Chroicocephalus ridibundus (black-headed gull): 134523454
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Entry
134523454 CDS
T10910
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crid01002
]
134523454 (RHBDL3)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
134523454 (RHBDL3)
Peptidases and inhibitors [BR:
crid01002
]
Serine peptidases
Family S54: Rhomboid family
134523454 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_8
EF-hand_11
EF-hand_9
AIF-1
EH
Motif
Other DBs
NCBI-GeneID:
134523454
NCBI-ProteinID:
XP_063208463
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Position
14:564310..632143
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AA seq
411 aa
AA seq
DB search
MLEMALNHLVISLLEYTSTVYCMLMSLLLNLLFLLFPPLCIASQHWKALFDQFDPDNTGY
ISTEKFRSLLQRHGSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQ
GNRRLCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVE
VAFFLYNGVVLDRFVLQVTHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVL
QLLVGVPLEMVHGAARISFVYVAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIV
MNWSGMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVVVGITL
GVIILRNYEQRLQDQTLWWIFLSIYVIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaatggcactaaatcatttggttatttctctgttagaatatacttctacagtt
tactgcatgttaatgtcgttgctcctaaaccttctttttcttctttttcctcccttgtgc
attgcctctcagcactggaaagccctatttgatcagtttgatcctgacaacactggctac
atcagcaccgagaagtttcgctcccttctccagagacacggatcagagctggacccccac
aagctggaggtcctgctggccctggcagacagcaactctgaggggaggatctgctaccag
gacttcgtcaacctgatgagcaacaaaaggtcaaatagttttcggcaagccatccttcag
gggaacaggaggctgtgcagcaaggcgctactggaggaaacggggctgagcctttcacag
aggctgatccggcatgttgcatacgagaccctgccacgagagatagaccgcaagtggtac
tacgacagctatacctgctgccctccaccctggttcatgattaccatcactattgtagag
gttgccttttttctttacaatggagtggtgttagacagatttgtgctgcaagtcacacat
cccttgtacctgaagaatgcattgctttaccatcctcagctccgtgctcaggcttggagg
tacctaacctacatattcatgcatgcagggatagaacaccttggactcaatgttgtcctt
cagctcttggttggggttcccctggaaatggtgcatggagctgcgaggatcagttttgtg
tacgttgctggagttgtggcagggtccctggcagtgtcagtagctgatatgactgcgcct
gtggtgggctcctctggaggcgtgtatgctcttgtctcagctcacttggccaatatagtc
atgaactggtcaggaatgaagtgccaattcaaactactgcgcatggctgttgccttgatc
tgtatgagctttgaattcggaagagctgtgtggctgcgattccacccttctgcttaccca
ccatgcccacaccccagcttcatggctcacctgggaggggtggtggttggaatcaccctt
ggtgtcatcatcctgaggaactatgagcagagactccaagatcagactttatggtggatt
ttcctttctatttatgtcatttttgtcttgtttgccatcttctggaatatttttgcctac
agcctgttggatctaaagctacctccccctccctga
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