Chroicocephalus ridibundus (black-headed gull): 134523703
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Entry
134523703 CDS
T10910
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134523703 (RC3H2)
04121 Ubiquitin system [BR:
crid04121
]
134523703 (RC3H2)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
134523703 (RC3H2)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134523703 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
134523703
NCBI-ProteinID:
XP_063209036
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All DBs
Position
15:9089879..9117246
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AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIATLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSP
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYTEDCADAKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPIPTSVSNASCLPISTAVSGGSPSLKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtgaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaaacttgtgacactggtgaattgt
cagctggtagaggaagagggtcgggttagagctatgagggcagctcgatcactgggagag
agaaccgttacagaactgatcttgcagcaccagaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagaacat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcccacatgcaatccattattgacaag
ctccaatctccagaatcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcgtctccaacatgggagcagctggaaaatgcaatggtcgct
gtaaagactgtggtacatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgtttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaacgtcatttctgtcata
ggaagccctgaagcaacagggaagatggtgccaagtactaacggaatagctactctagaa
agtggtgttccccagttgatccctcgctgtgcagacacctccttgagagctttggagaac
accaagaagggagggaagactggagccaatggtcagaatgtttctggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccatttgttcccagagtacccgtctaccctccgcattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatacgaagttccacagtaccctcagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggc
tattactctgtggcttgtcaacctccaaacgaacagaggactgtgcctttaccgagggag
ccttgtggtcatttgaagactggttatgatgagcaattaagacggaagccggagcaatgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcggagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccatgg
tcttgtggcactattgggtcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgctaatggatttggacagcggggatgttaaaaggagagtacat
ttgtttgaaactcagagaagggcaaaggaagaagatcctataatcccatttagcgatgga
ccgattatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacgaca
gatcctattcaggccactgcttcccaaggaagtgctacgaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgttgactcaagatggagtgcctatggctcagattctcct
tcatcagcacgttatgcggaacgggacaggttcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctactgagtattgagttacagcaggccaaaagtaactcg
ttattacttcaaagagaggcgaatgcactagccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatactgaagattgtgcagacgcaaagccagatcgagacattgaattggagctg
tcagcccttgatacagatgaacctgatgggcaaggtgaacaaattgaagagattctggat
atacagctaggtattagttctcaagatgatcagctgctcaatggaacaactgtagagaat
gggcacccactaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcccaacatctgttagcaatgcaagctgcctgcccatcagcaccgcagtcagt
ggtggcagccccagtttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
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integrated database retrieval system
