Chroicocephalus ridibundus (black-headed gull): 134524094
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Entry
134524094 CDS
T10910
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03013
Nucleocytoplasmic transport
crid03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134524094
03015 mRNA surveillance pathway
134524094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134524094
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134524094
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134524094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
134524094
NCBI-ProteinID:
XP_063209843
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All DBs
Position
16:8878198..8890706
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AA seq
479 aa
AA seq
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MATDSWALAVDEQEAAAESLSSLHLKEEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLEGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKITN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcctgggccctggccgtggacgagcaggaggcggcggccgagtcgttg
agcagtttacacctgaaggaggaaaaaaccaaaccagatgccaatggtgctgttgtcaag
gcagacgacaacgtagagaagacggaggatgaggagaaggaggacagagcagcccagtcc
ttgttgaacaagctaattcgaagtaacttggttgacacaacaaatcaagtggaggtgctg
cagagggatcccacatcgcctctctactccgtgaagtcttttgaggagctgcgactgaaa
ccacagctcctggaaggagtctatgccatgggcttcaacagaccatctaagatacaagag
aatgccctgcccatgatgcttgctgaacccccacagaacttgatcgcacaatctcagtct
ggtactggcaagacagctgcctttgtcctggccatgctcagtcgtgttgaacccgggaac
aagtatccacagtgtttgtgcctttccccaacatatgagctggcacttcaaacaggaaaa
gtgattgagcagatgggaaagttttatccagagctgaaacttgcctatgctgtccgaggc
aataaattggagagaggtcagaagatctccgagcagattgtaatcggcacacccggcact
gtgctggactggtgttccaaactgaaattcatagatcccaagaaaatcaaagtgtttgtc
ttggatgaggctgatgtgatgatagcaacccagggccatcaggatcagagcatccgcatt
cagagaatgctccccagggactgccagatgcttctgttttcagccacttttgaggattct
gtgtggaaatttgctcaaaaagttgttcctgacccaaacattatcaaactgaagcgagag
gaggagacactggacactattaagcagtattacgttctgtgcaataacagagatgagaag
ttccaggctctctgtaatatctatggcgctatcaccattgcccaggccatgatcttctgc
catactcggaagacggctggctggctggcggcagagctctcaaaggagggccatcaggtg
gcattgctcagtggggaaatgatggtggaacagagagccgcggtgatcgagcgtttccga
gagggcaaagaaaaggtgctggtgaccacaaacgtctgtgccagagggatcgatgtagag
caagtctctgttgtcatcaattttgaccttcctgtggataaagatggaaatccagataac
gagacttatctgcaccggatcggacgcacaggtcgctttggcaagcgaggactggctatt
aacatggtggacagcaaacacagcatgaatattctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgacgacttggatgaaattgagaagataactaactga
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