Chroicocephalus ridibundus (black-headed gull): 134524367
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Entry
134524367 CDS
T10910
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03040
Spliceosome
Brite
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134524367 (DDX42)
Spliceosome [BR:
crid03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
134524367 (DDX42)
Complex B
134524367 (DDX42)
Complex C
U2 SnRNP specific factors
134524367 (DDX42)
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Other DBs
NCBI-GeneID:
134524367
NCBI-ProteinID:
XP_063210419
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Position
17:complement(4758683..4777911)
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AA seq
953 aa
AA seq
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MNWNKGGPGTKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVELPYIPAENSPTRQQFHSKSADSDSDDDPLEAFM
AEVEDQAARDMKRLEDKDKEKKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKV
ISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENSDRGNNNSVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLNNQ
KTGSSAAGASGWTSAGSLNSVPTSSAQQNAANPDSPIAATAAAKGVPGFTSTGNLSSVPT
FPSVGVQGFNNTNASTNNREGIGSSSTGVAAAGGGGGGGSSGSGGGGGGGGGIVRERYND
NRNSRHNEIPRRGEGGGRYNDVQRHGEGGGRHSDAYRHGEGRHGDNHRHGESRHFADVGS
GNRNNGDSRNSNEGRNNENRNGENRKDANSRDNKTDGFAVPEPPKRKKSRWDS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaataaaggtggacctgggactaagagaggctttgggtttggtggatttgcc
ataacacctgggaaaaaagaggagcctaagctctctcaacagtctcatagtgcttttgga
acagccggttcttctgctgcatttgcgaaatcaggacctcctcagctgccttctttctac
aaaattgggtcaaagcgagcaaattttgatgaagagaatgcgtactttgaggatgaagag
gaagattccagcaatgttgaattgccgtacattcccgcagagaattcccccactcgccag
cagtttcattccaaatcagcagactctgacagcgatgatgatcctctggaggcattcatg
gctgaagtggaggatcaagctgctcgagacatgaagagacttgaagacaaagacaaggaa
aaaaagaatgttaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgctacatggctgaaaaccccactgctggtgtggtccaagaagaggaagaggataac
ctggagtatgacagtgatgggaatccaattgcgccgtccaagaaaatcattgatcctctt
ccacctattgaccattcagagatcgaatacccaccgtttgagaaaaatttctatgatgag
catgaggagatcaccagtctcaccccgcagcaagtggtggagttacgtcataagctaaat
ctccgggtctccggtgccgctcctccaaggcctggcagtagttttgcgcattttgggttt
gatgagcaacttatgcatcaaattaggaaatctgagtatacccagcccactcctatacag
tgtcagggtgttccagttgcactaagtggcagagatatgattgggatagctaagactgga
agcggaaaaacagcagccttcatctggccgatgttgattcacatcatggatcaaaaggag
cttgaaccgggggatggtcccattgcagtgatcgtatgcccgaccagagagctttgccaa
cagatccattctgaatgtaagcgcttcggtaaggcatataatctacgctctgtagctgtg
tatggaggaggaagcatgtgggagcaagccaaagccctccaggagggagcagagatagtt
gtctgcacaccaggtcgtttaattgatcatgtgaaaaagaaagctacaaaccttcagaga
gtcacttaccttgtgtttgatgaagctgacagaatgtttgatatgggttttgaatatcag
gtcagatcaattgcaagccacgtacgtcctgacagacagaccctcttgttcagtgccact
ttccgtaagaagattgagaaattggcccgagacattctgatcgacccaattcgagttgtg
cagggagacattggggaggcaaatgaagatgttactcaaattgtggagattttcccctct
ggccctagcaaatggaactggctgactcgacgcctcgtggagttcacatcttctgggagc
gttctcctctttgtcaccaagaaggcaaatgcagaagagctggccaataatcttaagcag
gaggatcataatctggggctgcttcatggtgacatggaccagagtgagaggaataaagtc
atttcagaatttaagaaaaaggggatcccaatactggtagctactgatgtggcagctcgt
gggttagatattccttccattaagactgtcatcaattacgatgtggctcgggacatagat
acgcacacccatagaattggtcgtactggcagagcaggcgagaagggagttgcctacact
ctgctgactcccaaagacagtaactttgctggtgatcttgtcagaaatctggaaggtgct
aatcaacatgtttccaaagagctgttggatctagcaatgcagaatccatggttccggaaa
tcacgtttcaaaggaggaaaaggcaagaagctgaatattggtggtggtggcttaggatac
cgtgaacgtcctggtctgggatcagaaaattctgaccgtggaaacaacaacagtgtgatg
agtaactatgaggcatacaagccatccaccggggcaatgggagacagacttacagcaatg
aaagcagcttttcagtcccagtataagagccactttgttgccgcaagcttaaataatcaa
aagactggtagctccgctgctggtgctagtggctggaccagcgctgggagcttgaactca
gtaccgacgagttcagcacagcaaaatgctgcaaatcctgacagcccgattgcagccacc
gcagcagcaaagggtgttccaggtttcaccagcacggggaatttgagtagcgttcccact
tttccaagcgtcggagtacagggcttcaacaacaccaatgccagcaccaacaatcgagaa
ggcatcggcagcagcagcaccggcgttgctgccgctggcggcggtggtggcggtggcagc
agcggcagtggtggtggtggtggtggcggcggcggcattgtcagagaacgctacaacgac
aaccggaacagtcgccacaatgagatcccgcgccgcggagagggtggtggtcgctacaat
gatgtgcaacgccatggagaaggaggcggtcgccacagtgacgcttaccgccacggagag
ggccgacacggcgacaaccatcgccacggtgaaagccggcacttcgctgatgtgggcagt
ggcaatcgcaataatggtgatagcaggaatagcaacgaaggtaggaacaacgagaacagg
aatggtgagaacaggaaggatgccaacagccgagacaacaagacagatggttttgctgtc
ccagagcccccaaaacgtaagaagagccggtgggacagttaa
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