Chroicocephalus ridibundus (black-headed gull): 134523421
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Entry
134523421 CDS
T10910
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04020
Calcium signaling pathway
crid04080
Neuroactive ligand-receptor interaction
crid04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134523421 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134523421 (GRIN2C)
04082 Neuroactive ligand signaling
134523421 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134523421 (GRIN2C)
Ion channels [BR:
crid04040
]
Ligand-gated channels
Glutamate (ionotropic)
134523421 (GRIN2C)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
134523421
NCBI-ProteinID:
XP_063208421
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Position
14:complement(7784715..7800419)
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AA seq
1337 aa
AA seq
DB search
MGRAPAHALLLSMVLGCSAAFTDLLLPGPEEPVVNVAVVFGGTSYPLHIRSRLSPQSFLD
MPLEIHPITVIVNNTNPSTLLTQICDILASHKIHGIVFEDNVGTEAVAQILDFISSQTQV
PVISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVLTFEMSQERSSSRTQRLLRQIDAQVLIVYCSRDEAEYLF
TMAEQAGLVGPGYVWIVPSLTVGNMEVPPASFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGWDCWAPARATATNTSFYRHLLNVTWEHRDFSFNEGGYLIRPTM
VVISLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFLQPVADNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSQSGDGLVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPTF
TIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLAL
LQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEH
LVYWKLRHSVPKSHKLDFLLAISRGIYSCFSGVQTLASPGRAPTPDVTASSAQANVLKML
QAAKEMVSTASVGGSLEQATRTIEDWSSHSERLQTTFSLRTPQLVVQNSTGAHRGPPYST
APTERLGRASAPKGAPLGLPLPQPIPVDSRLPGEEKWRGTNEHVPRLLHPLKFRGGCAGD
ETLLGFPHLLVKTTSPGGDIGEQALMGNHIGAPLPPPTSPRDLPPPDIYREHKRPSGRGE
RLQNTPLLPGDGGQRGSGTLPQLPSAAEKRREVGSPFLPPSCPRGAFPKATRTCRAGGEP
ARPEAAVMEREKPSRWANSARVPGERGEKRRTGGVRRCGAARLPARADVPDLFPEAEAGY
GCGPRCPQATSRLAPRSPMVRLPSYREACRQNPRATTTTAPACAPYACMNSYANLPLYLG
HLSRGSPLPREHPGVLAGCGRGPGRWAGGCRDCGRRGETALLRAVGTERRDPLVAHGVTS
PCAGGSWRRVSSLESEV
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcgcacgctctgctactgtcgatggtgctgggctgctcggctgcc
ttcacggacctcctgctgccgggccccgaggaacccgtggtcaacgtggccgtggtgttt
gggggtacgtcctacccgctgcacatccgctcccgcctgagtccccagagcttcttggac
atgcccctggagatccaccccatcacagtcatcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcgacatcctcgccagccacaagatccacggcatcgtcttcgaggac
aacgtcggcacggaggctgtggcccagatccttgacttcatctcctcccagacccaggtc
cctgtcatcagcatcagcggggggtctgctgtagtcctgaccccgaaggagcctggctca
gctttcctgcagttgggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgctg
gaggaatacgactggggctcctttgccgtcatcaccagcctctacccgggctacaacatc
ttcttggacgtcatccgctccttcacggacgccagctactttggctgggagctgcaggag
gtgctcacctttgagatgagccaggagcggagcagctccaggacgcagcggctcctgcgg
cagatcgatgcccaggtcctcatcgtttactgctcgcgggacgaagccgaatacctcttc
accatggcagagcaagccggccttgtggggccgggatacgtctggattgtgcccagcctg
acagtgggcaacatggaggtgccacccgcctccttccccgtcggcctcatcagtgtggtg
acggagagctggaagctgagcctgcggcagaaggtgcgggatggggtggccatcattgcc
atgggggcagccagcttcttccgggcccacggctacctcccggaggtgggatgggactgc
tgggctcccgccagggccactgccaccaacaccagcttctaccggcacctcctcaatgtg
acgtgggagcacagggacttctccttcaatgaaggtggctacctgatcaggcccaccatg
gtggtgatatcgctcaaccagcaccggctctgggagatggtgggcaagtgggagaaaggc
atcatccatatgaaatacccggtgtggccccgctacggctccttcctgcagcccgtggct
gataaccgccacctgacagtggccacactggaggagagacccttcgtcatcgtggagaac
acggaccccagcaccggggtctgcgtgcgcaacaccgtgccctgccgcaagcaaaccaac
tcctcccagagtggcgatggccttgtggatccctacaccaagctgtgctgcaagggcttc
tgcatcgacatcctgaagaagctggccaaggcagtgaagttctcctatgacctctacctg
gtgaccaatggcaaacatggcaagatcgtccgtggggtctggaacggcatgattggtgag
gtgtactacaagcgcgcggacatggccattggctccctcaccatcaatgaggagcgctcc
gagatcgtggacttctccgtgcccttcgtggagacgggcatcagcgtcatggtggccagg
agcaatggcaccgtctccccctccgccttcctggagccctatagcccggccgtctgggtc
atgatgtttgtgatgtgcctcactgtggtggccatcaccgtcttcgtgttcgagtatttc
agccctgttggctacaaccagaacctcaccagcggcaagaggccaggaggtcccaccttc
accatcggcaagtcagtgtggctgctgtgggctctggtcttcaacaactcggtgcccatc
gagaaccccaagggcaccaccagcaagatcatggtgctcatctgggccttcttcgccgtc
atcttcctcgccagctacactgccaacctggccgccttcatgatccaggagcagtacatc
gacaccgtgtcagggctgagtgacaggaagtttcagaagccgcaggagcagtaccccccc
tttcgcttcggcaccgtccccaacggcagcaccgagaggaacatccgcagcaactatccc
gacatgcacacccacatggtcaagtacaaccagcgctccgtggaggatgccctcaccagc
ctcaaaatggggaagctggatgccttcatctacgacgcagcggtgctcaactacatggca
ggcaaagacgagggctgcaagctggtgaccatcggcagcgggaaggtgtttgccaccacg
ggctacggcatcgccctgcagaaggactcgcgttggaagcgagccatcgacctggccctg
ctccagttcctgggagacggtgagacccagaagctggagacagtttggctgtcggggatc
tgccagaatgagaagaatgaagtgatgagcagtaagctggacatcgacaacatggccggg
gttttctacatgctgctggtggccatggggctgagcctgctggtctttgcctgggagcac
ctcgtctactggaagctgcgtcattccgtccccaaatcccacaagcttgacttcctcctg
gccatcagcaggggcatctacagctgcttcagtggggtgcagaccctggcgagccccggg
cgggcgcccacgcccgacgtcaccgccagctcggcccaggccaacgtgctgaagatgctg
caggcggccaaggagatggtgtcgacggccagtgtgggcggctcgctggagcaggccacc
cgcaccatcgaggactggagcagccacagcgagcgcctccagaccaccttctccctgagg
acaccccaactggtggtgcagaacagcaccggcgcccaccggggccccccctacagcacg
gcccccaccgagaggctggggagagccagtgctcccaagggtgctcccctggggctgccg
ctgccgcagcccatccccgtggactcacggctgcccggggaggagaagtggagagggaca
aatgagcatgtcccccgcctcctccaccccctgaagtttcggggtggctgtgcgggggat
gaaaccctcctgggtttcccccacctcctggtgaagaccacctcccctgggggcgatatt
ggggagcaggcactgatggggaaccacatcggggctcccctcccgcctcccacatccccc
agggacctcccgccgccagacatctacagggagcacaagcggccatcgggaaggggggag
cggctgcaaaacacccccctgctcccaggagatgggggacagaggggctcagggacgctg
ccccagctgccctcggcggcggagaagaggcgggaggtgggcagccccttcctgcctcca
tcctgcccccgcggagccttccccaaagccaccaggacttgcagagctgggggcgagccg
gcccggccggaggctgcggtgatggagcgggagaagccgagccggtgggcgaactcggcc
agggtgcccggggagcggggcgagaagcggcgtacggggggggtgcgacgctgcggtgct
gcccgactgcccgcccgcgccgacgtgcccgacctcttccccgaagccgaggctggctac
ggctgtggcccccgttgcccccaggccaccagccgtctggcaccgcgctcacccatggtc
aggctgccgtcctaccgggaggcttgccggcaaaacccccgtgccaccaccaccaccgcg
ccggcgtgcgcgccgtatgcctgcatgaactcctatgccaacctgcccctctacctgggg
cacctctcgcgggggtccccgctgccccgggagcaccccggggtgctggcgggctgtggc
cgggggccggggcgctgggccggcggctgcagagactgcgggaggcgtggggagacggcc
ttgctgcgggcagtggggacggagaggagggacccgctggtggcccatggggtgacgagt
ccctgcgccggcgggtcctggcggcgggtctccagcctggagtcggaggtgtga
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