaggcggcgccgagcggctgcgggcggggaggcggcccagcccaacccgccgctacaca
gcccagcccagccgagccgagccgagccgggcaacggcggcgagcggcggcgagcggtgc
cccgtgccagcggctgccgggccagggcggccgcgctccgtgccgccatccggagtcggc
gagagggaggccgcccgaccgccgccccgccgcgctgctgccgggcgccgctctccgcgg
aggagtgcgcgggcgatccgcgagacggaggctgtccgccggcccgagatggcgatcgca
aggcaagtgctttgtctctgtgctttcctctccctgccgctcgctcgctccgagcccatc
cgctactccgtagccgaggaggcggcgagcggctccgtggtagccaacgtggcggaggac
gcggggctgtccccggcgcagctggcggctcgcggcgcccgcctggcctcggaggacggc
cggcagcactttcgcttagaccccgccaccggcaggctcgtcgtggccgagaggctggac
cgggaggagctgtgcggccagtccgctacgtgcacgctccccttcgagctcctgctggca
aacccgctgcagttctttcgggtggaggtggccgtggaggacatcaatgaccattccccc
gtgttcccggaggaacgagttactattaatatcctggaaaggagcgacctgggctcgcgt
ttccctctggagggtgctcgggacctggatgttggcagcaacagcatccaggcttacagc
atttctcccgagaacgagtactttagtgtctcctttggtagtcggaggaacggtgacaaa
tatgttgaactggtcttggagaaggctctagacagagaggaggaaggagacgtggattta
agtctcattgccatggacggaggctctcctcccaggagtgggaccacacaaatccacatt
attgttctagatgtaaatgacaatgctcctgtcttcaaagaggaaggatatattgcgcag
attttggaaaatgcgcctgttggctcagtggtccttaaagtgacggctattgatcgggat
gagggagttaatggggacatcacctatcagttcaggcaagcagtgggacagagcaactca
gcattcacaattgatcctaccagtggtgaaattaaactcacaaagcctctggactttgag
gtggcagagaatcatgagctcagtgtgcgggccatggatggcggtggcctgtcagctatc
tgcaaggtgttggtggaggtggtggacgtgaatgacaatgcacctgagctggtggtgaat
tccttcaacagccccctccccgagaacgcattgcctggaacagtggttgccctctttact
gtcagggaccgggattctggtgcgaatgggaagatctcctgtgcccttgaggatcagcta
ttgttctccctgcgtctggcctataagaactactatgagcttgtcaccgtcaatgctctg
gacagggaggagatggcacggcacatcctcattgtcacagcagcagacgcagggtcacct
cctctcacaaccacccagaccttcacggtggacatctccgatgtcaacgacaatgcacct
gccttcaaccagacatcatacacgatgtatgtgcgtgagaacaatgtcccaatggtgctt
gttggagctgtcagtgctgcagatgttgatgtggggcccaatgccaaggtgtcatatttc
ctggcaccatcccatcccacagagcagcctccctgctcctgcatctccgtgaactctgag
aatgggcacgtgtttgtgctgcggcctctggactatgagcaggtgaagcagattgatgtg
ctggtgagtgcctccgatgccggatctcctcctctcagtgccaacgtcaccgtccacctt
gttgtggtagatgagaatgacaatgtgccactggtgctgtacccatcacaggacagcggt
ccaccatccagcgagctggtgcctgtatcagctgaggcggggtacctcatcaccaaagtg
gtggctgtggatgcagactcgggacagaactcgtggctctcttaccacctgctgaaggcc
accgagcccgggctgtttgtggttggtgcccaaagcggggaggtgcggctgaagaggcca
gggacagagagggacgctgtgaagcagaagctggttattgtggtgcgagacaatgggaag
ccaccattgtcagccactgctgcactgaacgccctcctgctcaatgacttctcagaagtg
cgcctaccgcacagcagcctggccacggaggacgagagtgactccctgacaacctattta
atcatttccttgacctttgtctcactcctcttcctcgcatccatgacagccttcatcact
cgcaaggtgtgcaagagaaaggagctgaaggcagggcacgtgctttatggtgctggcaac
ttgcagagcgacctggctgatgcggccacagcggggaccttgccccacggctattgctat
gagatcagcctcacaacgggctctggcaatagcgagttcaagttcctgaagcccatcctc
cccagcctgccaccacagcagtgcaccagaggtgggggcaccgatgacgagcaagatttc
ccccgtggccccattactgcagaacactttgcaccagacaatcgtgggaccgtctctgca
gaacagttcaataatctttcctttacctag
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