Chroicocephalus ridibundus (black-headed gull): 134523979
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Entry
134523979 CDS
T10910
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134523979 (CHD5)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134523979 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
134523979
NCBI-ProteinID:
XP_063209606
LinkDB
All DBs
Position
16:2520798..2552971
Genome browser
AA seq
1954 aa
AA seq
DB search
MRGPAAGRELLEDAENEEDVSEDDDGVLEGLEEFFAEEQVVVQKKKKSKKLKDGKAAKIK
RRKKEGSNDEMTDNEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDND
DGGLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVAVAPPLAASPQQSAVPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMGGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEDEEEGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPL
PPALPAPDAELALPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDK
KGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKHLYWNHRELMLGEDTRPLKKLNKKGK
KLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMVSQGQRIAMPDAVTPFSDSLSTKAGAATPGMKKKHGGTPPGDNKDVEDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGLESKKSSEIVSSDPNTPVPASPAHVH
TGPVALADKIETQLGFQEEKDQVEQKSRKVSDIQVPASAEKVESEEHPESCDSKEKPREE
KQEESEKAEPSPEPLVKDEGIQEKEKPLEKPELNSSPGKGEDKDVKPEEAKVEEKEHSEA
QQNGDKEEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDATVQQGSFGSS
QIYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggccggcggctggccgggagctgctggaggacgcggagaacgaggaggacgtc
tcggaagacgatgatggggtgctggaaggactggaagagtttttcgcagaagagcaagtg
gtcgtgcagaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagtaatgatgaaatgacagacaatgaagaggagattgaggag
aaatctgagagtgaagggagtgactattcccctaacaaaaagaaaaagaaaaaactgaag
gacaagaaggagaaaaagccgaaacggaagaagaaagatgaagaggaggatgacaatgac
gatggaggtctaaaggagcccaagagctcagcccagctgatggaggagtggggccttgat
gatgttgattatgttttctcagaagaagattatcatactctgactaattacaaggctttc
agccagttcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgaccgtgcttggtgctaaatggcgagagttcagtgccaacaacccgttcaagggcagt
tcggcagcagcggcagcagcggctgttgctgcagctgtagagaccgtcgccgttgccccg
ccgctcgctgccagcccccagcagtctgctgtgcccaccgtcatcaggaaggctaagacc
aaggagggcaagggtccaggcgtcaggaagaaaatcaagggctccaaagatggcaagaaa
aaggggaagggaaaaaagatgggaggcttgaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctctagcgaagaggaggaacgggaggaatctgactttgacagcgcc
agcatcaacagctcctcagtgcgctccgagtgctcggctggcctggggaagagagggaag
aggaggagaaagaaaaagaggatcgaagaaggggacgggtatgagacggaccaccaggac
tactgtgaggtgtgccagcagggaggggagatcattctgtgtgacacctgtcctcgcgcc
taccacctcgtctgcctggaccccgagctggagaaggcccctgagggcaagtggagctgc
ccccactgcgagaaggagggcatccagtgggagccgaaggaggaggaggaggatgaagag
gaaggcggcgaggaggaggaggatgaccacatggagttctgccgggtctgtaaggacgga
ggggagctactgtgctgcgacacctgcccgtcctcctaccacctccactgcctgaacccg
ccgctgccagaaataccaaacggtgaatggctctgccctcgctgtacatgccctcccttg
aagggcaaagtccagcgcatcctgcactgggcctggaaggagccgccggccgccccgctc
ccgcctgcactgcctgccccggatgcggagctggctctgcccccgccaaaggtgctggag
gggatcccggagcgcgagttcttcgtgaagtgggcaggcctgtcctactggcactgctcc
tgggtcaaggagctgcagctggagctctaccacaccgtcatgtaccgcaactaccaacgg
aagaacgacatggacgagccgccagcctttgactacggctctggggacgaggacagccag
agggagaagcggaagaacaaagacccgcagtacgccaagatggaggagaggttctaccgc
tacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagctttgataaa
aagggagacatccattacctgatcaagtggaaagacctgccgtacgaccagtgcacctgg
gagatcgatgagatagacatcccgtactacgaaaacctcaaacacctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaaaaaggggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacgcctcttgtggatcctacagtg
aagtttgacaagcagccgtggtacatcgatgccacgggaggcacgctccatccttaccag
ctggaagggctgaactggctgagattttcctgggcccaagggacagatacaatcctggcc
gacgagatggggctggggaagactgtgcagactattgtgttcttgtattccctgtacaag
gagggccactcgaaagggccgtatctggtcagcgcccctctctccaccatcatcaactgg
gagcgcgagttcgagatgtgggcacccgacttctatgtcgtgacctacacgggggacaaa
gaaagccggtcagtcatccgggaaaatgagttttcttttgaagacaacgccatccggagt
ggaaagaaggtcttccggatgaagaaggaagcccagatcaagttccacgtcctgctcacc
tcctatgagctgatcactattgaccaggcggtgctgggctccatagagtgggcctgtctg
gtggtggacgaagcgcacaggctgaagaacaaccagtccaaattctttagagtattaaat
agctacaaaatcgattacaagctgctgctcactgggactccgctccagaacaacctggaa
gagctcttccacctgctcaatttcctgactcccgagaggtttaataacctggagggcttc
ctggaggagtttgccgacatctccaaggaagatcagatcaaaaagctccatgatctgctg
ggtccccacatgctgcggcggctcaaggcagatgtgttcaagaacatgccggccaagaca
gagctgatcgtgagagtggagctgagccagatgcagaagaagtactacaaattcatactg
acgaggaatttcgaagccctgaattcgaagggtggtgggaaccaggtctcactgctcaac
atcatgatggacctgaagaagtgctgtaatcacccgtacctcttccctgtggcggcggtg
gaggccccagttctgcctaatggatcctacgatggcaattctttggtcaaatcttctggg
aaactgatgctgctccaaaagatgctgaagaagttgcgggatgggggtcacagagttctg
atcttctcccagatgacgaagatgctggacttgctggaggatttcctggagtacgaaggc
tacaagtacgagcggatagacgggggcatcaccggcggcctgcgccaggaggccatagac
aggtttaacgctcctggtgcccagcagttctgctttctcctctctacccgcgccggcggt
ctgggcataaaccttgctacggccgacacagtcattatttatgattctgactggaatccc
cacaatgacatccaggcattcagcagagctcaccgaatcgggcagaacaagaaggtgatg
atctatcgctttgtgacgagagcctctgttgaagagcgcatcacccaggtggccaaaagg
aagatgatgctcacccacctggtggtccgcccggggctcggctccaagtcgggctccatg
accaagcaagagctggacgacatcctcaagtttgggacagaagagctcttcaaggatgac
gtggaaggtatggtgtctcagggacagcggattgccatgccagatgctgtcacccctttc
tctgactcactgtcaaccaaagcgggtgcagcgactcccggcatgaaaaaaaagcacggt
ggcaccccaccaggtgacaataaggatgtggaggacagcagcgtgatccactacgacgac
gctgccatctctaagcttctggaccgaaaccaggatgcgactgatgacacggagctgcag
aacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtcagagaagaggac
ggtgtggaggaggtggaacgtgagatcatcaagcaggaggagaatgtggaccccgactac
tgggagaagctgctgcggcaccactatgagcagcagcaggaagatctggccaggaacctg
gggaaagggaagagaatccgcaagcaggtcaactacaacgacgcctcgcaggaggaccaa
gagtggcaggacgagctctccgacaaccagtcggagtactccatcggctctgaggatgag
gatgaagactttgaagagaggccagaaggtcagagtggcagaagacaatcccggaggcag
ctgaagagtgaccgggacaagcctctccctcctttgctggcgagagttggggggaatatc
gaggttctcggcttcaacgcccgacagcgcaaggctttcctgaacgccatcatgcgctgg
ggcatgccgccccaggacgccttcaactctcactggctggtccgggatctgcgagggaag
agtgagaaggagttcagggcgtacgtctccctcttcatgagacatttgtgtgagcctggg
gctgacggtgccgagacctttgcggacggtgtcccccgggaagggctgtcacggcagcac
gtgctgactcggataggagtcatgtcactagtaaggaagaaggtccaggagtttgagcat
gtcaacgggaagtacagcaccccagatctgattctcgagggcctggagagcaagaagtcc
agtgagattgtgtcttcagatcccaacacccccgtcccggccagcccagcacacgtgcac
acaggacctgtggcccttgcagacaaaatagaaacacaactcgggttccaggaggaaaag
gaccaagtggagcagaagtccaggaaagtgtctgacatccaggtgcctgcgagcgccgag
aaggtggaaagcgaagagcacccagaaagttgcgacagcaaagagaaaccaagggaagag
aagcaagaggagagtgaaaaggcagagccttctcctgagcccctggtgaaagatgagggg
attcaagagaaagagaagcctttggagaagccagagttgaacagcagcccaggaaaaggg
gaggacaaagatgtcaaaccagaggaggccaaggtggaggagaaggagcacagcgaggct
cagcaaaacggtgacaaagaggaagaggaggatggaaagaaggatgacagaaatgtgaac
ttccgattcatgttcaacattgctgacggtggctttacagagctgcacacgctgtggcag
aatgaggaaagggctgccatctcctctggcaagatctacgacatctggcaccgccgacat
gactactggcttttggcaggaattgtcacccatggctatgcccgctggcaggacatccag
aacgacccacgctacgtgatcctgaacgagcccttcaagtcggagatacacaaggggaac
tacctcgagatgaagaacaagttccttgcccggcggttcaagctgctggagcaggccctg
gtgatcgaggagcagctgcggagggctgcgtacctgaacatgacccaggaccccaatcac
ccggccatggcattgaacgcccgtctggctgaagtggagtgccttgccgagagccaccag
cacctctccaaagagtccctggctgggaacaagcccgcgaacgccgtcctgcacaaggtg
ctgaaccagctcgaggagctgctgagcgacatgaaggctgacgtgacgcgcttgccctcc
atgctgtcccgtatcccgcccgtggctgcccggctgcagatgtccgagaggagcatcctc
agccgtctggccacccgcgggggggacgccaccgtccagcagggctccttcggctcctcc
cagatctacaacaacaactttgggccaaatttccggggtcccgggccaggtgggattgtc
aactacagtcagatgcctctgggaccgtatgtgaccgatatttag
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integrated database retrieval system
