Chroicocephalus ridibundus (black-headed gull): 134523643
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Entry
134523643 CDS
T10910
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134523643 (WDR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crid03009
]
134523643 (WDR3)
Ribosome biogenesis [BR:
crid03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134523643 (WDR3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Utp12
DSE1_N
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
CFAP251_N
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_NOL10_N
ASA1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_Vps41
WDR54
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_SPT8
WD40_like
Beta-prop_IP5PC_F
PAC11
Beta-prop_LRRK2
B-prop_COPA_B_2nd
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
134523643
NCBI-ProteinID:
XP_063208833
LinkDB
All DBs
Position
1:131819974..131841157
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AA seq
940 aa
AA seq
DB search
MGLTRQYLRYAPAALFGLVASARGNAALVGLRGERGRCVAVPACEHVFVWDTRKGEKVLI
LKGLKQEVSCLCPSPDGLHLAVGYEDGSIRIFSLLSGEASVTFNGHKAAVTALQYDHLGG
RLVSGSKDTDVIVWDVINESGLYRLRGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDT
QHCFKTLVGHRTEVWGMALISEEKRLITGSADSELRVWDITYIQEVKDPDEPESKKIKGS
SPGGEENTEEDETLELDESPEERLVKCSKVGSIMREGRDRVVTLATDRTGKILACHGTDS
VLEVFSVLSEEEVQKKLEKKMKKAKKKANQNSEEEPERSVELSLQEEIQRVTNIRASSKI
KSFDLILSPKGELKIVLLLQNNIIESYNLNLSAQVPQAARASKITIGGHRSDVRTLAFSS
DNIAILSAAAESVKIWNRSTLQCIRTMDCEYALCSLFVPGDRQVIIGTKTGKLQLYDLAS
GSLMETLDGHDGAVWSIALSPDQRGFVTGGADKCVKFWEFELVKDESSVQKRLSMKHVRI
LQLDEDVLCVRYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVLCMDISYDGTL
IATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDGKIKQWDADKF
EHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLVLEEEREMQREAEYEE
SVAKEEQPVVAGETQGETGLAGRKTIETIKAAERIMEAIELYREEMAKLKEHKAICKAAG
KEVPFPANPILRAYGNITPSAYVLEVFKKVKSSELEESLLVLPFSYVPDLLRLFNEYIHL
GAEVELLCRALLFLLKIHFGQITSNHMLVTVIENLKKTTISRVSEARDVLGFNMAGLQYL
KREIEAKDEVAFFADATDRFEEKKRKRKKKEKEKMVLAVL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcactcggcaatacctgcggtacgcgccggccgcgctcttcgggctggtggcc
agcgcccggggcaacgcggccttggtggggctgcgcggcgagcggggccgctgcgtggcg
gtgccggcctgcgagcacgtcttcgtctgggacacgcggaaaggggagaaggttcttatc
cttaagggtctcaagcaggaggtcagttgcctctgcccttctccggacgggttgcacttg
gctgttggatatgaagatggatcaatccgtatcttcagcctcctaagtggagaagcgagt
gtcactttcaatggacacaaggctgcagttacagccctgcagtatgaccatctgggtggc
cggctggtgtctggctcaaaggatacagatgtcatcgtgtgggatgtcattaatgagagc
ggtctgtaccggctgagaggacacaaggatgctgtcactcaagtccttttcttgaaggag
aagaacctattggtcaccagcggcaaagacacactggtgaagtggtgggatctggacacc
cagcactgcttcaaaactctggttggacaccgtactgaggtttgggggatggctttgata
tccgaagagaagcgcctgatcactgggagtgctgacagtgagctgagggtgtgggatatc
acatacatccaggaggtaaaagaccccgatgaaccagaatccaagaaaatcaaagggtct
tcacctggaggagaagaaaacactgaagaggatgagaccctagagttggatgagtctcct
gaggaacgcctcgtaaagtgcagcaaagttggatccatcatgcgggaaggcagagaccga
gtagttactcttgccacagaccgaacaggcaagattttggcctgccatggaacagattct
gttctggaagtgttctctgtcctttctgaagaggaagtccaaaagaagttggaaaagaaa
atgaagaaagcaaagaaaaaagcaaaccaaaactctgaagaggagcctgaaaggagtgtg
gagctgagcctgcaggaggagattcagcgggtcactaacatcagagcttcttctaaaatc
aagtcatttgacttgattctctctccaaaaggagagctgaagatcgtactgctgctccag
aacaacatcattgagtcgtacaacctgaacctgtcagcacaagtcccacaggctgcccgt
gcatccaagataaccattggaggccaccgcagtgacgtcaggacgttggcttttagctct
gacaacattgccattctctcagcagctgcagagtctgtgaagatttggaacagatcgacc
ttgcagtgcatccggacaatggactgtgagtatgctctctgctcactctttgtcccagga
gatcggcaagtcatcattggcaccaagacagggaagctgcagctgtatgacctggcttct
gggagtctgatggagacacttgatggtcacgatggggcggtgtggtctattgctctttca
ccagaccagcgtggctttgtgacaggaggtgctgataaatgtgtgaagttctgggagttt
gagcttgtgaaggatgagagcagcgttcagaaaaggctctccatgaaacacgtgcgcatc
ttgcagctggatgaagatgttctctgtgtgcggtacagccccaaccagaaactgctggct
gtctccttactggattgtactgtgaagattttctacgttgacacgctcaagtttttcctc
tctctgtatggacacaagctgcccgtgctgtgtatggacatctcctatgatgggactcta
attgcaaccggctctgcggacaggaatgtgaagatttggggcttggattttggggactgt
caccgctctctctttgcccatgatgacagtgtgatgtatctgcagtttgtcgcgaaatcc
catctcttcttcacagctgggaaggatggcaagattaaacagtgggatgcagataaattt
gagcacatccagacgctggaggggcatcaccaggaggtgtggtgtttggcactcagtccc
aatggagactacgtggtgtcagcatcccatgacaagtccctgcgcctctgggaaaggaca
agggagccacttgttttggaagaggagagggagatgcaacgagaagctgaatatgaagag
agtgtggcaaaggaagagcagcctgtggtggctggagagacgcaaggagagacggggctg
gcaggaaggaagactattgaaaccatcaaagcggctgagcggatcatggaagctatcgag
ctgtatagagaagagatggcaaaactaaaggaacacaaggccatatgcaaagctgcagga
aaagaggttccctttcctgccaatcctatcctccgtgcctatggaaatattacaccttct
gcatatgtgctagaagttttcaagaaggtcaagtcaagtgagctggaagagtctctcctg
gtgctgcccttctcttatgtccctgacctgctcagactcttcaatgaatatattcacctg
ggtgcagaagttgaactcctgtgccgagctctcctcttcctgctcaagatacattttggg
cagatcacaagcaaccacatgctggtgacagtgatagaaaatctgaagaaaactactatc
tccagagtcagtgaggctcgggatgtgctgggattcaacatggcagggctccagtatctg
aagagggagatagaggccaaggatgaggtggcattttttgctgatgctacggaccgtttt
gaggagaagaagaggaagaggaaaaagaaagagaaagagaagatggttcttgcagtgctg
tag
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