Chroicocephalus ridibundus (black-headed gull): 134522205
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Entry
134522205 CDS
T10910
Name
(RefSeq) protocadherin beta-15-like isoform X1
KO
K16494
protocadherin beta
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134522205
Cell adhesion molecules [BR:
crid04515
]
Cadherins
Protocadherins
134522205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
134522205
NCBI-ProteinID:
XP_063205663
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Position
11:1804228..1808968
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AA seq
852 aa
AA seq
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MLGTTEDAGWLFWRVMACGRQSRGSKRQVILFILCACVCQSGAETLRYSLAEEMERDSFV
ANIANDLGVSPSQLAARKARVVSEGSEQLFRLNQNTGILTAKESLDREEICPQSDTCTLF
FKIFFENPLQLIRGEVEVRDVNDNSPEFPEKEMVLEILETAPPGSRFPLEGAQDKDVGSN
GLQNYSLGSNSHFSLALGTGKDGVKYVELVLERQLDREEQRELNLLLTATDGGSPPRSGT
AHVRVVVLDANDNIPVFGREVYEVRLAESSPPEQLVVRVVAVDPDEGSNGKVRYAFTQTS
ERSRQLFELNPVTGEIRLAGNLDFEEAKNHKMVVRGTDGGGLSSHCKVQVEVLDVNDNAP
EIALTSLTASIPEDAPPRTVVALFSVRDRDSGDNGRTECTIDGNLPFSLSRTFDNYYELR
TNAALDRERTAEYNITITAMDWGTTRLSSQESIFVQISDVNDNPPEFTQEIYTMSVTENN
SPMLQIGSVNAIDADAGKNARVRYALVRQESKEQHNVSVNSENGEVYILRPLDYEEVRAF
EVMVRAADSGSPPLSAQAVLRVVVRDENDNAPVLLHPPPDSSATAGELVPRWAREGYLVA
KVVAVDADEGQNAWLSYELAKATEPGLFRVGLHSGEVRTARAVAERDTPRQRLVVLVRDH
GQPPRSSTATLGVALVDGFSDAHLRVIEEAPAAEPDGLLTLYLIVCLACVSALFLATAVA
TVVVRVRRARKREAETLPTFPKAATESNAGSLPRSYVYDVCFAAGTVNSEFRFLRPLFPC
FPSRLPPGPGEQRSSVCSQEVANLGEEGDWAAQGRAPLSEEPGPRPVEAACTANRGMELN
INSDQNPWLTHQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaaccacggaggacgctggctggcttttttggagagtaatggcgtgtgggaga
cagagcagaggcagcaagaggcaagtgatcttgtttattctatgcgcttgcgtgtgtcag
agcggggccgaaaccctccgctattctctggcggaggaaatggagagggactcctttgtc
gccaatattgcaaacgacctgggggtttctccgagccagctcgcagctcgcaaggcccgt
gttgtgtccgaggggagcgagcagcttttccgccttaatcaaaacactggaatcctgacg
gcaaaggagtcgctggaccgagaggagatctgtccgcagagcgatacgtgtaccctcttc
tttaagatattctttgaaaatcccttgcagctgatccgaggggaggtggaggttcgtgac
gtgaacgacaactcccccgagttcccggagaaggagatggttttagagattctggaaacg
gcaccacccgggtcccgcttccctctggaaggcgcccaggacaaggacgtgggcagcaat
ggcttgcagaactacagcctcgggtccaattcgcatttctctctcgctctcggaacaggg
aaagacggagtaaaatacgtggagctcgtcctagagcggcagctggaccgcgaagagcag
cgagagctcaatttactcctcaccgccaccgacgggggctcgccacccaggtcgggcaca
gctcacgtccgggtcgtggtgctggatgctaatgacaacatcccggtcttcggtagggag
gtctacgaggtgcgcctggccgagagcagccccccggagcagctggtagtcagagtcgtg
gccgtggatcctgacgaagggtccaatgggaaagtgcggtatgctttcacccagacatcg
gagcggtcccggcagctcttcgagctgaaccctgtcactggggagatacggctggcgggc
aatctggactttgaggaagcgaagaaccacaagatggtagtgagaggcacagacggtggg
gggctgtcttcgcattgcaaagtgcaggtggaggtcctggacgtgaatgacaacgccccg
gagatagcgctcacctccctcaccgcctccattcccgaagatgccccgccccggactgtg
gtggccctgttcagtgtgcgggaccgggactccggggacaacggcaggacggagtgcaca
atcgatgggaacttgcccttcagtctcagtcgcactttcgataattactatgagctgagg
acaaacgcggcgctggacagggagaggacggcagagtataacatcaccatcacagccatg
gactggggcacgacgcggctgagctctcaggaaagcatcttcgtgcagatatcagacgtg
aacgacaatcccccggagttcacgcaggagatttacaccatgtcggtcacggagaacaac
agccccatgctccagatcggcagcgtgaacgccatagatgccgacgcgggaaaaaacgcc
cgcgtgagatacgcgctggtgcgccaggagagcaaggagcagcacaacgtgtcggtcaat
tctgaaaatggggaggtttatatcctccgcccgctggactacgaggaggtgcgcgctttc
gaggtgatggtgcgcgccgccgacagcgggtcgccgccgctcagcgctcaggccgtgctg
cgcgtggtggtgcgggacgagaacgacaacgcacccgtcctgctgcacccgccccccgac
agcagcgcgacggcgggcgagctggtgccgcgctgggcacgggagggctacctggtggcc
aaggtggtggcggtggacgcggacgaggggcagaacgcgtggctgtcgtacgagctggcg
aaggcgacggagccggggctgtttcgcgtggggctgcacagcggcgaggtgcgcacggcg
cgggccgtggcggagagggacacgccccgccagaggctagtcgtgctagtgcgggaccac
gggcagccgccgcgctcctccaccgccaccctcggcgtcgccctggtggatggcttctct
gacgcccatctgcgggtgatcgaggaggcaccggccgccgagcctgatgggctgctgacc
ctgtacctcatcgtctgcctggcctgcgtgtcggcactattcctggccaccgcggtggcc
accgtggtggtgagggtgcggcgggccaggaagagagaggcagagaccttgcccacgttc
ccgaaggctgccacggagagcaacgcggggtccctgccccgcagctatgtgtacgacgtc
tgctttgctgctggcaccgtcaacagcgagtttcggttcctcaggccactcttcccctgc
ttcccctccaggctgccccccggcccgggcgaacagcgaagctcggtgtgctcgcaagag
gtggccaacctcggggaagaaggcgactgggctgcacagggcagagctcccctctctgaa
gagccaggtcccagacctgtggaagcagcttgcactgcaaacagggggatggagctaaac
atcaattctgatcaaaacccttggctcacccatcagtaa
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