Chroicocephalus ridibundus (black-headed gull): 134523725
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Entry
134523725 CDS
T10910
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134523725 (GAPVD1)
Membrane trafficking [BR:
crid04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134523725 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
134523725
NCBI-ProteinID:
XP_063209098
LinkDB
All DBs
Position
15:complement(8076228..8106141)
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AA seq
1488 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTSLVGF
MRNVMSSDQLKEDRMALENLLANLPQNRPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNILMDQHGDHEGSSQETIPEVQPEE
VLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQ
LTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAMGGNEARLPN
FGSHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRPGNEERELPMPA
TSAGAAVLMAASQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIP
FRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVN
YDGAEAMGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQSSAFSYRDAKKKLRLALCS
ADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSR
FDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFT
TVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQL
QDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLR
EAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVL
IKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatatacacacgctggcacatcacctcaagcaggaacggctgtatgta
aactcagaaaagcaacttattcaaaggctcaatgcagatgtattgaagacagctgaaaag
ctgtaccgcacagcatggatttccaagcagcaaaggattaacttggacagactgatcata
acaagtgctgaagcttctcctgctgaatgttgccagcatgctaaagtcttggaggacacg
cagtttgtggatggttataagcagttgggatttcaggagactgcttacggagaattccta
aacagattgagggagaaccctaggcttattgcatcttgcctggttgccggagagaagctc
aaccaggacaacactcagagtgtcattcacacagtctttacatccatttatggcaattgc
atcatgcaggaggatgagagctacctcctccaggtcctccgttacttgatagaatttgaa
ctcaaagaaagcgacaacccaaggcggctgctgagacgaggcacctgtgccttcagcatc
ttattcaaacttttctctgaaggactcttttctgcaaaactttttcttactgcaacttta
cacgagccaatcatgcagcttctggttgaagatgaagaccacctggaaactgatcccaac
aagttaattgagagattctctccagtgcaacaggaaaagttatttggagagaaaggcaca
gaaaagttcaagcaaagagtccaagagatggttgactccaatgaggccaaactggtgacc
ctggtgaacaaattcattggctatctcaaacaaaacacttactgttttcctcacagcttg
agatggattgtgtcacaaatgtacaaaacgctctcgtgtgtagacaggctggaggttggg
gaggtcagagcgatgtgcacagatcttcttctagcgtgtttcatctgtcctgcaatcgtt
aacccagaacagtatggaatcatttctgatgctcctataaatgaggtggcaagatttaat
ctgatgcaggttgggagacttctgcagcaattggcaatgacaggttctgaagagggagat
ccacggatgaagagcaaccttgctaaatttgacaaaagctgtgtggctgctttcctggat
gtagttattgatgggcgtgcggttgaaactcctccaatgtcttctgttaaccttctggag
ggcttgagtagaacagtggtttacatgacatacagccagctaactagtctggttggcttt
atgcggaatgtaatgtcaagcgatcagcttaaggaagatcggatggctttggaaaacttg
ctggcaaacctaccccagaacagaccagggaaaagcagcagccttgaaatgactccctat
aatactccacaactttcccctgcaactactccagctaacaaaaaaaatcgattgccaata
ggacagcaattggcagccattactgcctgggatacttctgctaccaatctttcagctcat
ataactctagtaaccccttttgcaactcgtagcagaagcagatcaaatattctaatggat
cagcatggagatcatgagggatcctcccaggagactatcccagaggttcagccggaagaa
gtgctggtgatttctttggggacaggtccacagattactccaggaatgatgtcagaaaat
gaggtcttaaatatgcagcttgcagatggcggacaaggagatgtccctgttgatgaaaac
aaactccatggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggaatatctgaaggtccttcaaatcgctccaactctgtgtcatctttggatttagaaggg
gagtctgtgtcggagcttggcgcaggcccctccgggagcaacggcgtcgaagctctgcag
ctgttagagcatgaacaagccacaactcaggataatcttgatgacaagctccgtaaattt
gaaatccgggatatgatggggttgactgatgacagagatatatcagaaactgtgagcgaa
acttggagtacagatgtcttgggaagcgactttgatccaaatattgatgaagatcgtttg
caagaaatagcaggtgcggctgcagagaacatgctaggcagcttgctgtgtttaccaggt
tcaggatccgtgttgcttgatccctgcacaggttcaaccatatcagaaaccacaagcgag
gcatggagcgtggaagtattaccaagtgattcagaggccccagacttaaaacaagaggaa
agactccaagaactggaaagctgttcagggctgggtagcacatctgatgacacagatgta
agggaggtcagttcccgacccagtacgccaggcctcagcgttgtatcaggtattagtgca
acatctgaagatattcctaataagattgaggatctgaggtctgaatgtagctctgatttt
gggggaaaagattctgtgacaagtcctgacatggatgaaacggcccatggagccagtcag
ttgacatctcctccttctcagacagattctttgcttgcattgtttgaccctctgtcctca
aatgagggtgtatcagctgtagtaaggcccaaagtacactatgcaagaccctcccatcca
ccaccggatccaccgatcttggaaggagctatgggaggtaatgaggcccgattgccaaac
tttgggtctcacgctttaattccaactgatttagaagcattcaagcagaggcattcttat
ccagagaggctagtccgcagcaggagttcagatatagtatcatcagtccggagacctatg
agtgatcctggctggaacaggcgtcctggtaatgaggagagggagcttcctatgccagcc
accagcgctggagcagctgttctcatggccgcatctcagtcatcgtcttcatctcccagt
aaagactcctctaggggagagattgaggagcgaaaagacagtgatgatgagaagtctgac
agaaacaagccctggtggaggaaacgttttgtgtctgctatgcccaaagctcctattcca
tttagaaagaaagaaaaacaagaaaaagacaaagatgatatggtgcctgacagatatgca
acacttcaagatgatcccagcccaaggctcagtgcgcaggcgcaagctgcggaggacatt
ctggacaaatacaggaatgcaattaagcgaaccagtcctagtgaaggagccatagtaaac
tatgacggtgcagaggctatgggggatggtgagagtatgcacgactctccacgtgatgag
gctttacaaaacatgtctgcagatgatctcccagactctgcaagtcaagtagcacagcca
caaagttctgctttctcctatagggatgcaaagaagaaattgagattggctctttgttca
gcagattctgtggccttccccatgttgacacattcaacaaggaatggcctaccagatcac
acagacccggaagataatgaaattgtgtgcttcttgaaagttcagctagctgaagctatt
aacctccaagacaagaacttgatggcccagctgcaagagacaatgcggtgtgtaagccgc
tttgataacaggacctgtcgaaagctgctggcatctattgcagaggactataggaaaaga
gctccatatattgcttatttaactcgatgtcgccaaggcctacaaacgacacaagcgcac
ttggaaaggctgctgcaaagagttctgcgagataaagaagtggccaacagatacttcacg
acagtatgtgtgaggttactgctagagagcaaagaaaagaaaataagggagtttattcaa
gatttccagaaactcacagcagcagatgataaaacagctcaagttgaggattttcttcag
tttttatatggggctatggctcaggatgccatatggcagaatgccagtgaagaacagctt
caggatgcacaattagctatagaacgcagcgtgatgaatcgtattttcaaactcgcattc
taccctaatcaggatggagatattttgcgtgaccaggtccttcatgagcacatacagagg
ttatctaaagtagtgactgcaaaccacaaagcgcttcagatacctgaggtatatctccgg
gaggcaccatggccatctgcacagtctgaaatccgcacaataagcgcttataaaacccct
cgagacaaagtacagtgtatcctgcgaatgtgttcaaccatcatgaacctgcttagtttg
gcaaatgaagattcagtacccggggcagatgattttgttcctgttctggtctttgtcctt
ataaaggcaaatccaccttgcttgctgtccactgttcagtacattagtagtttctatgcc
aactgtttatctggagaagaatcgtactggtggatgcagttcacagcagcagttgaattc
attaaaactattgatgatcgcaagtaa
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