Chroicocephalus ridibundus (black-headed gull): 134522230
Help
Entry
134522230 CDS
T10910
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crid01009
]
134522230 (PTPRT)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
134522230 (PTPRT)
Protein phosphatases and associated proteins [BR:
crid01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
134522230 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
TM_ErbB1
PTP_tm
ig
Ig_3
PTP-NADK
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
134522230
NCBI-ProteinID:
XP_063205721
LinkDB
All DBs
Position
12:complement(14221353..14690790)
Genome browser
AA seq
1507 aa
AA seq
DB search
MTGVAAIVFLLQLLPKAEGQVFAGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMD
PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKV
NGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLA
HPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHR
RFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLW
IKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPG
EGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVQY
QYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPG
PVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLR
NETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTT
ITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAA
ELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKA
VIGRQQATTRNPPSLLSTGASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLT
IKRRRNAYSYSYYLHSSQCFRGLSVFYRTRKLAKKQKETQTSTQREMGPVATSDKTSTKL
SAVHNEEAFSSSCQDVNGFTSPSPCSFSVQSKTLQSKSLLNSYYSVSSDTVPSTTLLDSS
HGEMTQPTLTIQTHPYRSCEPVEMSYPRGQFQPAIRVADLLQHITQMKRGQGYGFKEEYE
ALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPHSDYINANYIDGYHRP
RHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVT
LIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNP
PEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVRELRSQRVNLVQTEEQYV
FVHDAILEACLCGNTAIPVCEFRSIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDC
SIGLLPRNHDKNRCMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLP
NTIADFWRLVFDYNCSSVVMLNEMDAAQLCMQYWPEKTSCCYGPIQVEFVSADIDEDIIN
RIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGRDGRT
VVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVESLEQYKFVYEVA
LEYLSSF
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgtcgccgcgatcgtctttctcctgcagctcttgcccaaggcggagggacag
gtcttcgcaggtggttgttcgtttgatgagcactacagtaactgtggttatagcgtggcc
ttgggaaccaatggatttacctgggagcagatcaatacctgggaaaagccaacaatggat
cctgctgtcccaactggctccttcatgatggtgaacagctctgggcgggcatctgggcag
aaagctcacttgctgttgcctacgctgaaggaaaatgacacacattgcatcgacttccac
tattacttgtccagcagagaccggtcgagtcctggctctctgaatgtctacgtgaaggtg
aacggaggaccacagggcaatcccatatggaatgtctcaggggttgttacagaaggatgg
gtgaaagcagaacttgccatcagtacattctggccacatttttatcaggtgatatttgaa
tctgtctctttgaaaggacatccagggtacatagctgtggatgaagtccgagttctcgcc
catccatgcagaaaagcacctcatttcctacgacttcagaacgtggaggttaacgtggga
cagaatgcgacgttccagtgcattgccgggggaaagtggtcacagcatgacaaactctgg
ctccagcagtggaatggaagggacacagcattaatggtcactcgagtggtcaaccataga
cgtttttctgctactgtcagtgtagccgacacctctcaacgcagcatcagcaagtaccga
tgtgtcattcgttcagatggtggatctggagtttcgaattacgcagaattaatagtgaaa
gaacccccaactcctatcgcccctccggagctgctggctgtcggagccacgtacctgtgg
atcaaacccaatgccaactccatcattggagatgggcccatcatactgaaagaggtggag
tatcggacgaccactgggaattgggcagaaacgcacattgtagactctcctaattataaa
ctgtggcatttggatcctgatgtggagtatgagatcagagtgctgctcactcgccctgga
gaaggaggcacaggcccccccggaccaccactcaccacgagaacaaaatgtgcagatccc
gtccatgggccgcagaatgtggaagttgttgatattcgctcccggcagctgacgttgcag
tgggagccctttggttatgcggtgacccgctgccacagctacaatctcacagtccagtac
cagtatgtgtttaaccagcaaaaatttgaggcagaggaactcatccaaacttcttcccac
tacaccttgcgaggtcttcggcccttcatgaccatccggctgaggttagccctctccaac
ccggagggcaaaatggaaagtgaggagttggttgtgcagactgaggaagatgttcctgga
cccgttcccttggaatccatccagggaggaccttttgaagagaagatctatgttcagtgg
aagcctccaaatgagacaaatggcatcattacactctatgagattacgtacaaggccgtt
ggatctctggatcccagtgctgacctgtccagccaaagagggaaagtcttcaaactaagg
aatgaaacgcatcacctctttgtaggattatacccagggactacgtattcattcaccatc
aaagccagcacagtcaagggctttgggccacccatcacaacacggattgcaactaagatt
tcagcaccgtcgatgccggaatacgacacggactcccccctgaatgagaccgacaccacc
atcaccgttatgctgaagccggctcagtcccggggagcacctgtcagtgtctatcaactt
gttgtcaaggaggagaagctgcagaaagcacggagagctgcagacatcattgaatgcttc
tctgtcccagtgagctacaagaacgcttccagtcttgactccccacactactttgcagcc
gagctgaaacccatcaacctgcccgtcacacagcctttcacagtgggtgacaacaaaacc
tacaacggctactggaacgctccactttctcccctgaaaagctacagcatttacttccag
gctcttagcaaggcaaatggagaaacaaaaatcaactgtgtccggctggcaacaaaagca
gtaataggtaggcaacaggcgaccacgcgaaacccacccagcctcttgagcacaggagct
tccacccagaattccaatgcagtggaaccagaaaaacaagttgacagcacggtgaaaatg
gccggagttatagctggtcttctgatgtttgttattatcctcttgggggcaatgcttacc
atcaagagaagaagaaatgcctattcctactcctattacttgcattcaagccaatgtttt
aggggcctctctgtcttctacaggaccaggaagctagccaagaagcagaaggagactcag
accagtacgcagagggagatgggtcccgtggctacttccgacaagacctctaccaaactc
agtgctgttcacaatgaagaagctttttcttccagctgccaagatgttaatggattcaca
tcaccctctccttgttcattttctgtccaaagcaaaacccttcagagcaaatctttgttg
aattcctactactcagtatcatcagacactgttccatcgaccacgctgttagacagtagc
catggagagatgacccagccaaccctgactatccagacccacccgtaccggagctgtgag
ccggtggaaatgtcctacccccgggggcagttccagccagccatccgagtggccgatctg
ctgcagcacatcacccagatgaagcgaggacagggctatggatttaaagaggagtatgag
gcactacccgaggggcagacggcatcctgggatacagccaaggaggacgaaaaccgcaat
aagaatagatatggaaacataatctcctatgatcattcaagagtgagattgcagctgctg
gatggggaccctcactctgactacataaacgccaattacatcgacggataccaccggcct
cgccattacatcgcaactcaagggccgatgcaagagacagtgaaggatttctggagaatg
atttggcaagaaaactctgcaagtgttgtcatggtcaccaacttggtggaagtgggcagg
gtaaagtgtgttcgatactggccagatgacacagaggtctatggggatattaaagtcacg
ttaattgagacagaaccattggcagagtatgtcatacgcacatttactgtccaaaagaaa
ggctaccatgagatccgagagattcggcagttccacttcaccagctggccggaccacggg
gttccttgctacgccacgggcctcctgggcttcgttcgtcaagtgaagtttctcaatccc
ccagaagcaggacccatcgtggtgcactgcagtgctggggccgggagaacagggtgcttt
attgccatcgacatcatgcttgacatggcagagaacgaaggcgtggtagatatatttaac
tgtgtgcgagagctgcgatcccaaagggtcaatctggtgcagacggaggagcagtatgta
tttgtccatgatgccattttggaggcatgtctctgtggcaacacggccattccagtttgt
gagttcagatccatatactacaacatcagcagactagatccacagaccaattccagccag
ataaaagatgagtttcagactctcaatattgtgacaccgcgcgttcggccagaagactgc
agcatcggtcttttgccaaggaaccatgacaagaaccgctgcatggatgtgttgcccttg
gaccggtgcctgcctttcctcatctccgtggatggtgaatcaagtaactacatcaatgct
gcactcatggatagccacaagcaacctgctgcctttattgtaacccaacaccctttgccc
aacaccatagcagacttctggaggctggtgtttgattataactgctcctcggtcgtgatg
ctgaatgagatggatgcggcacaactctgcatgcagtactggccagagaaaacgtcctgt
tgttacggcccaattcaagtagagtttgtttcagcagacattgatgaagatatcatcaac
cggatattccggatctgcaacatggccaggcctcaggacgggtatcgcatagttcagcac
ctgcagtacattggctggccggcgtacagggacacccccccttccaaacgctccctcctc
aaggtggtcagaaggttggagaagtggcaggaacagtatgatgggagagacggacgcact
gttgtccactgcctgaatggtgggggacgcagcggcaccttctgtgccatctgcagcgtg
tgtgaaatgattcagcagcaaaacatcattgatgtgttccacatagtgaaaacgttacgg
aataacaaatccaacatggtggagtcgctggaacagtataaatttgtatacgaggttgca
ctggaatacttgagttccttttag
DBGET
integrated database retrieval system
