Chroicocephalus ridibundus (black-headed gull): 134523219
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Entry
134523219 CDS
T10910
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03013
Nucleocytoplasmic transport
crid03015
mRNA surveillance pathway
crid03040
Spliceosome
crid05168
Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134523219 (ALYREF)
TREX complex
134523219 (ALYREF)
Spliceosome [BR:
crid03041
]
Complex C
Other components
EJC/TREX
134523219 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134523219 (ALYREF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
134523219
NCBI-ProteinID:
XP_063207958
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All DBs
Position
14:complement(4770166..4774802)
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AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGAGRGGGRGGRGRGGATRGGGPGRGGVGAGRAGGGGPVRN
RPVMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIDTQRRPAQSVNRGGMTRNRGGSGGFGGGGGNRRGTRGGNRGRGRGAGRTSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgatatcattaagctcaaccgcagccagcgc
ggggccggccggggcggcggccggggcggccggggccggggcggcgccacccgcgggggc
gggcccggccggggcggcgtgggagccgggcgggcgggcggcggcggccccgtgcggaac
aggccggtgatggcccggggcggcggcaggaaccggcccgcgccctacagccggccgaag
cagctccccgagaagtggcagcacgacctgttcgacagcggcttcggggcgggggccggc
gtggagaccggcgggaagctcctcgtgtcgaacctggacttcggcgtctcggatgcggac
atacaggagctctttgcagagtttgggaccttgaagaaggcagctgtgcactatgacaga
tctggccgcagcctagggacagcggacgtgcattttgaaaggaaggcagatgctctgaaa
gcgatgaagcagtacaatggcgtccccttggacgggcgccccatgaacatccagctggtc
acatcacagatcgacacacagaggagaccagcacagagtgtaaacagaggtggcatgacc
agaaaccgcggtggttcaggaggatttggtggtggaggaggcaacaggcgaggtactcgt
ggtgggaacagagggagaggcagaggagctgggagaacttccaaacagcaactctccgca
gaagaactagatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
