Chroicocephalus ridibundus (black-headed gull): 134524006
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Entry
134524006 CDS
T10910
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04120
Ubiquitin mediated proteolysis
crid04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134524006 (UBE4B)
04120 Ubiquitin mediated proteolysis
134524006 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134524006 (UBE4B)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134524006 (UBE4B)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
U-box type E3
134524006 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
134524006
NCBI-ProteinID:
XP_063209665
LinkDB
All DBs
Position
16:complement(6548146..6588863)
Genome browser
AA seq
1348 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRETPPGPPVVTPAPGPSHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLMGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSPD
RSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPTTNFTSFVPMTGSSLTPPASSV
ATTSVPSITVSSHLTATSPSWTQPSSPRYRPYTVAHSGGFSASSIPRSLNISIPSSSPSP
PAMAASPPAMPVIASRQRPTTMGPPLFTASPSTLRRHSSLLNRIPSSIYDNPFSLLLLAV
SDVSEDSSDEENEDDDFSCVQFGSSMGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECF
DRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLC
RNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAIASKECSLDSDNFKYPLMALCELCEI
KFGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSG
PAITLENTRVVSQSLQHYLELARQELFKILHSILLNGETREAALNYMAAIVNANMKKAQM
QTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIDLPTDETRVKATMEDV
AAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLK
NNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLM
LRILDPAYPNIKLPLTPEVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMF
LVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDT
TFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETV
DMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEI
VAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQT
LTENMLEPVPELKEQIQAWMRDKQNADH
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggatgagattcgtcgaaggcgccttgctcggttggcgggtgga
ccatcttcccagccaactacgccactcacgtcaccacagagagagaccccaccgggacca
cctgtagtgacaccagccccagggccatcccatagcctaggtctaaatgtccacagcatg
accccagctacctctccaatcggtgcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttcactcagcagttctccatctaacagccttgaaacacaatctcagtctctc
tctcgatctcagagcatggatattgatagtgtctcctgcgagaaaagtatgtcccaggtc
gatgtggattcaggaattgaaaacatggaggttgatgagaatgatcgcagagagaaaagg
agtctgacagataaggaacctctgtctgggtctgaagtatctgaggagcaagctttacag
ctggtctgtaagatcttcagagtctcttggaaggaccgagacagagacgttatcttcctg
aattcactctctgcccagttcaagcagaacccaaaggaagtgttttcagattttaaggac
ttgatggggcagattttgatggaagtgctgatgatgtccacgcagtcaagggatgaaaac
ccatttgctagcctgacagctacatcacaaccaattgcggcagctgcccgctctcctgac
agaagcctgattttaaacatgggctctaacccaggaagcagcccaatgttctgtaatgtg
ggctcctttggttccagttcattatccagtctctatgggactagtccagctcctactacc
aatttcacaagctttgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccactacatctgtgccttccattactgtcagctctcacctcacagcaacaagcccttct
tggacgcagccttcctctccgaggtaccggccatacaccgttgcccattctggaggcttt
tcagcttcttccatcccacgttccttgaatatttccatcccatctagttcaccaagtcct
ccagccatggctgctagccctccagccatgccagtcatcgcatccagacagagacccaca
acaatgggtccacctttgtttactgcttcacccagtaccttgcgcaggcattcttcttta
ctgaacaggattccttctagtatatacgacaaccctttctccctcctccttcttgccgtt
tctgatgtgtctgaggacagtagtgatgaagaaaatgaagatgatgatttttcttgtgtc
cagtttgggtccagtatgggaggctctggcagctcaagtgtttccgattcctgcagtgac
cacttcaccattgaaaattgtaaggagacagagatgctgaactacctcattgagtgtttt
gacagagttggaatagaggagagaaaagcaccaaagatgtgtagccagccaacagttagc
cagttactgagcaacatccgatcacaatgcatttctcatgctgctttggtgctacaggga
tccttaacacaaccaaggtcattgcagcagcagtctctgctggtaccgtatatgctgtgt
aggaatctcccatttggcttcatccaagaactggtgagaacaacttatcaggatgaagag
gtgttcaagcagatctttattcccatcttacaaggcctggctatagcttccaaagagtgt
tcccttgatagtgacaattttaaatacccccttatggcactatgtgaactttgtgaaatc
aagtttgggaaaacacaccctatgtgcagtttggttgtctctttgcccttgtggttgcct
aaatctttaagcacaggtgcaggaagagagctgcaaagactttcctatcttggagccttc
ttcagtctctccgtctttgctgaagatgataacaaagtagtcgaaaagtacttctcaggg
cctgcaattactcttgaaaacacccgagttgttagccagtctttgcaacattacctggaa
ttagctaggcaagagctgttcaagattctacacagtattttactgaatggtgaaactcga
gaagcggctctcaattacatggcagctattgtcaatgccaacatgaaaaaggcacaaatg
cagacagatgatcgtttggtatctacagatggctttatgctcaacttcttatgggtacta
cagcaactaagtacgaagataaagctggaaacggttgatcccatgtacatatttcatccc
aggtgtcgtattgacctcccaacagatgagacaagagtgaaagcaacaatggaggatgtt
gcagcctggatcgctgaactttacagggatccgtctccattctctgagccgaaattccca
acagaatgtttcttcctaaccctgcatgcccatcatctctcaatcttgccaagctgtcgt
cggtacatacgtagactgcgggccatcagggaactcaacaggactgttgaagatttgaaa
aacaatgaaagtcaatggaaggattctcctctggctaccaggcatcgagaaatgctgaag
cgttgcaagacacagcttaagaaactggtgaggtgcaaggcttgtgcggatgctggcttg
ctggatgaaaactttctcaggagatgcctgaatttctatggcatggtgattcagctgatg
cttcgcattcttgaccctgcctatcccaacataaaattgcctttaactcctgaagttccg
aaggtatttgcagcattgccagagttttacgtggaagatgttgctgaatttttatttttt
attgtacaatatgctcctcaggtgctttatgagccctgtactcaggacatagtgatgttc
cttgttgtgatgctgtgcaaccagaactacatccgaaatccttacttagtagccaagctg
gtggaagtgatgttcatgacaaatccagctgttcagccccggacgcaaaagttctttgaa
atgattgagaatcatcctctctccactaaattgttagtcccctccttgatgaagttttac
actgatgttgaacatactggagccactagtgaattctatgacaagtttacgatccgctac
cacatcagcactattttcaaaagcctctggcagaatatagctcaccatggtacatttatg
gaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaatgacaca
actttcttgctggatgagagtctggagtccctaaaacgtatccatgaagtgcaagaggag
atgaagaataaagaacaatgggacctgctgcccagggatcagcaacaggctcggcagtcg
cagctagctcaggatgagcgtgtgtctcgttcatatcttgccctggcaacagaaactgtt
gatatgttccatatccttaccaagcaggttcaaaagccttttctcagacctgaacttgga
ccgcgattggccgctatgttgaactttaacttacagcaactctgtggccccaagtgccgt
gacctgaaagtggaaaaccctgagaaatatgggtttgaaccaaagaagctgttggaccaa
ctgactgacatttatctacagctagattgtgctcgctttgctaaagcgattgctgatgat
cagaggtcctacagtaaagagctctttgaggaggttatctcaaagatgagaaaggctgga
atcaagtcaaccatagcaatagagaaattcaaactgctggcagagaaagtggaggaaatt
gttgccaagaatgcccgtgcagaaatcgattacagcgatgctccggatgaattcagagat
ccacttatggacactctcatgactgatcccgtgaggttgccatctggaactattatggac
aggtcaatcatcctgaggcatctgttgaactcttccactgatcctttcaatcgccagacg
ctgacagaaaatatgctggaaccagtgccagaacttaaagagcaaatccaagcctggatg
agagacaagcagaatgctgaccattaa
DBGET
integrated database retrieval system
