Chroicocephalus ridibundus (black-headed gull): 134523917
Help
Entry
134523917 CDS
T10910
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04020
Calcium signaling pathway
crid04080
Neuroactive ligand-receptor interaction
crid04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134523917 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134523917 (GRIN1)
04082 Neuroactive ligand signaling
134523917 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134523917 (GRIN1)
Ion channels [BR:
crid04040
]
Ligand-gated channels
Glutamate (ionotropic)
134523917 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
134523917
NCBI-ProteinID:
XP_063209500
LinkDB
All DBs
Position
15:complement(1189334..1229296)
Genome browser
AA seq
1070 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESFSAPAAERGRSPRLAAPAPWRLVL
PACANQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPW
SQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgaggctgctgctgctcgccctgctcttctcttcctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagccaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccctactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccatgaaggtcgtgctgctcaaaagaagctg
gagaccctcttggaggagaaagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgacccc
ggaaccaaaaatgtgacgtcgctgctgctggaggcaaaggagctggaggctcgtgtcatc
atcctttctgccagtgaggatgatgcggccacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctg
cgttacgcccctgatggagtgatcggtttgcagctcatcaatgggaagaacgagtcagcc
cacatcagcgacgctgttgcggtggtggcccaggccgtgcacgacttgtttgagaaggag
aatatcacagacccgccgcggggctgcgtgggcaacaccaacatctggaagacaggaccc
cttttcaagagggtgttgatgtcctccaagtactcggagggtgtcaccggccgggtggaa
ttcaatgaggatggggacaggaagtttgccaactacagcatcatgaatctgcagaatcgg
aaactggtccaagttgggatttacaacggcagccatgtcttgaccaacgaccggaagatt
atctggccagggggagaaaccgagaaacctcaaggctatcagatgtcaaccaaattgaag
atcgtgacgatccaccaagagccctttgtgtatgtgaagcccacgcaagcagatgggacg
tgcagggaggaattcaccatcaatggggatcctgtgaaaaaggtcttttgcactggaccc
aacgagaccatcccaggccgccccaccgtggcactgtgctgctatggattctgcatcgac
ctgctcatccggctggcaggggtgatgaacttcacctacgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggttaacaacagcaacaagaaagagtggaatgggatg
atgggggagctgctgagcggccaggcagacatgattgtggctcccctcaccatcaacaat
gagcgggcacagtacattgagttctccaagcccttcaagtaccaaggcctcaccatcctt
gtgaagaaggaaatcccccgaagcaccttggactcgttcatgcagcctttccagagcacg
ctgtggctgctggtggggctgtctgtgcacgtggtggcagtgatgttgtacctcttagac
cgattcagcccgtttggccggttcaaagtgaacagtgaggaggaggaggaagatgccctg
accctctcctcggccatgtggttctcctggggagtcctgctgaactccggcatcggagaa
ggtgctccccggagtttctctgcacgtattcttggcatggtgtgggctggcttcgccatg
atcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccggcctgag
gagagaattacaggcatcaacgacccccggctgcgcaacccctctgataagttcatctat
gccacggtgaagcagagctcggtggacatctacttccgaaggcaggtggagctgagcacc
atgtacaggcacatggagaagcacaactacgagagcgctgccgaagccatccaggcagtg
agggacaacaagctccacgccttcatctgggactcagcggtgctggagtttgaagcctcc
cagaagtgtgacctggtgacgacgggggagcttttcttccgctccggcttcgggattggg
atgcgcaaggacagcccgtggaagcagaacgtctccctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggaaaggtcacactcattggcacgaaagcaattggggaggaatcgttctcagcgccc
gccgccgagcgcggccggtcccctcggctcgctgcccccgcaccatggcggctggtgctc
ccagcctgcgctaaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaa
gccacttttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctcc
aaggatacgccctgcagaatggtccctcaggagtgccagagagacaggctggcaccatgg
agccaagacagccctgggaagctaccaccccactctgaacgtcctagcgcccaccatcac
ccgagctgcacagcctctccgcggcacatcatccccaccgccccaggaggagatgcatgt
gttccccataggcagctcctgcaactcgaatag
DBGET
integrated database retrieval system
