Chroicocephalus ridibundus (black-headed gull): 134523861
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Entry
134523861 CDS
T10910
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04010
MAPK signaling pathway
crid04020
Calcium signaling pathway
Brite
Ion channels [BR:
crid04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
134523861 (CACNA1B)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
134523861
NCBI-ProteinID:
XP_063209366
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All DBs
Position
15:2653035..2964417
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AA seq
2364 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGDEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDGRAASEGPIQQGTAP
AETSSGSSYNMLKRAAIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNESSSYF
RRKEKMFRFFIRRMVKAQSFYWIVLCVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGL
FLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLR
IFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTT
NFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRSGMFSSIYFIVLTLFGNYTLLNVF
LAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGT
VSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTL
HIRPDMKTHLDRPLVVEPRSEGRNNINKLSPVDVQEVEQTKVSSTDGAEAPRKHHRHRDK
DKLGEQEKGDLTKDENGESGANNKEERHRQHRSRSKEVEAGSKEGKSDRNRGQEGGKRHH
RRGSVEEGAEKEHRRHRTHRHSAERQGKEGNGTINGARSERRSRHRGGSRSGNREGEPGS
KGENGEEPHRRHRFRNRALSTYDSVEKENGEKEGEAGEKEHRNHQPKESQCEIEASGSVS
VPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMN
NVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIV
IALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLW
NILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSL
KNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPR
EWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVY
FVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQS
FQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECV
LKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADNFINLSFLRLFRAARLIKLLRQ
GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALNDETSINRHNNFRTF
LQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKNECGSDFAYFYFVSFIFLCSFLM
LNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPP
LGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDA
ELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVHQPPG
GLCQPGPVSLFHPLKATLEQTQPAAFNNAKAFLRQKSSASLNNGGALPAPEGGIKESSSW
GTQRTQDVFYETRTPAFERGHSEEIPIERVVEMREISPTLANGEHQPGLESQGRAASMPR
LAAETQPIPDTSPMKRSVSTLTPQRPHPMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQ
KSLDRSPHQLADGEAVAQSGESSSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRD
RSQPKSADQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPR
PSITYKTANSSPVHFTSFQTGLPTFSPGRLSRGLSEHNALLRGDQQPPPPAVARIGSDPY
LGHREDADSPYRAVPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHQIRRVPNGYHYTLG
LNTGPGTGTRGRSYYHEADEDDWC
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataagcagtcg
atggctcagagggccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatatgcc
aagagaataacagaatggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggacggagacaagacaccaatgtcagag
agattggatgacactgagccgtactttattggaatattttgttttgaagctggtataaaa
atcatcgctctggggtttgtttttcataaaggctcttacctccgaaacggttggaatgtg
atggattttgttgtggtcctcacagggattctggcaactgctgggactgattttgacctg
cggaccctgcgagccgtccgggtgttacgacccctgaagcttgtgtctggaatcccaagc
ttgcaggttgtcctcaagtccatcatgaaggcgatggtgcccttacttcagatcgggctg
ctcctcttcttcgccatcgtgatgtttgccatcatcgggctggagttttacatggggaag
tttcataaaacctgcttctctaacgagacgggtgatgaggtgggagattttccttgcgga
gaggagcctcctgccaggcagtgcgagagcgggaccacctgcagggagtactggcaaggg
cccaactacggcatcaccaactttgacaatatcctctttgctgtgctcaccgtcttccag
tgcatcaccatggagggatggacagacatcctctacaatacaaatgacgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaagaacgagaaagggtagaaaatcgt
cgagcttttctcaagcttcgtagacagcagcaaatcgaacgggaactaaatggatacttg
gagtggatcttcaaagcagaggaggtcatgctggcagaagaagacaagaacgcggaagag
aaatctcctctggacgggagggccgcctcggaagggccgattcaacaaggcacggcaccg
gcagagactagcagcggcagcagctacaacatgttgaaaagagccgcaataaagaagagt
aaaaacgacctgattcatgctgaagaaggtgaggaccatttcacagacatttgctccgtt
gggtctccttttgcccgtgccagtttgaagagtgggaagaacgagagctcgtcttacttc
aggaggaaagagaaaatgttccggttcttcattcggcgcatggtgaaggctcagagcttc
tactggatcgtcctctgcgtggtggccctcaacacgctctgcgtcgcgatggtgcactac
gaccagccggagaagctcaccactgcgctgtatttcgcggagtttgtttttctgggtctg
ttcctcactgagatgtctttgaagatgtacgggctggggccaagaaactacttccactct
tcgttcaactgctttgactttggggtcatcgtgggaagtatatttgaagttatttgggct
gcagtgaaaccgggtacctcgttcggcatcagcgtgttgagagcgcttcgcctgctgagg
attttcaaagtaaccaagtactggaactccctgaggaacctggtggtctccttgctgaac
tccatgaagtccatcatcagtttgctcttcctgcttttcctgttcatcgtggtgtttgct
ttgctggggatgcagctctttggaggacagttcaatttccaagatgaaacaccaaccacg
aatttcgataccttccctgccgccatcctcacggtattccagatcctgacgggggaagac
tggaacgcggtgatgtaccacgggatagagtcgcagggcggcgtccgctcggggatgttc
tcctccatttacttcatcgtcctgacgctgtttggtaactatacgctcctgaacgtcttc
ttggctatcgctgttgacaatctggccaatgcccaagagctgaccaaggatgaggaggag
atggaggaagccaccaatcaaaagctcgctctgcaaaaggccaaggaagtggccgaagtc
agccccatgtcggcagctaacatttctatagccgcttttgtaaagcaaactcgaggtact
gtatctcgcagctcgtcagtctccagcgtaaattcacccaagcagcagaactcctccaaa
tccaagtccgtttgggagcagaggaccagccagatccggatgcacaatttccgagccagc
tgcgaagcgctgtacaacgagctggatccggaggagcgcgtgcgatacgcgaccaccctg
cacatcaggccagacatgaagactcacctggatcggccgctggtggtagagccgaggagt
gaagggaggaacaacatcaacaagctgagccctgtggacgtgcaggaggtggagcagacc
aaagtcagctccaccgatggcgcagaagctccgcggaagcaccaccggcatcgggataag
gacaaattgggagagcaagagaagggggacttgaccaaggatgagaacggggaatctggt
gccaacaacaaggaggagcggcacaggcagcacaggagccgcagcaaggaggtggaagcg
gggagcaaggaagggaaaagcgatcgcaacaggggccaggaagggggaaagaggcaccat
cgccgagggtcggtggaagaaggcgctgagaaggagcaccgtaggcatcggactcaccgg
cactctgctgaacggcaaggcaaggaaggcaacgggacaatcaacggggccaggagcgag
cggcgttcccgacaccggggagggtcgaggtctgggaacagggaaggagagccgggatcc
aagggcgagaatggagaagagcctcacagacgccacaggttcaggaacagggcgctgtcg
acgtacgactcggtggagaaggagaacggggagaaggagggggaggctggcgagaaggag
caccggaatcatcagcccaaggagagccagtgtgagattgaagcgagcggaagcgtgagt
gtccccgtgcacaccctccccagcacctacctgcagaaagtgccggagcagccagaagat
gctgacaaccagaagaacgtgacgcggatgattcagccccctctggacaaaaccaccact
gtgaacatccctgtcactatcactgccccgccgggggagaccaccgtcataccaatgaac
aacgttgaattcgaaagtaaaactgaggagaagaaagacgtcgatgacttgacgaaaaac
gggccgaaaccaatcttgccttacagttccatgttcatcctaagtcctacaaatccgatt
cgccgcctcttccactacatcgtcaacctgcgctatttcgagatggtcatcctcatagtg
atagccctcagcagcatcgccctggctgcagaagaccctgtccaagccgagtcaccgagg
aatgatgctctgaaatacttggattatatatttacgggtgtctttacgtttgagatggtg
atcaagatgattgacttggggctgttactccaccctggctcctacttccgtgacctgtgg
aatatcctggacttcattgtggtcagtggggccttggtggcatttgccttctcaggaacc
aaaggcaaggacatcaacacaatcaagtcactgcgagttctccgggtcctaagaccgctg
aagaccattaaacggctcccaaaactaaaggctgtctttgactgcgtggtgaattccctg
aagaacgtcctcaatatcctcatagtctacatgctcttcatgttcatttttgccgtcatt
gctgtgcagctcttcaaaggcagattcttctactgcaccgatgagtcgaaggagctggag
aaggactgcaggggtcagtacctcgattatgaaaaaaatgaggtggaggcgcagcccagg
gaatggaaaaaatacgagtttcactacgacaacgtgctctgggctctgctcacgctcttc
accgtctccacgggcgaagggtggccaactgtgctgaagcactcagtggatgctacctac
gaggaacagggtcccagccctggctaccgaatggaaatgtctatcttttacgtggtgtat
tttgttgtcttcccttttttctttgtgaacatctttgtggcgttaatcatcatcaccttc
caagagcaaggagataaagtgatgtcagagtgcagcctcgagaaaaacgagagggcctgc
atagacttcgccataagtgccaagccactgacccgctacatgcctcagaacaagcaatct
tttcagtacaagatgtggaaatttgtggtgtcccctccctttgagtattttatcatggtc
atgattgcgctcaataccattgtcctaatgatgaagttctatgatgctccagaagcgtat
gaagaaatgttgaaatgcctgaatattgtgtttacgtccatgttttcaatggaatgtgtg
ctgaagatcattgcctttggtgtgctgaattatttccgggatgcctggaatgtctttgat
tttgtaacagtgttgggaagtattactgatattttagtaacagagattgcggacaacttc
atcaacctcagcttcctgcggctcttcagggcagcgagacttatcaagctccttcgccag
ggttacactatccgcatcttgctctggacgtttgtgcagtcttttaaggccttgccttat
gtgtgtctcctcattgcaatgctcttcttcatctatgccattatcggcatgcaggtattt
ggaaacattgcactgaatgatgaaacctccattaatcggcacaataacttccgtaccttc
ctccaagccctgatgcttctgttcaggagcgccacgggggaagcctggcacgagatcatg
ctgtcgtgcctcagcaacagagcctgcgacccgctctccggcctcaccaaaaacgaatgc
ggcagcgattttgcctatttctacttcgtctccttcatcttcctgtgctccttcctgatg
ttaaacctgtttgtggctgtgattatggacaattttgaatacctgaccagagactcctcc
atccttgggccccatcatttggatgagtttgttcgtgtctgggctgaatacgacccagct
gcctgcgggcgcatcagttacacagacatgtatgagatgctgagacacatgtccccacct
ctaggccttggaaagaaatgccctgctcgcgttgcctataagcgcctggtgcggatgaac
atgccgatctcacccgaagatttaaccgtccacttcacgtccacgctgatggccttgatc
cgcaccgccctagaaatcaaactcgcctcagggggtgttaaacagcaccagtgcgatgct
gagttgagaaaggagatctcgctggtttggcccaatctgtcccagaagactctggatctg
ctggtgcctcctcacaaacctgatgagatgaccgtggggaaggtctacgcagcgctgatg
atattcgacttctacaagcagaataagaacagcagggaacaggtccaccagccgcccggg
gggctgtgccagcccggaccggtgtcactcttccaccccctgaaggccactttggagcaa
acccagcccgcggcgttcaacaacgcgaaggccttccttcgccagaaaagctcagcctcg
ctcaacaacggcggcgcattgccagcgccagagggtgggatcaaagagtccagttcttgg
gggactcaacgcacccaggatgtgttttatgaaaccaggacaccagcttttgaacgaggc
cactcagaagaaatccccatcgaacgggtggtagaaatgagagaaatcagccccacactt
gccaacggagagcaccaaccaggcctggagagccaggggcgggcggcttccatgccacgc
ctggccgccgaaactcagcccatcccggacaccagccccatgaaacgctccgtctccacg
ctgaccccgcagcgccctcaccccatgcacctctatgaatattccttggagcgcatgccg
ccggagcaagggcatcaccaccatcaccaccgctgccaccggcggaaagagaagaagcag
aagtccttggacaggtccccgcatcagctggccgatggagaagctgtggcccagtctggt
gagtcttcttccaaggacaagaagcaggaacgcggccggtcccaagagaggaagcagcac
tcttcctcctcctccgaaaagcagcgcttttactcctgcgaccgctacggcagccgggac
cgttctcagcccaagtctgccgatcagagcaggcccacctcacccaacggagggccggag
caaggtccacacagacagggcagtggttcagttaatgggagccccttgctgtcgacatct
ggtgctagtaccccatgccggggtcggaggcagctcccacagactcccctgaccccacgt
cccagcatcacttacaagaccgctaactcctcgcccgtgcacttcaccagtttccaaacc
ggcctccccactttctccccgggacgcctgagccgcggcttgtccgagcacaacgcgctg
ctgcgcggggaccagcagccgcccccgccggcggtggcccgcatcggctccgacccctac
ctgggccaccgcgaggacgccgacagcccctaccgcgccgtgccggaggacaccctcacc
ttcgaggaggcggtggccaccaactcgggacggtcctcaaggacttcttacgtctcctcc
ttgacctcccagtctcaccaaatccgcagggtgcccaacggctaccactacacgctgggg
ctcaacacgggccccgggactggcaccagaggacggagttactaccacgaagccgacgag
gacgactggtgctag
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