Chroicocephalus ridibundus (black-headed gull): 134522478
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Entry
134522478 CDS
T10910
Symbol
SDC4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04512
ECM-receptor interaction
crid04514
Cell adhesion molecule (CAM) interaction
crid04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134522478 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
134522478 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134522478 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
crid00535
]
134522478 (SDC4)
Proteoglycans [BR:
crid00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
134522478 (SDC4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
134522478
NCBI-ProteinID:
XP_063206248
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All DBs
Position
12:complement(11431503..11457444)
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AA seq
204 aa
AA seq
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MPLPRVPVVLRAAVLVGLLLLQAVAAESVRETETMDARWLDYPASGDLPDDEDIGEFRPH
LTSDELDIDEASGSGDYPDSEDVIYLTTMDTPVISDNYIPGDTERKIEGEKKNTMVDNEI
IPDKALPVGENLSNKISMASTTNSSIFERTEVLTALIAGGAVGLLFAVFLILLLVYRMKK
KDEGSYDLGKKPIYKKAPTNEFYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccccgcgtcccggtggtgctccgcgccgccgtgcttgtcggcctccttctg
ctgcaagccgtcgccgccgagtcggtgagagaaactgagaccatggacgcccgatggctt
gactaccctgcctctggagacttgccagacgatgaagacattggcgaattcagacctcac
ttaacttctgatgagttagatatagatgaggcatctgggtctggagactacccagactct
gaagatgtcatatatctgaccaccatggatactcctgtgatatctgacaactatatccct
ggagatactgaaagaaagatagaaggtgagaagaaaaacacaatggtggacaatgaaatc
attccagacaaagctctacctgtcggagagaacctgtccaacaagatctccatggcaagc
acaaccaacagcagcatctttgaaagaacagaagtccttacagcgctcattgcaggaggg
gcggtgggcctcctctttgctgtcttcctcatcctcctcttagtctatcgcatgaagaaa
aaggacgaaggcagttacgatcttgggaagaaaccgatctacaagaaagcccctacaaac
gagttctatgcttaa
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