Chroicocephalus ridibundus (black-headed gull): 134523704
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Entry
134523704 CDS
T10910
Symbol
SPTAN1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04210
Apoptosis
crid04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134523704 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134523704 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crid04812
]
134523704 (SPTAN1)
Cytoskeleton proteins [BR:
crid04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134523704 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
134523704 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Vip3A_N
Motif
Other DBs
NCBI-GeneID:
134523704
NCBI-ProteinID:
XP_063209043
LinkDB
All DBs
Position
15:6425192..6477641
Genome browser
AA seq
2510 aa
AA seq
DB search
MLSSFRKVKVQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSSLRRQKLEDSYRFQF
FQRDADELEKWIQEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANSGAIIKLDETGNQ
MINEGHFASETIRTRLQELHRLWELLLEKMREKGVKLLQAQKLVQYLRECEDVLDWINDK
EAIVTSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAGKLIQEQHPEEELIKS
KQDEVNASWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKGQLMASDDFGRDLA
SVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPINASQIQVKREELIANWEQIRT
LAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKG
EIDAHEDSFKSADESGQALLAAGHYASDEVKEKLTILSDERSALLELWELRRQQYEQCMD
LQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDE
FATKLIQNNHYAMDDVATRRDALLSRRNALHERAMYRRAQLADSFHLQQFFRDSDELKSW
VNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYASDE
VAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGK
DLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDADNIKKKQEALVARYEA
LKDPMVARKQKLADSLRLQQLFRDIEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQA
LQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKIKLNELNQKWDSLKAKASQRRQDLED
SLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQA
LREQAQSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE
VNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIALRQEQIDNQTLITKEVGSVSLRMKQ
VEELYHSLLELGEKRKGMLEKSCKKFMLFREANELQQWINEKEAALTNEEVGADLEQVEV
LQKKFDDFQKDLKANESRLKDINKVANDLESEGLMADEVQAVQQQEVYGMMPRDETDSKT
ASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEW
IEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAE
DLQEKCTELNQAWNSLGKRADQRKEKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELA
KDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERT
DLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHE
DFDKAINVQEEKIAVLQSFADQLISADHYAKGVIANRRNEVLDRWLRLKAQMIEKRSKLG
ESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANA
DRIRGVIDMGNSLIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNF
NTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADS
LMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEK
KLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDMGKKLSDDNTIGKEEIQQ
RLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLA
AIQGLLKKHEAFETDFTVHKDRVNDVCTNGEDLIKKNNHHVENITAKMKGLRGKVSDLEK
AAAQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDA
GLQAFQQEGIANITALKDQLLAAKHIQSKAIEARHASLMKRWNQLLANSAARKKKLLEAQ
EHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSA
QADFNQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEEN
DKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVYQYEVGDDLSGRSCMVEESGTLE
SQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGM
RMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMV
EEGEPDPEFESILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKP
YVTKEELYQNLTREQADYCISHMKPYMDGKGRELPSAYDYIEFTRSLFVN
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcatcgtttcgtaaagtcaaagtccagaaaatggatccgagcggtgtaaaagtg
ttggaaacggcagaagatatccaagaaaggcgtcaacaagttttggaccgttaccacagg
ttcaaggaattatcttctctaaggcgccaaaaacttgaagattcctatcgattccagttt
ttccagcgtgatgcagatgagcttgaaaaatggatccaagagaaactgcagatagcatct
gatgaaaattacaaagacccaagcaatttacaggggaagctgcagaagcaccaagccttt
gaagctgaggtgcaggccaattcaggggctatcattaaactggatgagactggaaatcag
atgattaatgaaggccattttgcatccgaaaccataagaactcggctgcaggagctgcac
cgactatgggaattactgttggagaagatgagggagaagggagtcaaattgttgcaagca
cagaagctggtgcaatacttacgggaatgtgaagatgtcttggactggatcaatgacaag
gaagcaatagtgacctcagaagagcttgggcaggacttggagcatgttgaggttttacaa
aagaagtttgaagagttccagacagaccttgcagctcatgaggagagagtaaatgaagtg
aaccagtttgctggcaaacttatccaggaacaacacccagaagaggaactgattaagtcc
aaacaggatgaagtaaatgcaagctggcagcgacttaaggggcttgcccttcagaggcaa
ggaaaactctttggggcagctgaagttcagcgcttcaacagggatgtggatgaaacaatc
agctggattaaggagaaagggcagttgatggcctcagatgattttggcagagacttagcc
agtgtgcaggctttattgcgtaagcacgaaggcctggaaagagatcttgcagctctggaa
gataaggttaaggccctttgtgcagaagctgaccgtttgcagcaatctcacccaataaat
gcttctcaaattcaagtgaaacgggaggagctgattgccaactgggaacagatcagaact
ctggcagcagagaggcatgctcgccttaatgactcctacaggctgcagcgctttcttgca
gacttccgagacctcaccagctgggtgactgagatgaaggctctgataaatgctgatgaa
ctcgccaatgacgtggctggagcagaagcccttctagatagacatcaggaacataaggga
gaaattgatgcccatgaagatagcttcaaatctgctgatgagtccggccaggctttgctt
gctgctgggcactatgcttctgatgaagttaaagaaaagctgaccatcctctcagatgaa
agatctgccttgctagagctatgggagcttcgtagacagcagtatgaacagtgcatggac
ctgcagcttttctacagagatactgaacaagttgacaactggatgagcaaacaagaagca
tttctgctgaatgaagaccttggtgattctctggatagtgtggaggctcttctaaagaag
catgaagactttgagaaatccctaagtgcccaagaggagaaaatcacagcattggatgag
tttgctactaaattgattcagaataaccattacgccatggatgatgttgctacacgcaga
gatgctctgctgagccgccgaaatgcccttcatgaaagagctatgtaccgccgtgctcaa
ctggcagattctttccatctgcagcagtttttccgagactctgatgagctaaagagttgg
gttaatgaaaaaatgaaaactgcgacagatgaggcatacaaggatccgtcaaacttgcaa
ggtaaagttcagaaacatcaggcttttgaagcagagctttctgctaatcagagtcgtatt
gatgcactggagaaagctggccagaagttgattgatgtcaatcactatgcatctgatgaa
gtggcagctcgtatgaatgaagttatcagcttgtggaaaaaacttctggaggccactgag
ctcaaaggtataaaactgcgtgaagccaatcaacagcagcagtttaatcgcaatgtggaa
gacattgagttgtggctgtatgaagtagagggacacttggcttctgatgattatggaaaa
gatcttactaatgttcagaatcttcagaagaaacatgccctgctagaggcagatgttgct
gcccatcaggatcgtatagatggcattaccatccaggcacgccagttccaagatgctggg
cactttgatgctgacaatatcaagaagaaacaagaagctttagtagctcgttatgaagct
ctaaaggatcctatggtagctcgcaagcagaagcttgcagattctcttcgcctgcagcag
cttttccgtgacattgaggatgaagagacctggattagagaaaaagaacctattgcagct
tcaacaaaccgaggcaaggacttaattggtgtccagaatctgctaaagaagcaccaggct
ttgcaggcagaaattgcaggccatgagccccgcattaaagcagtcacacagaaaggaaat
gctatggtggaagagggacattttgcggctgaggatgtgaaaatcaaattgaatgagcta
aaccagaaatgggactctctgaaagctaaagcatctcagcgtcgacaagacttagaggat
tccctgcaagctcagcagtacttcgctgatgctaatgaggccgaatcctggatgagggaa
aaagagcccattgtaggcagtacagactatggaaaagatgaagactctgctgaggctctt
ctgaagaaacatgaagctttgatgtctgatctttccgcttatggcagtagcatacaggcg
ctaagggaacaggcccagtcatgcaggcaacaagttgctcccacagatgatgaaactgga
aaagagctcgttctggccctctatgattaccaagagaagagtccccgggaggtgacaatg
aaaaagggagatatcctgaccttactcaacagcaccaacaaggactggtggaaggttgaa
gttaatgaccgtcagggctttgtaccagctgcctatgtgaaaaaactagatcctgcccag
tctgcatcccgagagaatctcctggaagagcaaggcagcatagcattgcgacaggagcaa
attgacaaccagactctcataactaaggaagtcggcagtgtatctctgcgtatgaaacag
gtcgaagaactgtatcactctcttcttgagctgggagaaaaacgtaaaggcatgctagaa
aaaagctgcaaaaaatttatgcttttccgtgaagctaatgagcttcaacagtggattaat
gagaaggaagctgcactcacaaatgaggaagtaggtgctgatctggagcaggttgaggtg
ctacagaagaaatttgatgattttcagaaggatttaaaagctaacgagtcacgtctgaag
gacataaacaaggttgcgaatgacctggagtcagaagggttgatggcagatgaagtgcaa
gcagtacagcaacaggaagtctatggtatgatgcccagggatgaaaccgattctaagaca
gcctctccttggaagtctgcacgtttgatggtacacacagtggcaacctttaactcaatc
aaggagctgaacgaacgctggagatctctgcagcagttagcagaggagcgaagccagctg
ttgggcagtgcccatgaagtccagagattccacagagatgctgatgaaacaaaagaatgg
atagaggagaagaatcaagcattaaatacagacaactatggacatgacttagccagtgtg
caggctctgcagcgcaaacatgaaggctttgagagagacttggcagctcttggagacaag
gtgaattctcttggtgaaactgcccagcgtctgatccagtcacatccagaatctgctgaa
gatctccaggaaaaatgcactgagttgaatcaggcttggaatagtctgggaaaacgtgct
gaccagcgcaaagagaagctgggagattctcatgacctgcagcgtttcctcagtgacttc
agggaccttatgtcttggatcaatggaatccggggcctggtctcctcagatgaacttgca
aaggatgtgactggagctgaagcgttattggaaaggcaccaggagcaccgcactgaaata
gatgcaagggctggcaccttccaggcatttgaacagtttgggcaacaacttctggctcat
ggacactatgccagcccggagatcaaggagaaactggatattctagatcaagaacgaaca
gacctagagaaggcctgggtccagcgcagaatgatgctagaccagtgcctagaactacag
ctgtttcatcgggactgtgaacaagctgaaaactggatggctgcccgagaggctttccta
aatacagaagataaaggagattccttagacagtgtggaggcactcatcaagaaacatgaa
gattttgataaggcaatcaatgtccaggaagagaaaattgctgtcttacagtcttttgct
gaccagctgatctctgctgatcattatgcgaaaggagtcattgctaacagacgcaatgag
gttctggacaggtggcttcgtctgaaagctcaaatgattgaaaagagatcgaagctagga
gagtctcagacactccagcagttcagtcgtgatgtggatgaaatagaagcttggatcagt
gaaaagctccaaactgcaagtgatgagtcatataaggatcccacaaatatccagctttcc
aaactgctgagcaagcaccagaagcaccaagccttcgaagctgagctccacgccaatgca
gatcggatccgcggagtcatcgatatggggaactcgctgattgaaagaggagcatgtgct
ggcagtgaggatgctgtgaaggcacgcctagctgccctggctgatcaatggcaattcctg
gtacagaaatcagcagagaagagtcagaaactgaaagaagctaataagcaacagaatttc
aatactggaattaaggactttgatttctggctttcagaggtggaggctttgttggcatct
gaagactatgggaaggacttggcatcagttaacaaccttctgaagaaacaccagttactg
gaagctgatatatctgctcatgaggatcgtctgaaggacctgaacagtcaggctgacagt
ttgatgaccagcagtgcttttgatacatcccaagtaaaagacaaacgtgagaccattaat
gggcgcttccagaggattaagagtatggcagctgcccgccgtgcgaagctgaacgagtcc
caccgtttgcatcagtttttccgcgatatggatgatgaggagtcctggatcaaagagaag
aaactgttggttagctcagaggactatggcagagacctaaccggtgtgcagaaccttagg
aaaaaacacaagcgcttagaagcagaattagctgcccacgaacctgctatccagggtgtg
ctagacatgggtaagaagctttcggatgataacacgattggaaaggaggagatccagcag
agactggctcagtttgtggatcactggaaagagttgaaacagctggcagctgctaggggt
cagcgtctagaggagtctctggagtaccagcagtttgtagcaaatgttgaggaagaagaa
gcctggatcaatgagaaaatgacattggtagccagtgaggattatggggacacccttgct
gctatccagggcttgctgaaaaagcacgaagcatttgagactgattttactgtccacaaa
gacagagtgaacgatgtttgtactaacggagaggatctcattaaaaagaacaatcaccac
gtggagaacattactgccaagatgaagggcctcagaggcaaggtatcagatctggagaaa
gcagcagctcagaggaaagccaaattggatgagaactctgccttcctccagttcaactgg
aaagcagatgtagtggagtcatggataggtgagaaggaaaacagtctaaagacagatgat
tatggacgtgacctctcttctgtgcaaacgctactcaccaaacaggaaacttttgatgct
ggacttcaggctttccagcaggagggaattgcaaacatcactgcgctgaaagaccagctg
ctggcagccaaacatatccagtcaaaggccattgaggctcggcacgcgtccttgatgaaa
cgctggaatcagctacttgctaattctgctgccaggaaaaagaaactcttggaggctcag
gagcatttcagaaaggttgaggatctgttcctgacttttgctaagaaggcgtctgccttc
aacagttggtttgagaacgctgaagaggacctgacagatcctgtgcgctgtaactcgctg
gaagaaatcaaagccctgcgagaagctcatgatgctttccgttcttcacttagctctgcc
caagctgacttcaaccagctggcagagcttgatcgccagatcaagagcttccgtgtagcc
tccaacccatatacgtggtttactatggaggctcttgaagaaacctggaggaatctgcag
aaaattatcaaggaacgtgaactggagctgcagaaggaacagcgaaggcaggaagaaaat
gacaaactgcgccaggaatttgctcagcatgctaatgctttccatcagtggattcaggag
accaggacttacctgctagatggcatagcatatcgtcgtgtcattcgtgtctatcagtat
gaagttggggatgatctatctggaaggtcttgcatggtggaagaatcgggaacactggaa
tcgcagctggaagctactaaacgtaagcaccaggagatccgagctatgaggagccagctg
aagaagattgaggaccttggggcagccatggaagaggcacttatcttggacaacaaatac
acagaacacagcaccgtggggctggcacagcagtgggaccagcttgaccagctggggatg
agaatgcagcacaacctggaacagcagatccaagctcgaaacacaactggagtcaccgag
gaggccctgaaggagttcagcatgatgttcaagcactttgacaaggacaaatctggacga
cttaatcaccaggagtttaagtcttgcttgcgctctctcggctatgacctgcccatggtt
gaggaaggagagccagacccagagtttgagtctattcttgacactgtagatcccaatagg
gatggacacgtctcgctgcaggagtacatggcgtttatgatcagcagggaaacagagaat
gtgaaatccagcgaggagatcgagagcgctttccgcgccctcagctcagaggggaagccc
tacgtgaccaaggaggagctctaccaaaacctgacccgggaacaagccgattactgcatt
tctcacatgaagccctacatggacggcaagggcagagaacttccttctgcctacgactac
atagaatttacacgttcactctttgtgaactga
DBGET
integrated database retrieval system
