Chroicocephalus ridibundus (black-headed gull): 134522613
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Entry
134522613 CDS
T10910
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
crid Chroicocephalus ridibundus (black-headed gull)
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GFIT
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NCBI-GeneID:
134522613
NCBI-ProteinID:
XP_063206480
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Position
12:3666044..3719290
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AA seq
1466 aa
AA seq
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MLIHTCFFFACLPVASHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNSGVASGKNLTSSGTSAEATPPPLNAVLTQPGKDRAEKKRQKGTQPKGSGESTRNQ
PSAETSVTQATPTTTRSSQRTPANPERESLGKEKPTKDSSRRGSQFQCDTSAMTDIVLLV
DGSWSIGRNNFKLIKEFLSNLISPFSIAQDKIRVGLSQYSSDPRTEWDLSAYSTRDQVLE
AMRSLRYKGGNTFTGLALTHVLEQNLKPEAGARLEAEKLVILLTDGKSQDDANLAAQTLK
NLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGRLTRVLCTRIKEKSN
KENAGSTVKDIPVNTGPQLSPTDLKISAVTSKSMHLTWSPPLRPPKKYRIVYNPSKGGIP
KEVVLDGAVSSLQLSNLTSHTEYLVSVFPIYDTVVGDGLRGVTSTLPLSSPRSLRVSELS
HNSMRLSWKAAQGATQYLVLCSAAPDGAEDYTTEVKVAQPEVLLDGLSPSTEYSVAVYAM
YGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEAASPAVKAHRVAYVSSRGSNP
GEVEVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPQALKVTELS
GNSLRLQWEAVAASDVVVYQIKWSTVGGEKPQELSIAGNVATAVLPGLQKNTDYKISIWA
YYKDGARSDTVSVQHRTNSRSPPTNLFIDSETPTSLQVHWTPPDGRIQHYKITYNPVSDA
GAQQTIMASGKSSSVTLQSLLPDRAYKVVVSAIHYTGESETTSTTGRTAPVLSKFPSIRG
FFPAKTEACPTISSTEGSVRGFDMMEAFGLVEKEYASIKGVAMEPFVFSGSRTFTLFRDT
QLTQRTSDVHLFAIPPEHTISILLRLLPETPKEPFAVWQITDEDFQPLLGVNLDPSKKSL
TYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIALYLDCKKIAEKPINTVGS
ISTAGFIMLGKVTRTRGPRSGSASFQLQSLQIVCSSVGAEEDRCCDLPALRDEETCPTLA
PACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEGPSGQQGSPGS
QGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEGTAGPPGPP
GPRGFQGVTGSRGSSGEKGPPGDIGPTGLPGPKGERGEKGEPQSLATIYQLVSQACERMI
QTHVLKFDSFIHEHARKPVPVWEERLKPGEPGPPGPPGPPGSNGERGENGIPGQPGKDGY
PGERGAPGPKGEKGMSGASEEGIQGPRGRTGPPGEVVLGKPGPKGYPGNAGPQGFPGVRG
QPGQSGYPGGCDISGCYGAGRRDFIP
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcacacttgcttcttttttgcctgcctgcctgtggcgagccatgtctgggga
cgcgtgggccaagggtcaggccggctgaaactcactgtgctttcagaagacaggctccaa
atgaaatggaaagagaccgaagggaacatcaatggctacaaagttcgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactcccaaagccacagtgggg
gggctgagccctaccaaagaatacacgctgcaggtctatgtgctcaacggctcccaggaa
gccctgtttgccaaaaggaaatttgtgatagaggagctaaaaaatgcatcccagactaga
aataaccgaagaaactcaggagttgcgtcaggaaagaatctcacctcttcggggacctca
gcagaggccaccccaccacccctgaatgctgtcttgacacagccaggaaaggacagagct
gaaaagaaaaggcagaaagggactcagccaaagggctcaggagaaagcacaagaaatcag
cccagtgcggagaccagtgtgacacaagcaacaccaacaaccacaagatcatcccagcgc
actcctgcaaacccggagcgagagtctctaggaaaagaaaaacccaccaaggattcatcg
aggcgaggttcccagtttcagtgcgacacatctgcaatgactgatattgtcctgcttgtg
gatggatcttggagcatcggacgcaacaatttcaagctcattaaggagttcctgagcaat
ttgatttccccattcagtattgcccaagacaagataagagtagggctgtcccagtacagc
agcgatccccgcacagagtgggacctgagtgcttactctacgagggaccaggtgctggag
gccatgaggagtctgcggtacaagggtggcaacacctttacaggtctggcgctgactcac
gtcctggagcagaatttgaaaccagaggctggtgcccggttggaggctgagaagttggta
atcctcctgactgatggaaaatcccaggatgatgccaacctggctgctcagacgttgaaa
aacctgggcatagagatatttgccattggggtgaagaacgcggacgaggcagagctgaag
caggtggcctcggagccgctggagctcacggtgtacaacgtgttggatttccccctgctg
agctctctggttggcaggctcacccgggtcctgtgcaccaggatcaaagagaagagcaac
aaggaaaatgcaggcagcactgtgaaagatatccctgtgaacacgggtccccagctgagc
ccaactgaccttaaaatatcagcggtgacctctaagagcatgcacttgacctggagtcct
cctctgagaccaccaaagaaatatcggattgtgtataatccatctaagggcggtatcccc
aaagaggtggttttagatggagcagtctcctctttgcagctttccaatttgacctcgcac
acggagtatctggtgtcggtgtttcctatttacgacacagtggttggggatgggctgaga
ggcgtcacctccacattgcctttgtcttcccctcgctccctgcgcgtctctgagctgagc
cacaacagcatgaggctgagctggaaggcggcccagggagccacgcagtacctggtgctc
tgctccgcagcccccgacggagcagaggactatacaacagaggtgaaggtggcccagcct
gaggtcctgctggacgggctgtcgcccagcacggagtactcggtcgccgtgtacgcgatg
tatggagaagatgccagtgatccagccagcatccaggaaaccaccctggccttgagtcct
cctagatacctgagcttctctgagctcagccacgcgtctgtccgagtcagctgggaggct
gcgtctccggccgtgaaagctcaccgcgtcgcctatgtttctagcagagggagcaacccc
ggggaggtagaggttcctggcactgcaacatccactgtcctgagacctttatcctccctc
acccaatactttatcagtgtccgatctacatatgatgaaggggactcatttccaattacc
ggcaatgtcaccaccttaaaggtccccccgccgcaggcgctgaaggttaccgagctctcc
gggaacagcctccgactgcagtgggaagctgtggctgcctctgatgtggttgtctatcag
atcaaatggagcacagttggtggagagaagcctcaggagctctccatcgctggaaatgtg
gcaactgctgtcctgccaggcttgcagaagaacaccgactataaaatatccatctgggcc
tattacaaagatggtgctcgaagtgacacggtttctgttcagcacaggaccaattcccgg
agcccacccaccaacctcttcatcgactccgagacccccaccagcctccaggtccactgg
accccccccgatggccgcatacaacactacaaaatcacctacaaccctgtttctgatgct
ggtgctcagcaaacaatcatggcttctggcaaaagcagcagcgtgaccctgcagtcactg
ctgcctgatcgagcctacaaggtggtcgtttctgccatccactacacgggagagagcgag
accacatccacaacgggacggacggctcctgtgttgtctaaattcccttcaatacgagga
ttctttccagctaaaaccgaagcctgccccaccatcagctccaccgaaggctccgtacga
ggatttgatatgatggaagcttttggcttggtagagaaggaatatgcctccattaaaggc
gtagctatggagccattcgtattcagcggttcccgtaccttcaccctcttcagagacact
cagctcacccagaggaccagcgatgtccacctctttgccatcccgcccgagcacaccatc
agcatcctcctgcgcctcctgcccgagacccccaaggagcccttcgccgtgtggcaaatc
acagacgaggacttccagcccctccttggtgttaaccttgaccccagtaagaaatccttg
acctatttcaatcatgactacaaggctgatttacaggaagtctcctttgaccagcaggaa
gtgaagaagatattctatgggagctttcataaggtgcacgtggccgtgagccacttcaag
attgcgctctatctggactgtaagaaaattgcagagaaacctatcaacaccgtgggcagc
atctccaccgctggcttcatcatgctgggaaaagtgaccaggaccagaggacccaggagc
gggtctgcatcgttccagctgcagtctctgcagatcgtgtgcagcagtgtaggggcagag
gaagacagatgctgtgatctccctgctctgagggacgaggagacctgccctaccttagct
cctgcctgctcttgtacttctggccgcccgggcttgccaggacctccagggccccctggc
agccctgggaggagaggaccgcaaggggagcagggggagccaggacccaagggtgaacca
ggcccaccgggacaagtagggccagagggtcctagtggccaacaaggctctccaggttcc
caaggaatcacggttcagggtcctgtggggccaccaggaattaaaggagagaaaggagac
actgggagtcctggcatgcagggcattcctggtgtgcagggagctccaggcagggatggt
cttcaaggtgcaaagggggtgaggggactagaaggcacagctgggcctccaggacctcct
ggaccaaggggtttccaaggagtgacaggctctcgaggcagcagcggagagaagggacct
ccaggtgacattgggccaacagggctgccgggtccgaaaggagaaagaggagagaaaggg
gaaccacagtccttggccacaatttaccagctcgttagccaggcttgtgagcggatgatt
cagactcatgtgttgaaatttgactcattcattcatgaacacgcgaggaagccagttcct
gtttgggaagaaaggttaaaaccaggagaaccaggaccaccaggtcctccaggtcctcct
gggagcaatggagaaagaggagaaaatggcatccctggacagccaggcaaagatgggtat
cctggagaaagaggtgccccagggcccaaaggagaaaaagggatgtctggagccagtgaa
gaagggatccaaggacccagaggcagaacaggtccaccaggagaagttgtgctggggaag
ccaggtccaaagggttaccctgggaatgctggtcctcaaggttttcccggtgtcagagga
cagcctgggcagtctggatatccaggaggttgtgatatctctggatgttatggagctggt
agaagagatttcatcccctga
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