Chroicocephalus ridibundus (black-headed gull): 134523219
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Entry
134523219 CDS
T10910
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03013
Nucleocytoplasmic transport
crid03015
mRNA surveillance pathway
crid03040
Spliceosome
crid05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134523219 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
134523219 (ALYREF)
03015 mRNA surveillance pathway
134523219 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134523219 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134523219 (ALYREF)
03041 Spliceosome [BR:
crid03041
]
134523219 (ALYREF)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134523219 (ALYREF)
TREX complex
134523219 (ALYREF)
Spliceosome [BR:
crid03041
]
Complex C
Other components
EJC/TREX
134523219 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134523219 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
134523219
NCBI-ProteinID:
XP_063207958
LinkDB
All DBs
Position
14
Genome browser
AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGAGRGGGRGGRGRGGATRGGGPGRGGVGAGRAGGGGPVRN
RPVMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIDTQRRPAQSVNRGGMTRNRGGSGGFGGGGGNRRGTRGGNRGRGRGAGRTSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgatatcattaagctcaaccgcagccagcgc
ggggccggccggggcggcggccggggcggccggggccggggcggcgccacccgcgggggc
gggcccggccggggcggcgtgggagccgggcgggcgggcggcggcggccccgtgcggaac
aggccggtgatggcccggggcggcggcaggaaccggcccgcgccctacagccggccgaag
cagctccccgagaagtggcagcacgacctgttcgacagcggcttcggggcgggggccggc
gtggagaccggcgggaagctcctcgtgtcgaacctggacttcggcgtctcggatgcggac
atacaggagctctttgcagagtttgggaccttgaagaaggcagctgtgcactatgacaga
tctggccgcagcctagggacagcggacgtgcattttgaaaggaaggcagatgctctgaaa
gcgatgaagcagtacaatggcgtccccttggacgggcgccccatgaacatccagctggtc
acatcacagatcgacacacagaggagaccagcacagagtgtaaacagaggtggcatgacc
agaaaccgcggtggttcaggaggatttggtggtggaggaggcaacaggcgaggtactcgt
ggtgggaacagagggagaggcagaggagctgggagaacttccaaacagcaactctccgca
gaagaactagatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
