Chroicocephalus ridibundus (black-headed gull): 134522317
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Entry
134522317 CDS
T10910
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crid03041
]
134522317 (DDX27)
03009 Ribosome biogenesis [BR:
crid03009
]
134522317 (DDX27)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134522317 (DDX27)
Spliceosome [BR:
crid03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134522317 (DDX27)
Ribosome biogenesis [BR:
crid03009
]
Eukaryotic type
Pre-60S particles
Helicases
134522317 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134522317
NCBI-ProteinID:
XP_063205948
LinkDB
All DBs
Position
12:complement(6311126..6318553)
Genome browser
AA seq
757 aa
AA seq
DB search
MLQGLGLVGTIAEGDAGPEDPESGGSEDEEEPRRAPGPRRRGSAGGDFSASFVFGEAEAG
GEGAWAAALRQLRGKRAATTLDEKIEKVRQKRKFQEREAKQAKAKDGDAETEDKTKKTEC
EDFSRDEEEEDVESQCSLDDETIFTKADTVKVKEQKRSKKGEKEAESFFEDASQYDDNLS
FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER
LIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSG
PDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSHHRQTM
LFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLT
RTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILVA
TDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKDIV
KTAKTPVKARILPQDVILKFREKIENLEKDVYAVLCLEREEREMQQSEAQINRAKKQLEA
GKQETASEGLERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFMQDQQKKVQMTPEE
RSQFEILKSQMYAERLAKRNRRAKRARALPEEEPAAAPAGPKRKKKQSVFDEELTNTSRK
ALKQYRAGPSFEDRKRLGVAQRRKGGNFKSKSRYKRK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagggcctgggcctggtgggcaccatcgcggagggggacgcgggtcccgaggac
cccgagtccgggggctccgaggatgaggaggagccgcgccgggcgccgggccccaggcgg
cggggctcggccggaggggacttcagcgcctctttcgtcttcggcgaggcggaggccggc
ggggaaggcgcctgggcggcggcgctgcgccagctccgcggcaagagagcggccacgacg
cttgatgagaagattgagaaagtgagacagaaaaggaagttccaggaaagagaagctaaa
caagcaaaagcgaaagatggagatgcggagactgaggataagaccaagaagacagagtgt
gaggatttcagtagggatgaagaagaagaagatgtggagtctcagtgttcactggatgat
gaaactatcttcacaaaagcagatacggtgaaagtgaaggaacagaagagatcaaaaaag
ggagaaaaggaagcagagagcttttttgaagatgcctctcaatatgatgataacttgtca
ttccaggacatgaatctttcacgacctttgctaaaggcaatcacggctcttggcttcaag
caaccaaccccaattcagaaggcttgtatcccggtgggtcttctggggaaggatatttgt
gcctgtgctgctactgggacaggtaaaacagctgccttcatcttgcctgtccttgagcgc
ctgatttacaaacctcgtcaggctccaataacacgggtgttggttctagtgccaacacga
gaactgggtattcaggtgcactctgtcacaaaacagctggcgcagttcagcagcgtcaca
acttgccttgctgtaggtggcctggatgtgaagactcaggaagcagctctgcgctctggg
ccagacattcttatcgccactcctgggcgactgatcgatcatctccacaactgcccttct
ttccacctgagcagtgtcgaggtgctgatattggatgaagcagacaggatgctggatgaa
tactttgaggaacagatgaaggaaataatcaggttgtgctcccaccaccgtcagacaatg
cttttctctgccacaatgacagaggaggtgaaagatttggcttctgtttccttgaaaaat
cctgtccgaatttttgtgaacagcaacacagatgttgcccctttcctgcgtcaggaattt
atccggatcagacccaaccgagagggggaccgtgaggccattgtatcagctctactgaca
cgaaccttcccagatcatgtgatgcttttcacccagaccaagaaacaggctcaccgtatg
cacatcctactggggctgatgggtctgcgggttggggagcttcatgggaacctctctcag
gcacagcggctggaagcactcaggcgcttcaaggatgagcagattgatattctggtagct
acagatgtggctgcacgtggacttgatattgaaggtgttaaaacggtaatcaattttacc
atgcccaacaccaccaaacactatgtgcatcgggtgggtcggacagcaagagcaggcagg
gctggtcgttcagtttcacttgtgggggaggaagagcgcaagatgctgaaggatattgtg
aaaactgccaaaacaccagtgaaagccagaattctcccccaagatgtcatactaaaattt
cgggagaagattgagaatctagaaaaagatgtctatgcggttctgtgcttggagcgtgag
gaacgtgagatgcagcagtcagaggcccagatcaatagggcaaagaagcagctggaggca
ggaaaacaagagactgcgagtgagggcttggagcggagctggttccagacccgtgaagag
aggaagaaagaaaaattggctaaagccctgcaggagtttgacctagcattaagaggcaaa
aagaaaaggaagaaatttatgcaggaccaacagaaaaaagtccaaatgacgccagaggag
aggtcacagtttgaaatcttgaaatctcaaatgtatgctgagcggctggcaaaaaggaat
cgccgagcaaaacgagccagagccttgccagaagaggaaccagcagcagcaccagcaggt
cccaagcggaagaaaaaacagtctgtgtttgacgaagagcttaccaacacgagcaggaag
gcgctgaagcagtaccgtgccggcccatcatttgaagaccgaaaacgtttgggtgtggcc
caacgtaggaaaggaggaaacttcaaatccaagtccaggtacaaaagaaagtaa
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